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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000020.1:645028..645872- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_211901-T1 ID=ASPNIDRAFT_211901-T1|Name=ASPNIDRAFT_211901-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=845bp|location=Sequence derived from alignment at ACJE01000020.1:645028..645872- (Aspergillus niger ATCC 1015)
CTCAGCTTCAAGTCGCCTTTACTTCGTTTTTCACCCAACGTATCATCGAC
TATCACCATCATGGCGAAGAAGGCATTGGCCAAGGACCAGATTGTGAAGC
TCATTGTGGGCGCCGGTCAGGCCAGTCCCAGTCCTCCCGTCGGTCCGGCC
CTGGGTAGTAAGGGTGTGAAGAGTATGGACTTTTGTAAGGTGAGCTGAAA
GAACACTCCATTGACTGCTTTAAATCGGATCCGTCATTTGCAAGACGTCC
AATTGGAGCTATCTGAAGTAGAAGAACGCGCAAGGCTCATATGGTTTACT
GTAGGAATTCAACGCCAGAACTGCACACATCAACACCGGTGTACCCATTC
CTGCGCGTGTCACTGTCCGACCCGACCGTTCCTTCACCTTCGACCTCCGT
ACTCCCACTACCACCTATCTGCTGTTGCAAGCGGCCAACGTGGAACCTCG
CAAGAATCGCATCCGTGGCGCCCAGAACCCGGGCCATGAGTTCATCGGCA
AGATATCCCTCAAGCATGTCTACGAAATCGCCAAGATCAAGCACTCCGAG
ACGCGACTGTCTGGACTGAGCCTGCAGGGATTGTGCAAGAGTGTCATTGC
CCAGGCCAAATCCGTCGGCATCCAGGTTGTCCCATGAGATTATTGCGGAG
CGGGCGATTGGTGATGTCGTTGTACACTATCTTGTGCCCTTACTCTCGTA
AGGTTACTCCTCTTCTTCTCTTGGGCTTACGAAATTGGCGTTATGTGGAA
CTGGGTTTGTTACCATCTGTATCATAGGCATTGCATGTTGTATAGAGAGC
GTTGGCTGGTGCCTCAAGCGATCACATGAAGTGGATTTGACTTCC back to topCoding sequence (CDS) from alignment at ACJE01000020.1:645028..645872- >ASPNIDRAFT_211901-T1 ID=ASPNIDRAFT_211901-T1|Name=ASPNIDRAFT_211901-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=924bp|location=Sequence derived from alignment at ACJE01000020.1:645028..645872- (Aspergillus niger ATCC 1015)
GAATTCAACGCCAGAACTGCACACATCAACACCGGTGTACCCATTCCTGC
GCGTGTCACTGTCCGACCCGACCGTTCCTTCACCTTCGACCTCCGTACTC
CCACTACCACCTATCTGCTGTTGCAAGCGGCCAACGTGGAACCTCGCAAG
AATCGCATCCGTGGCGCCCAGAACCCGGGCCATGAGTTCATCGGCAAGAT
ATCCCTCAAGCATGTCTACGAAATCGCCAAGATCAAGCACTCCGAGACGC
GACTGTCTGGACTGAGCCTGCAGGGATTGTGCAAGAGTGTCATTGCCCAG
GCCAAATCCGTCGGCATCCAGGTTGTCCCATGAATGGCGAAGAAGGCATT
GGCCAAGGACCAGATTGTGAAGCTCATTGTGGGCGCCGGTCAGGCCAGTC
CCAGTCCTCCCGTCGGTCCGGCCCTGGGTAGTAAGGGTGTGAAGAGTATG
GACTTTTGTAAGGAATTCAACGCCAGAACTGCACACATCAACACCGGTGT
ACCCATTCCTGCGCGTGTCACTGTCCGACCCGACCGTTCCTTCACCTTCG
ACCTCCGTACTCCCACTACCACCTATCTGCTGTTGCAAGCGGCCAACGTG
GAACCTCGCAAGAATCGCATCCGTGGCGCCCAGAACCCGGGCCATGAGTT
CATCGGCAAGATATCCCTCAAGCATGTCTACGAAATCGCCAAGATCAAGC
ACTCCGAGACGCGACTGTCTGGACTGAGCCTGCAGGGATTGTGCAAGAGT
GTCATTGCCCAGGCCAAATCCGTCGGCATCCAGGTTGTCCCATGAATGGC
GAAGAAGGCATTGGCCAAGGACCAGATTGTGAAGCTCATTGTGGGCGCCG
GTCAGGCCAGTCCCAGTCCTCCCGTCGGTCCGGCCCTGGGTAGTAAGGGT
GTGAAGAGTATGGACTTTTGTAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265BG5 |
| DBxref | InterPro:IPR036769 |
| DBxref | InterPro:IPR036796 |
| DBxref | InterPro:IPR020783 |
| DBxref | InterPro:IPR020784 |
| DBxref | InterPro:IPR006519 |
| DBxref | InterPro:IPR000911 |
| DBxref | PFAM:PF03946 |
| DBxref | PFAM:PF00298 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000020.1 | supercontig | ACJE01000020.1:645028..645872 - |
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