You are here

Home

ASPNIDRAFT_212968-T1, ASPNIDRAFT_212968-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_212968-T1
Unique NameASPNIDRAFT_212968-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:80786..82040+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_212968-T1 ID=ASPNIDRAFT_212968-T1|Name=ASPNIDRAFT_212968-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1255bp|location=Sequence derived from alignment at ACJE01000005.1:80786..82040+ (Aspergillus niger ATCC 1015)
ATGGAGGTATGTTCATCTTTGCTGTCACAATATGCCGACTAATGCGCGGG
GTAGAACCCCTCATTTGTCCTGCGCAACATCAAAGATGTGGTCATTGAAG
ACCGGCCCAAACCCATCCTCAAAGACCCCCATGATGTGATGGTCCATGTA
GCACAAACAGGTATTTGTGGAAGTGATGTAAGTTGTTTCCACTCTTCTCC
GCCCCCCAAAATCGCCCTTATATGTCCAGATTAACACATCGTACAGGTTC
ACTAGTGTGTATCTTCCCTTGTATCCTATCTAAACATGATCTTGACATGC
TCCCAGCTGGCAACGCGGTCGCATCGGCGACTTCGTCCTCACCGGGCCCA
TGGTCCTCGGCCATGAATCTGCCGGCGTAGTTGTCGAAGTCGGCGACAAA
GTCCGACACCTCAAACCCGGCGATCGTGTCGCCATGGAACCAGGCGTACC
CTGTCGTCGCTGCGACTACTGCCGCAGCGGATCATACAACCTCTGTGGCG
ATACGATCTTCGCTGCGACCCCGCCCTGGGACGGCACCCTCGCCAAATAC
TACGTCAACGCCGCCGACTTCTGCTACAAGATACCGGACCACATGACGCT
CGAGGAAGCAGCCATGGTTGAGCCCGTGTCTGTGGCCGTGGCCATCGCCA
AGACAGCCAACCTGCAAGCGCACCAGACTGTGCTGGTTCTGGGATGCGGT
CCGATCGGCGTACTATGCCAGGCCGTGGCTAAGGCTGCCGGAGCCAGGAC
CATCATCGGAGTGGATGTGATTCCGTACCGACTGGAAGTAGCCAAGTCGT
ACGGCATCGATCACACATTCATGCCCTCGCGGGCCGAGCCCGGCACAGAC
CCGATGGTGCATGCGGAGCGGGTAGCGACGCAGTTGAAGGAGGAGCTGGG
TCTGGGAGAAGGCGTAGACATGGTGTTGGAGTGCTCTGGTGCTGAGCCAT
GTGTGCAGATGGGTATCTACGCGGCCCGCCGGGGAGCCACATTTGTGCAG
GCTGGTATGGGCAAGGAGAACATTTTATTCCCCATTACGGCGGTGTGCAC
GCGTGGGTTGACCATCAAGGGATCCATTCGGTATCTGACTGGGTGCTATC
CGGCGGCTATTGATTTGATTGCCAAGGGCAAGATTGATGTGAAGCGGTTG
ATCACGAACAGGTTCCCGTTCGAGAAGGCCGAGGAGGCATTCGAGTTGGT
CAAGGCTGGACGGGAGGATGTGTTCAAGGTTATGATTGCGGGAGTGCAGG
AGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000005.1:80786..82040+

