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ASPNIDRAFT_211915-T1, ASPNIDRAFT_211915-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_211915-T1
Unique NameASPNIDRAFT_211915-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:679972..681204-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_211915-T1 ID=ASPNIDRAFT_211915-T1|Name=ASPNIDRAFT_211915-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1233bp|location=Sequence derived from alignment at ACJE01000020.1:679972..681204- (Aspergillus niger ATCC 1015)
ATGACGAATATAAAATATTTCTCATTCAGCCAAATACTAGATTGTCCAAA
ATCTCAAATCCCATTTAGTTAAATTATCTTCAGGACCTTTTTCAAAATAT
CCGACCAAAAACCACACCCAAACCTCACTACGGCACCCGACGCGGCCAAC
CGCGCAATTTCACGTTTGCTCCCGACGAACTTTCCGCCGGGCATATCAAA
TCAATCTTCCCTCCGAATATCACAACCCTCCCTCCCCGTCACCACTTTCC
ACACATTAGTCGGACACATTCAATTAACCCAAAATGGTCCGACGATTCTC
CAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCGGCGCCTCTCT
CCCAACGGAAGCAGATCTTCCTGTACGCCATCCTATACTTTCCATACCAA
ACCTTTTTCTATTCAATCCCCTACCAATAACAAGTACTAGATAACTGACA
ATCTGAAATCACTGATATAGTCCCGACTTCACAATCGCCCTAATCCGCAC
GCCCTTCCTTCCCCCCCGCTACGCCACCTTCTACGTGCCGCTCAACTTCA
ACAAACTGGATATGCGCGATTACCTGCAGCGTCTGTACGGCGTGGGCGTC
GTCAGCGTGCGCTCATTCGTCGAACAGCAGAAACTGACGAGGTTGAAGTC
CCTGGGTCGCTATGGATATGGAAAGATCCGTCGCCCGCAGTCTAAGAAGA
AGATGACGGTCGAGATGAAGGAGGCGTTTGTTTGGCCCGAGGCGCCGACG
GATATGGCTCCGTATGTTATCTTCTCTATGTATCTGTTTGATATTGTTGT
TGTTGTTGTTGTTGTCATTGTTGTTGAAGGATTGGTGGGTTGTGGAAACA
ATGCTGACAATATGGGTGTTTGTGTGCAGATGGGAGAAGGACCAGTTCTT
CAAGGCTCAGAAATACCAGGAGGAGATCCAGGATAAGCAGAAGCCGGATG
CGGGGATGAAGGCGGATGAGAAGGAGAGGGAGGTCTATAAGGAGGATGCG
AAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGGCCGACTTGGAAGGCTTT
GGGGTTGGGGCATTATGAGAGGCCGTTGGTTAAGTCGTGATTTTCTCTTT
CTCGCTGATATGCTGGTTTAGAAATTGTTTGTTTGGTATATCATTTGTTG
GCTGGGTTTAGACAGTTTGTGATTGATGCTGTCGTCGTGTATTATATTAT
ATTACCTACTTTGTGTTCAATACTATCATTGTG
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Coding sequence (CDS) from alignment at ACJE01000020.1:679972..681204-

>ASPNIDRAFT_211915-T1 ID=ASPNIDRAFT_211915-T1|Name=ASPNIDRAFT_211915-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1773bp|location=Sequence derived from alignment at ACJE01000020.1:679972..681204- (Aspergillus niger ATCC 1015)
ATGGGAGAAGGACCAGTTCTTCAAGGCTCAGAAATACCAGGAGGAGATCC
AGGATAAGCAGAAGCCGGATGCGGGGATGAAGGCGGATGAGAAGGAGAGG
GAGGTCTATAAGGAGGATGCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTG
GAGGCCGACTTGGAAGGCTTTGGGGTTGGGGCATTATGAGAGGCCGTTGG
TTAAGTCGTGATCCCGACTTCACAATCGCCCTAATCCGCACGCCCTTCCT
TCCCCCCCGCTACGCCACCTTCTACGTGCCGCTCAACTTCAACAAACTGG
