You are here

Home

ASPNIDRAFT_211828-T1, ASPNIDRAFT_211828-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_211828-T1
Unique NameASPNIDRAFT_211828-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:407059..408374+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_211828-T1 ID=ASPNIDRAFT_211828-T1|Name=ASPNIDRAFT_211828-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1316bp|location=Sequence derived from alignment at ACJE01000020.1:407059..408374+ (Aspergillus niger ATCC 1015)
GACAAGTAACATTGTCAATCGCCCTGCTTCTACTTCTCCCTAAACCAAAA
CCACACCATCCATCATGGTCCGTCTCAGCAATCTCGTGAGCTGCCTCGGC
CTGGCCTCCGCGGTCACCGCAGCAGTGGTCGATCTCGTCCCCAAGAACTT
CGACGACGTCGTCCTCAAGTCCGGCAAGCCCGCTCTGGTTGAATTCTTCG
CTCCCTGGTGCGGCCACTGCAAGAACCTCGCGCCCGTGTATGAAGAGCTG
GGCCAGGCATTCGCCCATGCCTCCGACAAGGTCACCGTCGGCAAGGTTGA
TGCGGACGAGCACCGCGACTTGGGCCGCAAGTTCGGTGTCCAGGGATTCC
CCACGCTAAAGTGGTTCGACGGAAAGAGTGACGAGCCGGAGGATTACAAG
GGTGGTCGTGATTTGGAGAGTCTGTCTTCGTTCATCTCTGAGAAGACGGG
CGTCAAGCCCCGTGGTCCTAAGAAGGAGCCCAGCAAGGTGGAGATGCTGA
ACGACGCGACTTTCAAGGGCGCTGTTGGTGGCGATAATGATGTTCTGGTT
GCGTTCACCGCGCCGTGGTGTGGACGTGAGTATCCTCGTTTCATCGTTCC
CGCTCTAGAAGCAAATCACTAACTACGGCCTTTTAAAACAGACTGCAAGA
ACCTCGCTCCTACCTGGGAAGCCCTGGCCAACGACTTCGTCCTCGAGCCC
AACGTTGTGATCGCCAAGGTCGACGCCGACGCTGAGAACGGCAAGGCCAC
CGCCAGAGAGCAGGGCGTGTCCGGATACCCCACCATCAAGTTCTTCCCCA
AGGGCTCTACGGAATCTGTTCCCTATGAGGGTGCCCGCTCTGAGCAGGCC
TTCATTGACTTCCTCAACGAGAAGACCGGCACCCACCGTACCGTTGGCGG
CGGACTCGACACCAAGGCCGGCACCATTGCTAGCCTGGACGAGCTGATTG
CCAGCACTTCTGCTGCTGACCTGGCCGCCGCGGTCAAGAAGGCTGCTACG
GAGCTTAAGGACAAGTACGCTCAGTACTACGTCAAGGTTGCGGACAAGCT
GAGCCAGAACGCCGAGTATGCCGCTAAGGAGCTTGCTCGTCTGGAGAAGA
TCCTGGCCAAGGGTGGATCGGCCCCTGAGAAGGTGGATGACCTTATCTCC
CGCAGCAACATCCTTCGCAAGTTTGTTGGTGAGGAGAAGGAGGCCAAGGA
TGAGCTGTAGATATTGTATGGATTATGACTTGTTTAGCTAGGGTATAGGC
ACCTAGTTTCTGTTACTCTGTATGATATCAAGAGGCAGTTATGAGAATGC
TATCGATGCGAACAGT
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:407059..408374+

