You are here

Home

ASPNIDRAFT_212581-T1, ASPNIDRAFT_212581-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_212581-T1
Unique NameASPNIDRAFT_212581-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:929717..931045+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_212581-T1 ID=ASPNIDRAFT_212581-T1|Name=ASPNIDRAFT_212581-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1329bp|location=Sequence derived from alignment at ACJE01000001.1:929717..931045+ (Aspergillus niger ATCC 1015)
CTTTTCTTCAATTTCACCCTCTCCCCTCTCTTCTCACATCCTCTTCACAC
AATGGCCTCCCGTGGACTTCCCCGTGCCCTCCGTCTGGCCCGCGTCGCGG
CCCCCCGGTCCGTCGTGACTGCCGCCCTCCCCCGTCCTTCCCTGGCCAAG
GCTGCCTCCGCCGCTCTCCCCCGTGTGACCGCCACCCCCGTCGTCCCCTC
CCGCGGTGTTAAGACCATCACCTTCGCTGATGACAAGGAGACCGTCTACG
AGCGTGAGGACTGGCCCCGTGAGAAGCTCCAGGAGTACTTCAAGAACGAC
ACCCTTGCCCTGATCGGCTACGGCTCCCAGGGTCACGGTCAGGGTCTCAA
CCTCCGTGACCAGGGTCTGAACGTCATTGTCGGTGTCCGCAAGGATGGTG
CTTCCTGGAAGGAGGCCATCCAGGACGGCTGGGTTCCCGGCAAGAACCTG
TTCGATGTCACCGAGGCCGTCAAGAAGGGTACCATCATCATGAACCTGCT
CTCCGACGCCGCTCAGTCCGAGACCTGGCCCACCCTGAAGCCCCTCATCA
CCAAGGGCAAGACTCTCTACTTCTCCCACGGTTTCTCCCCCGTCTTCAAG
GACCTCACCAAGGTCGATGTTCCCACCGACGTCGACGTCATCCTCGTCGC
CCCCAAGGGTTCTGGCCGTACCGTCCGCACCCTCTTCCGTGAGGGCCGTG
GTATCAACTCCTCCGTCGCCGTCTTCCAGGACGTCACCGGCAACGCCAAG
GAGCGCGCCATTGCCATGGGTGTCGCCGTCGGTTCCGGCTACCTCTACGA
GACTACCTTCGAGAAGGAGGTCTACTCTGACCTCTACGGTGAGCGTGGTT
GCCTGATGGGTGGTATCCACGGTATGTTCCTCGCTCAGTACGAGGTCCTC
CGTGAGCGTGGCCACTCCCCCTCCGAGGCCTTCAACGAGACCGTTGAGGA
GGCCACCCAGTCCCTCTACCCTCTCATCGGTGCCAACGGCATGGACTGGA
TGTACGCCGCTTGCTCCACCACCGCCCGTCGTGGTGCCCTCGACTGGTCC
AACCGCTTCAAGGACAACCTGAAGCCCCTCTTCAACGAGCTCTACGACAG
CGTCCGTGATGGTTCCGAGACCAAGCGCTCGCTCGAGTACAACTCCCAGA
AGGACTACCGCGAGAAGTACGAGAAGGAGATGCAGGACATCCGTGATCTC
GAAATCTGGCGCGCCGGCAAGGCCGTTCGGTACGTTACTACCTATCCCCC
ATAACAACTTATATACCATTAGAACATTTTACTAACGTTTCAATTTTACA
GCTCCCTCCGCCCCGAGAACCAGAAATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:929717..931045+

