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ASPNIDRAFT_213169-T1, ASPNIDRAFT_213169-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_213169-T1
Unique NameASPNIDRAFT_213169-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:598319..599938+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_213169-T1 ID=ASPNIDRAFT_213169-T1|Name=ASPNIDRAFT_213169-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1620bp|location=Sequence derived from alignment at ACJE01000016.1:598319..599938+ (Aspergillus niger ATCC 1015)
ATGCACCACGGGCGAGTACGTCGCAAGAACGGCAGTCTCAGAGCCTCCAA
AGCTGGCCAGCGTCGCAACATGTCCCATTTGATACCCGATAATGCCCCTC
CACCTCAATCCAAAACCGTCACCGTTAGCGACGATAGTCCTGATACCTCC
GACGCCGCCTCGAACACTTCAGCGACCACCGTTATCACCAATACCTCCAG
CGTCCCTGCCACCTCTCCCACTAACGGGGTTGATCCCGTGAAGAAAGCTA
TGGCCCGCAAGGCTTCGTCGCCGATGGCGCCCCCTTTCATGGTGTCCGCG
CCGGGCAAGGTCATCGTCTTCGGTGAACATGCCGTCGTGCACGGCAAGGC
TGCCATGGCCGCCGCAATCTCCCTCCGCTCCTACTTCCTCGTAACCACTC
TGTCGAAATCACAGCGCACCATTACCTTGAACCTCCGGGACATGGATTTC
AACCACACCTGGAACATTGACGATCTGCCCTGGGATTTCTTCAAACAACC
CTCCAAGAAGAAGTACTATTACGACCTAGTAACTAGCCTCGACGAAGAAT
TGTACGACTCTCTGAAACCATGTGTTGAAGATATATCGCCCAAGGCGCCC
GAGGAGATACGGAAGAAACACAAAGGGTCGGCGCTGGCGTTCCTGTACCT
ATTTTGCTCCTTGGGCTCACCCCAGCACCCAGGAGCTATATATACTTTGC
GCTCGACCATCCCCATGGGTGCAGGTCTTGGAAGCAGCGCCAGTGTCTGC
ACTTGTTTCAGTGCTGCATTGTTACTTCAGATCCGTACTCTAGCAGGCCC
ACATGATGATCAGCCCCCGGATGAAGCGGAGTTACAGATCGAGCGTATCA
ACCGGTGGGCTTTTGTCGGAGAATTATGTATACACGGAAACCCAAGTGGT
GTGGACAACACGGTCTCTACTGGCGGCAAGGCCGTAATTTTCAGGAGAGA
GGACTACTCGAAGCCCCCGAAAGTTATACCGCTACCTAATTTCCCTGAAT
TACCGCTCTTGCTTGTTGACACACGACAGAGCCGCTCGACGGCGGTCGAA
GTTGCCAAAGTTGGGAAGCTCAAGAAGGAACACCCACTCGTCACCGAATC
GATCCTTGATGCCATTGATAAGGTGACTGTGTCCGCTCAGAGTGCGATCC
AGGGGGTGGAGGGTGATAGTATCGATAAGGAGACTCTCGAACATATCGGA
ACGCTGGTTCGTGTCAACCACGGTTTCCTAGTTTCCCTGGGGGTATCTCA
TCCGCGACTGGAGCGAATCCGGGAACTGGTCGACTTTGCCAATATTGGTT
GGACAAAGTTGACTGGTGCGGGCGGCGGTGGTTGTGCGATCACACTCCTG
CGCCCAGATGCCAGTGTGGACGCGCTCCGTGAGCTGGAGCGCAAACTCGC
TGCAGAGAATTTCTCCAAGTATGAGACAACCTTGGGTGGAGACGGTATTG
GAGTCCTCTGGCCAGCGGTGCTGCACAACGGCACTGATGAAGAGGGCGGC
GAAGAGATCGACCAGCAGAAGTTTGAAAATGCCGACGGACCCGAAGGCAT
CGAGCGCCTTGTTGGCGTCGGCGTTCAAGAACGTCGGGAAGGCTGGAAAT
TCTGGAAACGAGCTGTCTGA
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Coding sequence (CDS) from alignment at ACJE01000016.1:598319..599938+

>ASPNIDRAFT_213169-T1 ID=ASPNIDRAFT_213169-T1|Name=ASPNIDRAFT_213169-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1620bp|location=Sequence derived from alignment at ACJE01000016.1:598319..599938+ (Aspergillus niger ATCC 1015)
