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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000016.1:353320..355176- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_213266-T1 ID=ASPNIDRAFT_213266-T1|Name=ASPNIDRAFT_213266-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1857bp|location=Sequence derived from alignment at ACJE01000016.1:353320..355176- (Aspergillus niger ATCC 1015)
CAGAAATGGCTTCTGATTCCACCCCCGCAAAGCCAGGGGGCACCTTGTCA
CTCTACGCCAATCTGCTAGATCCCTCTGCCGATAACTCTCCCGGAACGAT
CGCTCGCGCCCCGGTCGTCTTCAAGCAGAGTAGTACTACCGAGAATAATG
ACTCTCAGTCCGATGAATCCGCTGCCAAAAAGCAGCAGCTCAGTGCTGGT
AGACTCATACCCTCTTCTGTTAACTGAGCCATGTTATCTATATTTGAACG
ATCTGATTGCTCACTTGTCCGCCCGGTTGCTCTCGTCGGTGGTTTCCAGC
TTCTCTCAGATTTCAGCCTACCAAGAGGCCCCAGCTAGCAGCTCAGAAAC
CGAAACCGAAGCCGACGTTACCAAAGGCTGCTGCTGCACCAGCGGCTCCG
GCAGCAGCCCCTGTCAAGACTACTCTCGCAGATTGGGCAGCCACCGAGGA
TGACGATGTCAATGGATTCTATGCCGGTCCGAAGAGGCAACGAGGTGGGC
GCAAGAAGCGCAAGAAGAATCGCGAGGCGCAGGAGTTCATACAAAACTGG
GACGACATCTATGACCCGTCGCGACCGAACAACTACGAAGAGTACAAGCA
CAGTGACGAACAAATAGCTGAGGTGAGGGAGTGGAAAGACCGTCTTTACG
CACACCGCATGGCCAGATCGCCCAGCAGGGACTCGCAAAGTGACGATGAT
TATGCACGACCCATGAACCGTAAGCTATATATTCTCAAGAGCGAGATGTC
TATTTGCTCAAAAAACGTTCTAGGTAAATTTGCTCCTCCGAGCAGCTTCG
CACCGCCTCCCAATCTCAACGATATGCCGCCCAGGCCACCCATCGAATCA
CCTCCAGAACGAACAAGCGAAACCCCAGGCGATATTTCAATGTCGGATGC
TCCTCCGCCGCCACCCCCGACCGATGAGCCGCCCGCACAAGTTCCGGATG
ACCCTACAGGCGAAGATGCTTACTTACGGCGCCTCCAAATGTCGATGGGC
AACCAGCCTACAGCAGCTCCTGCTGCGCCACCACCACCACCCAGGCCCCT
AGAATCCCTACAACCAGCTTCCGCAACTATATCCCGCGCACCGGTTCGCT
ACACGCTACCTCCTCCACCCGAGGACATACCTGCGTCAGAGGCGGAACTT
GAAGAAGTCTTCGCAAAGGAACAGCCAGTGGAAGATGAACCGGAAGATGA
GGGCCAGCGTTCGCTGCGGCCAGGACAGAAAGGGTTTGCTGAGCGACTCA
TGGCCAAGTATGGCTGGACCAAGGGCTCTGGCCTGGGTGCCACGGGCTCC
GGCATTGTCAAGCCACTGCAAGTCAAAGTTGAGAAACAGAAGAAACGACC
CGACTCTGAAGGTGGAGGCTTTGCGACGCCCGCTGGTCGGGGCAAGATCA
TTGGTGGCGCAAGAAAGAATGAAGAGGAGGGGAAGTTTGGTCCAATGAGT
GAAGTCATTATATTGAAGGGTATGCTTGATGGAATGGACTTGGATGCTGA
GTTGGCTGGGGACGGCGAGGGCGGTGGTCTCATGCAAGAAATTGGCGAAG
AGTGTTCTGAGAAGGTAGGTGGATGTTTACTCACTACATGGCATAAACTA
ATGCGGTACAGTACGGTCGTGTTGAACGTGTCTTCATACCCCGCGACTCG
GCACCTCCAGTGCCAGTTTTTGTCAAGTTTACCAATCAGCTCTCGGCTCT
ACGTGTAAGTGCTGCATCCATGTCCCATGCCCATTTCAAGGATCCGGCTA
AGAACTATGCATAGGCTGTCAACGCTCTTGAGGGTCGGATCTTCAGTGGA
AATGCTATCACTGCCCGGTTCTACGATGTACATACTTTCGAACAGGGGAT