>ASPNIDRAFT_212581-T1 ID=ASPNIDRAFT_212581-T1|Name=ASPNIDRAFT_212581-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2412bp|location=Sequence derived from alignment at ACJE01000001.1:929717..931045+ (Aspergillus niger ATCC 1015)
ATGGCCTCCCGTGGACTTCCCCGTGCCCTCCGTCTGGCCCGCGTCGCGGC
CCCCCGGTCCGTCGTGACTGCCGCCCTCCCCCGTCCTTCCCTGGCCAAGG
CTGCCTCCGCCGCTCTCCCCCGTGTGACCGCCACCCCCGTCGTCCCCTCC
CGCGGTGTTAAGACCATCACCTTCGCTGATGACAAGGAGACCGTCTACGA
GCGTGAGGACTGGCCCCGTGAGAAGCTCCAGGAGTACTTCAAGAACGACA
CCCTTGCCCTGATCGGCTACGGCTCCCAGGGTCACGGTCAGGGTCTCAAC
CTCCGTGACCAGGGTCTGAACGTCATTGTCGGTGTCCGCAAGGATGGTGC
TTCCTGGAAGGAGGCCATCCAGGACGGCTGGGTTCCCGGCAAGAACCTGT
TCGATGTCACCGAGGCCGTCAAGAAGGGTACCATCATCATGAACCTGCTC
TCCGACGCCGCTCAGTCCGAGACCTGGCCCACCCTGAAGCCCCTCATCAC
CAAGGGCAAGACTCTCTACTTCTCCCACGGTTTCTCCCCCGTCTTCAAGG
ACCTCACCAAGGTCGATGTTCCCACCGACGTCGACGTCATCCTCGTCGCC
CCCAAGGGTTCTGGCCGTACCGTCCGCACCCTCTTCCGTGAGGGCCGTGG
TATCAACTCCTCCGTCGCCGTCTTCCAGGACGTCACCGGCAACGCCAAGG
AGCGCGCCATTGCCATGGGTGTCGCCGTCGGTTCCGGCTACCTCTACGAG
ACTACCTTCGAGAAGGAGGTCTACTCTGACCTCTACGGTGAGCGTGGTTG
CCTGATGGGTGGTATCCACGGTATGTTCCTCGCTCAGTACGAGGTCCTCC
GTGAGCGTGGCCACTCCCCCTCCGAGGCCTTCAACGAGACCGTTGAGGAG
GCCACCCAGTCCCTCTACCCTCTCATCGGTGCCAACGGCATGGACTGGAT
GTACGCCGCTTGCTCCACCACCGCCCGTCGTGGTGCCCTCGACTGGTCCA
ACCGCTTCAAGGACAACCTGAAGCCCCTCTTCAACGAGCTCTACGACAGC
GTCCGTGATGGTTCCGAGACCAAGCGCTCGCTCGAGTACAACTCCCAGAA
GGACTACCGCGAGAAGTACGAGAAGGAGATGCAGGACATCCGTGATCTCG
AAATCTGGCGCGCCGGCAAGGCCGTTCGCTCCCTCCGCCCCGAGAACCAG
AAATAAATGGCCTCCCGTGGACTTCCCCGTGCCCTCCGTCTGGCCCGCGT
CGCGGCCCCCCGGTCCGTCGTGACTGCCGCCCTCCCCCGTCCTTCCCTGG
CCAAGGCTGCCTCCGCCGCTCTCCCCCGTGTGACCGCCACCCCCGTCGTC
CCCTCCCGCGGTGTTAAGACCATCACCTTCGCTGATGACAAGGAGACCGT
CTACGAGCGTGAGGACTGGCCCCGTGAGAAGCTCCAGGAGTACTTCAAGA
ACGACACCCTTGCCCTGATCGGCTACGGCTCCCAGGGTCACGGTCAGGGT
CTCAACCTCCGTGACCAGGGTCTGAACGTCATTGTCGGTGTCCGCAAGGA
TGGTGCTTCCTGGAAGGAGGCCATCCAGGACGGCTGGGTTCCCGGCAAGA
ACCTGTTCGATGTCACCGAGGCCGTCAAGAAGGGTACCATCATCATGAAC
CTGCTCTCCGACGCCGCTCAGTCCGAGACCTGGCCCACCCTGAAGCCCCT
CATCACCAAGGGCAAGACTCTCTACTTCTCCCACGGTTTCTCCCCCGTCT
TCAAGGACCTCACCAAGGTCGATGTTCCCACCGACGTCGACGTCATCCTC
GTCGCCCCCAAGGGTTCTGGCCGTACCGTCCGCACCCTCTTCCGTGAGGG
CCGTGGTATCAACTCCTCCGTCGCCGTCTTCCAGGACGTCACCGGCAACG
CCAAGGAGCGCGCCATTGCCATGGGTGTCGCCGTCGGTTCCGGCTACCTC
TACGAGACTACCTTCGAGAAGGAGGTCTACTCTGACCTCTACGGTGAGCG
TGGTTGCCTGATGGGTGGTATCCACGGTATGTTCCTCGCTCAGTACGAGG
TCCTCCGTGAGCGTGGCCACTCCCCCTCCGAGGCCTTCAACGAGACCGTT
GAGGAGGCCACCCAGTCCCTCTACCCTCTCATCGGTGCCAACGGCATGGA
CTGGATGTACGCCGCTTGCTCCACCACCGCCCGTCGTGGTGCCCTCGACT
GGTCCAACCGCTTCAAGGACAACCTGAAGCCCCTCTTCAACGAGCTCTAC
GACAGCGTCCGTGATGGTTCCGAGACCAAGCGCTCGCTCGAGTACAACTC
CCAGAAGGACTACCGCGAGAAGTACGAGAAGGAGATGCAGGACATCCGTG
ATCTCGAAATCTGGCGCGCCGGCAAGGCCGTTCGCTCCCTCCGCCCCGAG
AACCAGAAATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0004455ketol-acid reductoisomerase activity
Vocabulary: Biological Process
TermDefinition
GO:0009082branched-chain amino acid biosynthetic process
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ILV2_2ASPNIDRAFT_212581Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212581-T1.utr5p1ASPNIDRAFT_212581-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212581-T1.exon1ASPNIDRAFT_212581-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_212581-T1.exon2ASPNIDRAFT_212581-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212581-T1.cdsASPNIDRAFT_212581-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212581-T1ASPNIDRAFT_212581-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262N3C
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR013023
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR013116
DBxrefInterPro:IPR000506
DBxrefInterPro:IPR016207
DBxrefPFAM:PF07991
DBxrefPFAM:PF01450
Product mitochondrial
ProductAcetolactate synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:929717..931045 +
Powered by Drupal