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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000006.1:361045..362997+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_211648-T1 ID=ASPNIDRAFT_211648-T1|Name=ASPNIDRAFT_211648-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1953bp|location=Sequence derived from alignment at ACJE01000006.1:361045..362997+ (Aspergillus niger ATCC 1015)
GTCGAGTGTTCACCCACGCTTTTCATCGCCGCCTCCCCCCCAACCCTCAC
CATGAATCGCCTGGGCAGACTGTCTCTGCCGCTACGGCCTCAAGTTTGTC
TGCTCTGTCAGACGCAGGCGACCATGTCCTCTCCTCTCGCCGGATGGCAG
GCCGTCCGCTCCATGGCAACCGTCCGACAGCGCCGCCAGGCCGCCCGCAT
GGTTCTGTCCTCCAATGTCGACAAATCCTCCCTGAAGCAAGGACGTTCGA
AGAGAGATCGTGCCGGCCCCTGGTCCGGCATGAACCAGACGGAGGCGCGC
CTTCGGGATGCGCCACGGTCAAGGTCTCGGGCAGCTCTCAAACGCTCGGG
TGATTCCGAAGATGATAAGCAGAAGCCGGACAGTCCTCTCTACAAGGCGC
TCAAGATGCAGACGGCATTGGCGCCCATTCCTTACGGTCGCCGAACCGCC
ATCAAGAACAAGATCGCAGAAGTTTCGAGTTTCGACCAGTTTCCTCTGCT
ACCGGTCGTGCGCCACTCGATCTCTTCCCAAGCTCTTCCCGGACTGGCGG
ACATTGTACCGACTCCCATTCAACGCCTTGCTATCCCACAACTCCTGAAA
GACCCTATCCCGAAGAGAACATCTAAAGACGTCTCAGACCATGAACCGAA
TATTGAACAGTACCTTCTGGCCGCCGAGACCGGGTCGGGAAAGACGCTCG
CCTATCTGATTCCCTTGATCGACTCCCTGAAGCGTATGGAAGTGGAGGAC
AAGGAATTCGAGAAGTGGGAGGCAGAACAAAAAGCCAAGGAGCGGGAGGA
GAAGCTCAAAAACCGGGCTTTCGACATTGAACCGGAAGAGGCTCCGTTGT
CGGACGCAGGTAGACCGCGGGTCATTATCCTCGTCCCGACCTCCGAGTTG
GTTGCCCAGGTTGGCGCCAAAGTCAAGGCTCTTTCGCACACGGTCAAGTA
CCGGTCGGGGATGATCTCGTCCAACCTGACCCCTCGTCGGATCAAGAGCA
TCCTCTTCAACCCGAGCGGGATTGATATTCTCGTCGCCACTCCCCACCTG
CTTGCCTCGATCGCCAAGACGGATCCATATGTGCTGAGTCGCGTCAGCCA
CCTGGTGCTGGATGAGGCGGACTCGCTCATGGATCGGTCCTTCTTGCCTA
CAACGACTGAGATCATTGAAAAGTCAGCCTCTTCTCTTCACAAGCTCATC
CTCTGCTCCGCCACCATTCCCCGCAGTCTCGACAACCTCCTCCGCAAGCG
TTACCCCGACATCCGACGACTGACGACGCCAAACCTGCATGCTATCCCCC
GTCGCGTCCAGCTCGGAGTGGTGGACATCCAACGGGACCCCTACCGTGGC
AACCGCAGCCTGGCCTGCGCCGACGTGATCTGGTCCATCGGAAAGGCAGG
CGACACAGAACCGACGCACCCTTTCCTGGCCCAGGCCGGACCCAAGGTCA
AGAAGATCCTAGTCTTTGTCAACGAGCGTGAAGAAGCCGACGAGGTAGCC
CAGTTCCTGCGCTCAAAGGGCATCGACGCCCAGTCCTTCTCCCGGGACTC
CAGCAGCCGCAAGCAAGAAGAGCTGCTTGAAGAATTCACCGAGTCCCCGA
TCCCTCCCACCGCAGAGGAGATCATGCTGGCCAAGAACAAGCGCCGCCAG
GACAACTCCATTCCCTTTGTCTTCCCCGAACAGCAGAACAAGCCGGGCGC
GGAGCGCGGCCTCCCGAACACCAAGGTTCTCGTGACGACGGATATTGCCT
CTCGCGGAATTGACACCATCGCCGTCAAGACGGTCATCCTCTACCACGTC
CCACACAACACGATCGACTTCATCCACCGACTCGGCCGTCTCGGTCGCAT
GGGCAAGCGTGGCCGAGCCGTGGTCTTGGTCGGCAAGAAGGACCGCAAGG
ACGTGGTCAAGGAAGTGCGCGAGGGCATGTTCCGCGGCCAGGCCTTGATT
