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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000016.1:965996..967561- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_213047-T1 ID=ASPNIDRAFT_213047-T1|Name=ASPNIDRAFT_213047-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1566bp|location=Sequence derived from alignment at ACJE01000016.1:965996..967561- (Aspergillus niger ATCC 1015)
ATGCAGACTGTTGTTTGGGACACCCATCTCTACAGTATACTGAGTATATC
TGGGAGGAACAGCCGTTCAGCAGGTGTGTAAAGGTGTACAGGGAGGGGGG
AAGTCCGAACAGAAAGAGAAGGAAGGCGGCGGCAAAGAAAAAGTTCCGCC
GCGGAACAAGAGCGGAGAACAGAACATGATTGGTCCGTGCACGCAGCTGG
ATTATCAACCTTCCATGCCACTGAAGAACCACCGTCAGTCGTTCTTTCTA
CCAACCTGTCGCGAGCCTCGCGTACTGTGCTGTCCAGAGTGTCTTTGAGC
TGCAGTGATCCTCAGCATGCCTCCTGCTCGTGATATCATGGCTCACCGGG
GGGATGACGACGGTGAGTCTATTGCTAATGACACTTGAATATTCACTGAC
TGCCAGCAGAGGTGTGCCCTGTCTGCAAATCCTCCCGTTACCTGAACCCA
GACATGCGATTTCTCATCAATCCCGAATGCTACCACAAGATGTGCGAGTC
CTGCGTGGACCGAATCTTCTCCTCAGGCCCTGCGAACTGTCCCGTGGCGG
GCTGTCACAAGACCCTGCGCAAGAACCGATTTCGCAAGCAGACATTCGAG
GATATTAATGTGGAAAGAGAGGTGGACATTCGGCGCAGAGTAATGCAAAT
GTATGCCAATATCAAATTTGCTAGACCCTGGAATAAGCCACTAATCTTCC
TCTAGTCTTAACCGCCGCGAAGAAGAGTTTGATTCGAAACGAGCCTATGA
TGACTTCCTCGAACAACGCGAAGAGATAATAGCGAACCTTGTCCATGGCA
CAGATGTGGCGAAGACAGAAAGCGACCTACAAAGATATGCTGCAGACAAC
ATGCGGTCGATTCGCGCCAATCAAGCCCTCGAAGCGCAAGAGGCCTCATC
CTTCCGAGAACAACAAACACACGAACAAGAACTGGCACGTCTTCGGCGAG
AGGCAGCTAGACTGGAATATGAGAACGAACGGAAGGAGATGCTTGCCGGC
CGGGAAGACGTTCTCAGCCGTCTTGCGGCAGGTCGACCTGGCGACGCAGC
GGCTATCGCCCGCGAAGGTCACAAGGTGCTGCTTAAGAAATCTTCTGCTC
GCCGCAGTGAAGAAGACCGGATTCGACAGAAGCAGGCTGCTTTGCGCAGC
TCAGATGCCAGGAAAGCTGGGCAGGGCGCCCTTACCACGGCGGACAGGGC
GGATGACAGTGGTGATTCTGGCTTGATCAAGGGTCTTAAGAAGATTGTGA
CGCCCGAGCCTGAGAAGCCTTATGATCCTTTTGGTGGCCTTGTTCCCAAC
AAGAGGGACTACTATACTCTGCGCGACTATTACCCGAACAGCTATCTCGA
CCCCATTCGCCAGGACACTCGTATGCAGGCTGGTGGATACGACCTTCAGG
AATACTACTCGCGTACTTTGATGGAGGCCTTTGCGGGTTTGGGTTGCTTC
ATCGATGAGGAGGTGTCTAAGCGAGAGGTTACAAGTACGATGGGTATCTC
TAGACCCGTCGCTACAGAAGGGGCTGCCTTGGCGGCTGTTTCAAGTGCAG
GCGCCCCAGAAGCCAG back to topCoding sequence (CDS) from alignment at ACJE01000016.1:965996..967561- >ASPNIDRAFT_213047-T1 ID=ASPNIDRAFT_213047-T1|Name=ASPNIDRAFT_213047-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2112bp|location=Sequence derived from alignment at ACJE01000016.1:965996..967561- (Aspergillus niger ATCC 1015)
TCTTAACCGCCGCGAAGAAGAGTTTGATTCGAAACGAGCCTATGATGACT
TCCTCGAACAACGCGAAGAGATAATAGCGAACCTTGTCCATGGCACAGAT
GTGGCGAAGACAGAAAGCGACCTACAAAGATATGCTGCAGACAACATGCG
GTCGATTCGCGCCAATCAAGCCCTCGAAGCGCAAGAGGCCTCATCCTTCC
GAGAACAACAAACACACGAACAAGAACTGGCACGTCTTCGGCGAGAGGCA
GCTAGACTGGAATATGAGAACGAACGGAAGGAGATGCTTGCCGGCCGGGA
AGACGTTCTCAGCCGTCTTGCGGCAGGTCGACCTGGCGACGCAGCGGCTA