ATGCACCACGGGCGAGTACGTCGCAAGAACGGCAGTCTCAGAGCCTCCAA
AGCTGGCCAGCGTCGCAACATGTCCCATTTGATACCCGATAATGCCCCTC
CACCTCAATCCAAAACCGTCACCGTTAGCGACGATAGTCCTGATACCTCC
GACGCCGCCTCGAACACTTCAGCGACCACCGTTATCACCAATACCTCCAG
CGTCCCTGCCACCTCTCCCACTAACGGGGTTGATCCCGTGAAGAAAGCTA
TGGCCCGCAAGGCTTCGTCGCCGATGGCGCCCCCTTTCATGGTGTCCGCG
CCGGGCAAGGTCATCGTCTTCGGTGAACATGCCGTCGTGCACGGCAAGGC
TGCCATGGCCGCCGCAATCTCCCTCCGCTCCTACTTCCTCGTAACCACTC
TGTCGAAATCACAGCGCACCATTACCTTGAACCTCCGGGACATGGATTTC
AACCACACCTGGAACATTGACGATCTGCCCTGGGATTTCTTCAAACAACC
CTCCAAGAAGAAGTACTATTACGACCTAGTAACTAGCCTCGACGAAGAAT
TGTACGACTCTCTGAAACCATGTGTTGAAGATATATCGCCCAAGGCGCCC
GAGGAGATACGGAAGAAACACAAAGGGTCGGCGCTGGCGTTCCTGTACCT
ATTTTGCTCCTTGGGCTCACCCCAGCACCCAGGAGCTATATATACTTTGC
GCTCGACCATCCCCATGGGTGCAGGTCTTGGAAGCAGCGCCAGTGTCTGC
ACTTGTTTCAGTGCTGCATTGTTACTTCAGATCCGTACTCTAGCAGGCCC
ACATGATGATCAGCCCCCGGATGAAGCGGAGTTACAGATCGAGCGTATCA
ACCGGTGGGCTTTTGTCGGAGAATTATGTATACACGGAAACCCAAGTGGT
GTGGACAACACGGTCTCTACTGGCGGCAAGGCCGTAATTTTCAGGAGAGA
GGACTACTCGAAGCCCCCGAAAGTTATACCGCTACCTAATTTCCCTGAAT
TACCGCTCTTGCTTGTTGACACACGACAGAGCCGCTCGACGGCGGTCGAA
GTTGCCAAAGTTGGGAAGCTCAAGAAGGAACACCCACTCGTCACCGAATC
GATCCTTGATGCCATTGATAAGGTGACTGTGTCCGCTCAGAGTGCGATCC
AGGGGGTGGAGGGTGATAGTATCGATAAGGAGACTCTCGAACATATCGGA
ACGCTGGTTCGTGTCAACCACGGTTTCCTAGTTTCCCTGGGGGTATCTCA
TCCGCGACTGGAGCGAATCCGGGAACTGGTCGACTTTGCCAATATTGGTT
GGACAAAGTTGACTGGTGCGGGCGGCGGTGGTTGTGCGATCACACTCCTG
CGCCCAGATGCCAGTGTGGACGCGCTCCGTGAGCTGGAGCGCAAACTCGC
TGCAGAGAATTTCTCCAAGTATGAGACAACCTTGGGTGGAGACGGTATTG
GAGTCCTCTGGCCAGCGGTGCTGCACAACGGCACTGATGAAGAGGGCGGC
GAAGAGATCGACCAGCAGAAGTTTGAAAATGCCGACGGACCCGAAGGCAT
CGAGCGCCTTGTTGGCGTCGGCGTTCAAGAACGTCGGGAAGGCTGGAAAT
TCTGGAAACGAGCTGTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004496mevalonate kinase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213169ASPNIDRAFT_213169Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213169-T1.exon1ASPNIDRAFT_213169-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213169-T1.cdsASPNIDRAFT_213169-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213169-T1ASPNIDRAFT_213169-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR006203
DBxrefInterPro:IPR014721
DBxrefInterPro:IPR006204
DBxrefInterPro:IPR013750
DBxrefInterPro:IPR036554
DBxrefInterPro:IPR006205
DBxrefPFAM:PF00288
DBxrefPFAM:PF08544
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:598319..599938 +
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