>ASPNIDRAFT_212968-T1 ID=ASPNIDRAFT_212968-T1|Name=ASPNIDRAFT_212968-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2988bp|location=Sequence derived from alignment at ACJE01000005.1:80786..82040+ (Aspergillus niger ATCC 1015)
ATGGTCCATGTAGCACAAACAGGTATTTGTGGAAGTGATGTTCACTACTG
GCAACGCGGTCGCATCGGCGACTTCGTCCTCACCGGGCCCATGGTCCTCG
GCCATGAATCTGCCGGCGTAGTTGTCGAAGTCGGCGACAAAGTCCGACAC
CTCAAACCCGGCGATCGTGTCGCCATGGAACCAGGCGTACCCTGTCGTCG
CTGCGACTACTGCCGCAGCGGATCATACAACCTCTGTGGCGATACGATCT
TCGCTGCGACCCCGCCCTGGGACGGCACCCTCGCCAAATACTACGTCAAC
GCCGCCGACTTCTGCTACAAGATACCGGACCACATGACGCTCGAGGAAGC
AGCCATGGTTGAGCCCGTGTCTGTGGCCGTGGCCATCGCCAAGACAGCCA
ACCTGCAAGCGCACCAGACTGTGCTGGTTCTGGGATGCGGTCCGATCGGC
GTACTATGCCAGGCCGTGGCTAAGGCTGCCGGAGCCAGGACCATCATCGG
AGTGGATGTGATTCCGTACCGACTGGAAGTAGCCAAGTCGTACGGCATCG
ATCACACATTCATGCCCTCGCGGGCCGAGCCCGGCACAGACCCGATGGTG
CATGCGGAGCGGGTAGCGACGCAGTTGAAGGAGGAGCTGGGTCTGGGAGA
AGGCGTAGACATGGTGTTGGAGTGCTCTGGTGCTGAGCCATGTGTGCAGA
TGGGTATCTACGCGGCCCGCCGGGGAGCCACATTTGTGCAGGCTGGTATG
GGCAAGGAGAACATTTTATTCCCCATTACGGCGGTGTGCACGCGTGGGTT
GACCATCAAGGGATCCATTCGGTATCTGACTGGGTGCTATCCGGCGGCTA
TTGATTTGATTGCCAAGGGCAAGATTGATGTGAAGCGGTTGATCACGAAC
AGGTTCCCGTTCGAGAAGGCCGAGGAGGCATTCGAGTTGGTCAAGGCTGG
ACGGGAGGATGTGTTCAAGGTTATGATTGCGGGAGTGCAGGAGTAAATGG
TCCATGTAGCACAAACAGGTATTTGTGGAAGTGATGTTCACTACTGGCAA
CGCGGTCGCATCGGCGACTTCGTCCTCACCGGGCCCATGGTCCTCGGCCA
TGAATCTGCCGGCGTAGTTGTCGAAGTCGGCGACAAAGTCCGACACCTCA
AACCCGGCGATCGTGTCGCCATGGAACCAGGCGTACCCTGTCGTCGCTGC
GACTACTGCCGCAGCGGATCATACAACCTCTGTGGCGATACGATCTTCGC
TGCGACCCCGCCCTGGGACGGCACCCTCGCCAAATACTACGTCAACGCCG
CCGACTTCTGCTACAAGATACCGGACCACATGACGCTCGAGGAAGCAGCC
ATGGTTGAGCCCGTGTCTGTGGCCGTGGCCATCGCCAAGACAGCCAACCT
GCAAGCGCACCAGACTGTGCTGGTTCTGGGATGCGGTCCGATCGGCGTAC
TATGCCAGGCCGTGGCTAAGGCTGCCGGAGCCAGGACCATCATCGGAGTG
GATGTGATTCCGTACCGACTGGAAGTAGCCAAGTCGTACGGCATCGATCA
CACATTCATGCCCTCGCGGGCCGAGCCCGGCACAGACCCGATGGTGCATG
CGGAGCGGGTAGCGACGCAGTTGAAGGAGGAGCTGGGTCTGGGAGAAGGC
GTAGACATGGTGTTGGAGTGCTCTGGTGCTGAGCCATGTGTGCAGATGGG
TATCTACGCGGCCCGCCGGGGAGCCACATTTGTGCAGGCTGGTATGGGCA
AGGAGAACATTTTATTCCCCATTACGGCGGTGTGCACGCGTGGGTTGACC
ATCAAGGGATCCATTCGGTATCTGACTGGGTGCTATCCGGCGGCTATTGA
TTTGATTGCCAAGGGCAAGATTGATGTGAAGCGGTTGATCACGAACAGGT
TCCCGTTCGAGAAGGCCGAGGAGGCATTCGAGTTGGTCAAGGCTGGACGG
GAGGATGTGTTCAAGGTTATGATTGCGGGAGTGCAGGAGTAAATGGTCCA
TGTAGCACAAACAGGTATTTGTGGAAGTGATGTTCACTACTGGCAACGCG
GTCGCATCGGCGACTTCGTCCTCACCGGGCCCATGGTCCTCGGCCATGAA
TCTGCCGGCGTAGTTGTCGAAGTCGGCGACAAAGTCCGACACCTCAAACC
CGGCGATCGTGTCGCCATGGAACCAGGCGTACCCTGTCGTCGCTGCGACT
ACTGCCGCAGCGGATCATACAACCTCTGTGGCGATACGATCTTCGCTGCG
ACCCCGCCCTGGGACGGCACCCTCGCCAAATACTACGTCAACGCCGCCGA
CTTCTGCTACAAGATACCGGACCACATGACGCTCGAGGAAGCAGCCATGG
TTGAGCCCGTGTCTGTGGCCGTGGCCATCGCCAAGACAGCCAACCTGCAA
GCGCACCAGACTGTGCTGGTTCTGGGATGCGGTCCGATCGGCGTACTATG
CCAGGCCGTGGCTAAGGCTGCCGGAGCCAGGACCATCATCGGAGTGGATG
TGATTCCGTACCGACTGGAAGTAGCCAAGTCGTACGGCATCGATCACACA
TTCATGCCCTCGCGGGCCGAGCCCGGCACAGACCCGATGGTGCATGCGGA
GCGGGTAGCGACGCAGTTGAAGGAGGAGCTGGGTCTGGGAGAAGGCGTAG
ACATGGTGTTGGAGTGCTCTGGTGCTGAGCCATGTGTGCAGATGGGTATC
TACGCGGCCCGCCGGGGAGCCACATTTGTGCAGGCTGGTATGGGCAAGGA
GAACATTTTATTCCCCATTACGGCGGTGTGCACGCGTGGGTTGACCATCA
AGGGATCCATTCGGTATCTGACTGGGTGCTATCCGGCGGCTATTGATTTG
ATTGCCAAGGGCAAGATTGATGTGAAGCGGTTGATCACGAACAGGTTCCC
GTTCGAGAAGGCCGAGGAGGCATTCGAGTTGGTCAAGGCTGGACGGGAGG
ATGTGTTCAAGGTTATGATTGCGGGAGTGCAGGAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212968ASPNIDRAFT_212968Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212968-T1.utr5p1ASPNIDRAFT_212968-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212968-T1.exon1ASPNIDRAFT_212968-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_212968-T1.exon2ASPNIDRAFT_212968-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_212968-T1.exon3ASPNIDRAFT_212968-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212968-T1.cdsASPNIDRAFT_212968-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212968-T1ASPNIDRAFT_212968-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR002328
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR013154
DBxrefInterPro:IPR020843
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:80786..82040 +
Powered by Drupal