ATACGAT back to topCoding sequence (CDS) from alignment at ACJE01000016.1:353320..355176- >ASPNIDRAFT_213266-T1 ID=ASPNIDRAFT_213266-T1|Name=ASPNIDRAFT_213266-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7920bp|location=Sequence derived from alignment at ACJE01000016.1:353320..355176- (Aspergillus niger ATCC 1015)
GCTGTCAACGCTCTTGAGGGTCGGATCTTCAGTGGAAATGCTATCACTGC
CCGGTTCTACGATGTACATACTTTCGAACAGGGGATATACGATTACGGTC
GTGTTGAACGTGTCTTCATACCCCGCGACTCGGCACCTCCAGTGCCAGTT
TTTGTCAAGTTTACCAATCAGCTCTCGGCTCTACGTGTAAATTTGCTCCT
CCGAGCAGCTTCGCACCGCCTCCCAATCTCAACGATATGCCGCCCAGGCC
ACCCATCGAATCACCTCCAGAACGAACAAGCGAAACCCCAGGCGATATTT
CAATGTCGGATGCTCCTCCGCCGCCACCCCCGACCGATGAGCCGCCCGCA
CAAGTTCCGGATGACCCTACAGGCGAAGATGCTTACTTACGGCGCCTCCA
AATGTCGATGGGCAACCAGCCTACAGCAGCTCCTGCTGCGCCACCACCAC
CACCCAGGCCCCTAGAATCCCTACAACCAGCTTCCGCAACTATATCCCGC
GCACCGGTTCGCTACACGCTACCTCCTCCACCCGAGGACATACCTGCGTC
AGAGGCGGAACTTGAAGAAGTCTTCGCAAAGGAACAGCCAGTGGAAGATG
AACCGGAAGATGAGGGCCAGCGTTCGCTGCGGCCAGGACAGAAAGGGTTT
GCTGAGCGACTCATGGCCAAGTATGGCTGGACCAAGGGCTCTGGCCTGGG
TGCCACGGGCTCCGGCATTGTCAAGCCACTGCAAGTCAAAGTTGAGAAAC
AGAAGAAACGACCCGACTCTGAAGGTGGAGGCTTTGCGACGCCCGCTGGT
CGGGGCAAGATCATTGGTGGCGCAAGAAAGAATGAAGAGGAGGGGAAGTT
TGGTCCAATGAGTGAAGTCATTATATTGAAGGGTATGCTTGATGGAATGG
ACTTGGATGCTGAGTTGGCTGGGGACGGCGAGGGCGGTGGTCTCATGCAA
GAAATTGGCGAAGAGTGTTCTGAGAAGCTTCTCTCAGATTTCAGCCTACC
AAGAGGCCCCAGCTAGCAGCTCAGAAACCGAAACCGAAGCCGACGTTACC
AAAGGCTGCTGCTGCACCAGCGGCTCCGGCAGCAGCCCCTGTCAAGACTA
CTCTCGCAGATTGGGCAGCCACCGAGGATGACGATGTCAATGGATTCTAT
GCCGGTCCGAAGAGGCAACGAGGTGGGCGCAAGAAGCGCAAGAAGAATCG
CGAGGCGCAGGAGTTCATACAAAACTGGGACGACATCTATGACCCGTCGC
GACCGAACAACTACGAAGAGTACAAGCACAGTGACGAACAAATAGCTGAG
GTGAGGGAGTGGAAAGACCGTCTTTACGCACACCGCATGGCCAGATCGCC
CAGCAGGGACTCGCAAAGTGACGATGATTATGCACGACCCATGAACCATG
GCTTCTGATTCCACCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTACGC
CAATCTGCTAGATCCCTCTGCCGATAACTCTCCCGGAACGATCGCTCGCG
CCCCGGTCGTCTTCAAGCAGAGTAGTACTACCGAGAATAATGACTCTCAG
TCCGATGAATCCGCTGCCAAAAAGCAGCAGCTCAGCTGTCAACGCTCTTG
AGGGTCGGATCTTCAGTGGAAATGCTATCACTGCCCGGTTCTACGATGTA
CATACTTTCGAACAGGGGATATACGATTACGGTCGTGTTGAACGTGTCTT
CATACCCCGCGACTCGGCACCTCCAGTGCCAGTTTTTGTCAAGTTTACCA
ATCAGCTCTCGGCTCTACGTGTAAATTTGCTCCTCCGAGCAGCTTCGCAC
CGCCTCCCAATCTCAACGATATGCCGCCCAGGCCACCCATCGAATCACCT
CCAGAACGAACAAGCGAAACCCCAGGCGATATTTCAATGTCGGATGCTCC
TCCGCCGCCACCCCCGACCGATGAGCCGCCCGCACAAGTTCCGGATGACC
CTACAGGCGAAGATGCTTACTTACGGCGCCTCCAAATGTCGATGGGCAAC
CAGCCTACAGCAGCTCCTGCTGCGCCACCACCACCACCCAGGCCCCTAGA
ATCCCTACAACCAGCTTCCGCAACTATATCCCGCGCACCGGTTCGCTACA
CGCTACCTCCTCCACCCGAGGACATACCTGCGTCAGAGGCGGAACTTGAA
GAAGTCTTCGCAAAGGAACAGCCAGTGGAAGATGAACCGGAAGATGAGGG