>ASPNIDRAFT_211828-T1 ID=ASPNIDRAFT_211828-T1|Name=ASPNIDRAFT_211828-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2160bp|location=Sequence derived from alignment at ACJE01000020.1:407059..408374+ (Aspergillus niger ATCC 1015)
ATGGTCCGTCTCAGCAATCTCGTGAGCTGCCTCGGCCTGGCCTCCGCGGT
CACCGCAGCAGTGGTCGATCTCGTCCCCAAGAACTTCGACGACGTCGTCC
TCAAGTCCGGCAAGCCCGCTCTGGTTGAATTCTTCGCTCCCTGGTGCGGC
CACTGCAAGAACCTCGCGCCCGTGTATGAAGAGCTGGGCCAGGCATTCGC
CCATGCCTCCGACAAGGTCACCGTCGGCAAGGTTGATGCGGACGAGCACC
GCGACTTGGGCCGCAAGTTCGGTGTCCAGGGATTCCCCACGCTAAAGTGG
TTCGACGGAAAGAGTGACGAGCCGGAGGATTACAAGGGTGGTCGTGATTT
GGAGAGTCTGTCTTCGTTCATCTCTGAGAAGACGGGCGTCAAGCCCCGTG
GTCCTAAGAAGGAGCCCAGCAAGGTGGAGATGCTGAACGACGCGACTTTC
AAGGGCGCTGTTGGTGGCGATAATGATGTTCTGGTTGCGTTCACCGCGCC
GTGGTGTGGACACTGCAAGAACCTCGCTCCTACCTGGGAAGCCCTGGCCA
ACGACTTCGTCCTCGAGCCCAACGTTGTGATCGCCAAGGTCGACGCCGAC
GCTGAGAACGGCAAGGCCACCGCCAGAGAGCAGGGCGTGTCCGGATACCC
CACCATCAAGTTCTTCCCCAAGGGCTCTACGGAATCTGTTCCCTATGAGG
GTGCCCGCTCTGAGCAGGCCTTCATTGACTTCCTCAACGAGAAGACCGGC
ACCCACCGTACCGTTGGCGGCGGACTCGACACCAAGGCCGGCACCATTGC
TAGCCTGGACGAGCTGATTGCCAGCACTTCTGCTGCTGACCTGGCCGCCG
CGGTCAAGAAGGCTGCTACGGAGCTTAAGGACAAGTACGCTCAGTACTAC
GTCAAGGTTGCGGACAAGCTGAGCCAGAACGCCGAGTATGCCGCTAAGGA
GCTTGCTCGTCTGGAGAAGATCCTGGCCAAGGGTGGATCGGCCCCTGAGA
AGGTGGATGACCTTATCTCCCGCAGCAACATCCTTCGCAAGTTTGTTGGT
GAGGAGAAGGAGGCCAAGGATGAGCTGTAGATGGTCCGTCTCAGCAATCT
CGTGAGCTGCCTCGGCCTGGCCTCCGCGGTCACCGCAGCAGTGGTCGATC
TCGTCCCCAAGAACTTCGACGACGTCGTCCTCAAGTCCGGCAAGCCCGCT
CTGGTTGAATTCTTCGCTCCCTGGTGCGGCCACTGCAAGAACCTCGCGCC
CGTGTATGAAGAGCTGGGCCAGGCATTCGCCCATGCCTCCGACAAGGTCA
CCGTCGGCAAGGTTGATGCGGACGAGCACCGCGACTTGGGCCGCAAGTTC
GGTGTCCAGGGATTCCCCACGCTAAAGTGGTTCGACGGAAAGAGTGACGA
GCCGGAGGATTACAAGGGTGGTCGTGATTTGGAGAGTCTGTCTTCGTTCA
TCTCTGAGAAGACGGGCGTCAAGCCCCGTGGTCCTAAGAAGGAGCCCAGC
AAGGTGGAGATGCTGAACGACGCGACTTTCAAGGGCGCTGTTGGTGGCGA
TAATGATGTTCTGGTTGCGTTCACCGCGCCGTGGTGTGGACACTGCAAGA
ACCTCGCTCCTACCTGGGAAGCCCTGGCCAACGACTTCGTCCTCGAGCCC
AACGTTGTGATCGCCAAGGTCGACGCCGACGCTGAGAACGGCAAGGCCAC
CGCCAGAGAGCAGGGCGTGTCCGGATACCCCACCATCAAGTTCTTCCCCA
AGGGCTCTACGGAATCTGTTCCCTATGAGGGTGCCCGCTCTGAGCAGGCC
TTCATTGACTTCCTCAACGAGAAGACCGGCACCCACCGTACCGTTGGCGG
CGGACTCGACACCAAGGCCGGCACCATTGCTAGCCTGGACGAGCTGATTG
CCAGCACTTCTGCTGCTGACCTGGCCGCCGCGGTCAAGAAGGCTGCTACG
GAGCTTAAGGACAAGTACGCTCAGTACTACGTCAAGGTTGCGGACAAGCT
GAGCCAGAACGCCGAGTATGCCGCTAAGGAGCTTGCTCGTCTGGAGAAGA
TCCTGGCCAAGGGTGGATCGGCCCCTGAGAAGGTGGATGACCTTATCTCC
CGCAGCAACATCCTTCGCAAGTTTGTTGGTGAGGAGAAGGAGGCCAAGGA
TGAGCTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0016853isomerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211828ASPNIDRAFT_211828Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211828-T1.utr5p1ASPNIDRAFT_211828-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211828-T1.exon1ASPNIDRAFT_211828-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_211828-T1.exon2ASPNIDRAFT_211828-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211828-T1.cdsASPNIDRAFT_211828-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211828-T1.utr3p1ASPNIDRAFT_211828-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211828-T1ASPNIDRAFT_211828-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR017937
DBxrefInterPro:IPR011679
DBxrefInterPro:IPR013766
DBxrefInterPro:IPR036356
DBxrefInterPro:IPR005788
DBxrefPFAM:PF13098
DBxrefPFAM:PF00085
DBxrefPFAM:PF07749
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:407059..408374 +
Powered by Drupal