TAG back to topCoding sequence (CDS) from alignment at ACJE01000006.1:361045..362997+ >ASPNIDRAFT_211648-T1 ID=ASPNIDRAFT_211648-T1|Name=ASPNIDRAFT_211648-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1902bp|location=Sequence derived from alignment at ACJE01000006.1:361045..362997+ (Aspergillus niger ATCC 1015)
ATGAATCGCCTGGGCAGACTGTCTCTGCCGCTACGGCCTCAAGTTTGTCT
GCTCTGTCAGACGCAGGCGACCATGTCCTCTCCTCTCGCCGGATGGCAGG
CCGTCCGCTCCATGGCAACCGTCCGACAGCGCCGCCAGGCCGCCCGCATG
GTTCTGTCCTCCAATGTCGACAAATCCTCCCTGAAGCAAGGACGTTCGAA
GAGAGATCGTGCCGGCCCCTGGTCCGGCATGAACCAGACGGAGGCGCGCC
TTCGGGATGCGCCACGGTCAAGGTCTCGGGCAGCTCTCAAACGCTCGGGT
GATTCCGAAGATGATAAGCAGAAGCCGGACAGTCCTCTCTACAAGGCGCT
CAAGATGCAGACGGCATTGGCGCCCATTCCTTACGGTCGCCGAACCGCCA
TCAAGAACAAGATCGCAGAAGTTTCGAGTTTCGACCAGTTTCCTCTGCTA
CCGGTCGTGCGCCACTCGATCTCTTCCCAAGCTCTTCCCGGACTGGCGGA
CATTGTACCGACTCCCATTCAACGCCTTGCTATCCCACAACTCCTGAAAG
ACCCTATCCCGAAGAGAACATCTAAAGACGTCTCAGACCATGAACCGAAT
ATTGAACAGTACCTTCTGGCCGCCGAGACCGGGTCGGGAAAGACGCTCGC
CTATCTGATTCCCTTGATCGACTCCCTGAAGCGTATGGAAGTGGAGGACA
AGGAATTCGAGAAGTGGGAGGCAGAACAAAAAGCCAAGGAGCGGGAGGAG
AAGCTCAAAAACCGGGCTTTCGACATTGAACCGGAAGAGGCTCCGTTGTC
GGACGCAGGTAGACCGCGGGTCATTATCCTCGTCCCGACCTCCGAGTTGG
TTGCCCAGGTTGGCGCCAAAGTCAAGGCTCTTTCGCACACGGTCAAGTAC
CGGTCGGGGATGATCTCGTCCAACCTGACCCCTCGTCGGATCAAGAGCAT
CCTCTTCAACCCGAGCGGGATTGATATTCTCGTCGCCACTCCCCACCTGC
TTGCCTCGATCGCCAAGACGGATCCATATGTGCTGAGTCGCGTCAGCCAC
CTGGTGCTGGATGAGGCGGACTCGCTCATGGATCGGTCCTTCTTGCCTAC
AACGACTGAGATCATTGAAAAGTCAGCCTCTTCTCTTCACAAGCTCATCC
TCTGCTCCGCCACCATTCCCCGCAGTCTCGACAACCTCCTCCGCAAGCGT
TACCCCGACATCCGACGACTGACGACGCCAAACCTGCATGCTATCCCCCG
TCGCGTCCAGCTCGGAGTGGTGGACATCCAACGGGACCCCTACCGTGGCA
ACCGCAGCCTGGCCTGCGCCGACGTGATCTGGTCCATCGGAAAGGCAGGC
GACACAGAACCGACGCACCCTTTCCTGGCCCAGGCCGGACCCAAGGTCAA
GAAGATCCTAGTCTTTGTCAACGAGCGTGAAGAAGCCGACGAGGTAGCCC
AGTTCCTGCGCTCAAAGGGCATCGACGCCCAGTCCTTCTCCCGGGACTCC
AGCAGCCGCAAGCAAGAAGAGCTGCTTGAAGAATTCACCGAGTCCCCGAT
CCCTCCCACCGCAGAGGAGATCATGCTGGCCAAGAACAAGCGCCGCCAGG
ACAACTCCATTCCCTTTGTCTTCCCCGAACAGCAGAACAAGCCGGGCGCG
GAGCGCGGCCTCCCGAACACCAAGGTTCTCGTGACGACGGATATTGCCTC
TCGCGGAATTGACACCATCGCCGTCAAGACGGTCATCCTCTACCACGTCC
CACACAACACGATCGACTTCATCCACCGACTCGGCCGTCTCGGTCGCATG
GGCAAGCGTGGCCGAGCCGTGGTCTTGGTCGGCAAGAAGGACCGCAAGGA
CGTGGTCAAGGAAGTGCGCGAGGGCATGTTCCGCGGCCAGGCCTTGATTT
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | RNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000006.1 | supercontig | ACJE01000006.1:361045..362997 + |
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