TCGCCCGCGAAGGTCACAAGGTGCTGCTTAAGAAATCTTCTGCTCGCCGC
AGTGAAGAAGACCGGATTCGACAGAAGCAGGCTGCTTTGCGCAGCTCAGA
TGCCAGGAAAGCTGGGCAGGGCGCCCTTACCACGGCGGACAGGGCGGATG
ACAGTGGTGATTCTGGCTTGATCAAGGGTCTTAAGAAGATTGTGACGCCC
GAGCCTGAGAAGCCTTATGATCCTTTTGGTGGCCTTGTTCCCAACAAGAG
GGACTACTATACTCTGCGCGACTATTACCCGAACAGCTATCTCGACCCCA
TTCGCCAGGACACTCGTATGCAGGCTGGTGGATACGACCTTCAGGAATAC
TACTCGCGTACTTTGATGGAGGCCTTTGCGGGTTTGGGTTGCTTCATCGA
TGAGGAGGTGTCTAAGCGAGAGGTTACAAGTACGATGGGTATCTCTAGAC
CCGTCGCTACAGAAGGGGCTGCCTTGGCGGCTGTTTCAAGTGCAGGCGCC
CCAGAAGCCATGCGATTTCTCATCAATCCCGAATGCTACCACAAGATGTG
CGAGTCCTGCGTGGACCGAATCTTCTCCTCAGGCCCTGCGAACTGTCCCG
TGGCGGGCTGTCACAAGACCCTGCGCAAGAACCGATTTCGCAAGCAGACA
TTCGAGGATATTAATGTGGAAAGAGAGGTGGACATTCGGCGCAGAGTAAT
GCAAATTCTTAACCGCCGCGAAGAAGAGTTTGATTCGAAACGAGCCTATG
ATGACTTCCTCGAACAACGCGAAGAGATAATAGCGAACCTTGTCCATGGC
ACAGATGTGGCGAAGACAGAAAGCGACCTACAAAGATATGCTGCAGACAA
CATGCGGTCGATTCGCGCCAATCAAGCCCTCGAAGCGCAAGAGGCCTCAT
CCTTCCGAGAACAACAAACACACGAACAAGAACTGGCACGTCTTCGGCGA
GAGGCAGCTAGACTGGAATATGAGAACGAACGGAAGGAGATGCTTGCCGG
CCGGGAAGACGTTCTCAGCCGTCTTGCGGCAGGTCGACCTGGCGACGCAG
CGGCTATCGCCCGCGAAGGTCACAAGGTGCTGCTTAAGAAATCTTCTGCT
CGCCGCAGTGAAGAAGACCGGATTCGACAGAAGCAGGCTGCTTTGCGCAG
CTCAGATGCCAGGAAAGCTGGGCAGGGCGCCCTTACCACGGCGGACAGGG
CGGATGACAGTGGTGATTCTGGCTTGATCAAGGGTCTTAAGAAGATTGTG
ACGCCCGAGCCTGAGAAGCCTTATGATCCTTTTGGTGGCCTTGTTCCCAA
CAAGAGGGACTACTATACTCTGCGCGACTATTACCCGAACAGCTATCTCG
ACCCCATTCGCCAGGACACTCGTATGCAGGCTGGTGGATACGACCTTCAG
GAATACTACTCGCGTACTTTGATGGAGGCCTTTGCGGGTTTGGGTTGCTT
CATCGATGAGGAGGTGTCTAAGCGAGAGGTTACAAGTACGATGGGTATCT
CTAGACCCGTCGCTACAGAAGGGGCTGCCTTGGCGGCTGTTTCAAGTGCA
GGCGCCCCAGAAGCCATGCGATTTCTCATCAATCCCGAATGCTACCACAA
GATGTGCGAGTCCTGCGTGGACCGAATCTTCTCCTCAGGCCCTGCGAACT
GTCCCGTGGCGGGCTGTCACAAGACCCTGCGCAAGAACCGATTTCGCAAG
CAGACATTCGAGGATATTAATGTGGAAAGAGAGGTGGACATTCGGCGCAG
AGTAATGCAAAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005675 | transcription factor TFIIH holo complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0061575 | cyclin-dependent protein serine/threonine kinase activator activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0045737 | positive regulation of cyclin-dependent protein serine/threonine kinase activity |
| GO:0006289 | nucleotide-excision repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092649XV |
| DBxref | InterPro:IPR017907 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR004575 |
| DBxref | InterPro:IPR015877 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF17121 |
| DBxref | PFAM:PF06391 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000016.1 | supercontig | ACJE01000016.1:965996..967561 - |
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