ATATGCGCGATTACCTGCAGCGTCTGTACGGCGTGGGCGTCGTCAGCGTG
CGCTCATTCGTCGAACAGCAGAAACTGACGAGGTTGAAGTCCCTGGGTCG
CTATGGATATGGAAAGATCCGTCGCCCGCAGTCTAAGAAGAAGATGACGG
TCGAGATGAAGGAGGCGTTTGTTTGGCCCGAGGCGCCGACGGATATGGCT
CCATGGTCCGACGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTC
GGCCCCGCGGCGCCTCTCTCCCAACGGAAGCAGATCTTCCTATGGGAGAA
GGACCAGTTCTTCAAGGCTCAGAAATACCAGGAGGAGATCCAGGATAAGC
AGAAGCCGGATGCGGGGATGAAGGCGGATGAGAAGGAGAGGGAGGTCTAT
AAGGAGGATGCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGGCCGAC
TTGGAAGGCTTTGGGGTTGGGGCATTATGAGAGGCCGTTGGTTAAGTCGT
GATCCCGACTTCACAATCGCCCTAATCCGCACGCCCTTCCTTCCCCCCCG
CTACGCCACCTTCTACGTGCCGCTCAACTTCAACAAACTGGATATGCGCG
ATTACCTGCAGCGTCTGTACGGCGTGGGCGTCGTCAGCGTGCGCTCATTC
GTCGAACAGCAGAAACTGACGAGGTTGAAGTCCCTGGGTCGCTATGGATA
TGGAAAGATCCGTCGCCCGCAGTCTAAGAAGAAGATGACGGTCGAGATGA
AGGAGGCGTTTGTTTGGCCCGAGGCGCCGACGGATATGGCTCCATGGTCC
GACGATTCTCCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCG
GCGCCTCTCTCCCAACGGAAGCAGATCTTCCTATGGGAGAAGGACCAGTT
CTTCAAGGCTCAGAAATACCAGGAGGAGATCCAGGATAAGCAGAAGCCGG
ATGCGGGGATGAAGGCGGATGAGAAGGAGAGGGAGGTCTATAAGGAGGAT
GCGAAGAAGTTGTTGGAGGGTGCTAAGCCGTGGAGGCCGACTTGGAAGGC
TTTGGGGTTGGGGCATTATGAGAGGCCGTTGGTTAAGTCGTGATCCCGAC
TTCACAATCGCCCTAATCCGCACGCCCTTCCTTCCCCCCCGCTACGCCAC
CTTCTACGTGCCGCTCAACTTCAACAAACTGGATATGCGCGATTACCTGC
AGCGTCTGTACGGCGTGGGCGTCGTCAGCGTGCGCTCATTCGTCGAACAG
CAGAAACTGACGAGGTTGAAGTCCCTGGGTCGCTATGGATATGGAAAGAT
CCGTCGCCCGCAGTCTAAGAAGAAGATGACGGTCGAGATGAAGGAGGCGT
TTGTTTGGCCCGAGGCGCCGACGGATATGGCTCCATGGTCCGACGATTCT
CCAAGTTCCCCAAAAAGCCCGCCGACTGGGTCGGCCCCGCGGCGCCTCTC
TCCCAACGGAAGCAGATCTTCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211915ASPNIDRAFT_211915Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211915-T1ASPNIDRAFT_211915-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211915-T1.cdsASPNIDRAFT_211915-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211915-T1.utr3p1ASPNIDRAFT_211915-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211915-T1.exon3ASPNIDRAFT_211915-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_211915-T1.exon2ASPNIDRAFT_211915-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_211915-T1.exon1ASPNIDRAFT_211915-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211915-T1.utr5p1ASPNIDRAFT_211915-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264HX6
DBxrefInterPro:IPR012678
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR013025
DBxrefPFAM:PF00276
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:679972..681204 -
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