CCAGCGTTCGCTGCGGCCAGGACAGAAAGGGTTTGCTGAGCGACTCATGG
CCAAGTATGGCTGGACCAAGGGCTCTGGCCTGGGTGCCACGGGCTCCGGC
ATTGTCAAGCCACTGCAAGTCAAAGTTGAGAAACAGAAGAAACGACCCGA
CTCTGAAGGTGGAGGCTTTGCGACGCCCGCTGGTCGGGGCAAGATCATTG
GTGGCGCAAGAAAGAATGAAGAGGAGGGGAAGTTTGGTCCAATGAGTGAA
GTCATTATATTGAAGGGTATGCTTGATGGAATGGACTTGGATGCTGAGTT
GGCTGGGGACGGCGAGGGCGGTGGTCTCATGCAAGAAATTGGCGAAGAGT
GTTCTGAGAAGCTTCTCTCAGATTTCAGCCTACCAAGAGGCCCCAGCTAG
CAGCTCAGAAACCGAAACCGAAGCCGACGTTACCAAAGGCTGCTGCTGCA
CCAGCGGCTCCGGCAGCAGCCCCTGTCAAGACTACTCTCGCAGATTGGGC
AGCCACCGAGGATGACGATGTCAATGGATTCTATGCCGGTCCGAAGAGGC
AACGAGGTGGGCGCAAGAAGCGCAAGAAGAATCGCGAGGCGCAGGAGTTC
ATACAAAACTGGGACGACATCTATGACCCGTCGCGACCGAACAACTACGA
AGAGTACAAGCACAGTGACGAACAAATAGCTGAGGTGAGGGAGTGGAAAG
ACCGTCTTTACGCACACCGCATGGCCAGATCGCCCAGCAGGGACTCGCAA
AGTGACGATGATTATGCACGACCCATGAACCATGGCTTCTGATTCCACCC
CCGCAAAGCCAGGGGGCACCTTGTCACTCTACGCCAATCTGCTAGATCCC
TCTGCCGATAACTCTCCCGGAACGATCGCTCGCGCCCCGGTCGTCTTCAA
GCAGAGTAGTACTACCGAGAATAATGACTCTCAGTCCGATGAATCCGCTG
CCAAAAAGCAGCAGCTCAGCTGTCAACGCTCTTGAGGGTCGGATCTTCAG
TGGAAATGCTATCACTGCCCGGTTCTACGATGTACATACTTTCGAACAGG
GGATATACGATTACGGTCGTGTTGAACGTGTCTTCATACCCCGCGACTCG
GCACCTCCAGTGCCAGTTTTTGTCAAGTTTACCAATCAGCTCTCGGCTCT
ACGTGTAAATTTGCTCCTCCGAGCAGCTTCGCACCGCCTCCCAATCTCAA
CGATATGCCGCCCAGGCCACCCATCGAATCACCTCCAGAACGAACAAGCG
AAACCCCAGGCGATATTTCAATGTCGGATGCTCCTCCGCCGCCACCCCCG
ACCGATGAGCCGCCCGCACAAGTTCCGGATGACCCTACAGGCGAAGATGC
TTACTTACGGCGCCTCCAAATGTCGATGGGCAACCAGCCTACAGCAGCTC
CTGCTGCGCCACCACCACCACCCAGGCCCCTAGAATCCCTACAACCAGCT
TCCGCAACTATATCCCGCGCACCGGTTCGCTACACGCTACCTCCTCCACC
CGAGGACATACCTGCGTCAGAGGCGGAACTTGAAGAAGTCTTCGCAAAGG
AACAGCCAGTGGAAGATGAACCGGAAGATGAGGGCCAGCGTTCGCTGCGG
CCAGGACAGAAAGGGTTTGCTGAGCGACTCATGGCCAAGTATGGCTGGAC
CAAGGGCTCTGGCCTGGGTGCCACGGGCTCCGGCATTGTCAAGCCACTGC
AAGTCAAAGTTGAGAAACAGAAGAAACGACCCGACTCTGAAGGTGGAGGC
TTTGCGACGCCCGCTGGTCGGGGCAAGATCATTGGTGGCGCAAGAAAGAA
TGAAGAGGAGGGGAAGTTTGGTCCAATGAGTGAAGTCATTATATTGAAGG
GTATGCTTGATGGAATGGACTTGGATGCTGAGTTGGCTGGGGACGGCGAG
GGCGGTGGTCTCATGCAAGAAATTGGCGAAGAGTGTTCTGAGAAGCTTCT
CTCAGATTTCAGCCTACCAAGAGGCCCCAGCTAGCAGCTCAGAAACCGAA
ACCGAAGCCGACGTTACCAAAGGCTGCTGCTGCACCAGCGGCTCCGGCAG
CAGCCCCTGTCAAGACTACTCTCGCAGATTGGGCAGCCACCGAGGATGAC
GATGTCAATGGATTCTATGCCGGTCCGAAGAGGCAACGAGGTGGGCGCAA
GAAGCGCAAGAAGAATCGCGAGGCGCAGGAGTTCATACAAAACTGGGACG
ACATCTATGACCCGTCGCGACCGAACAACTACGAAGAGTACAAGCACAGT
GACGAACAAATAGCTGAGGTGAGGGAGTGGAAAGACCGTCTTTACGCACA
CCGCATGGCCAGATCGCCCAGCAGGGACTCGCAAAGTGACGATGATTATG
CACGACCCATGAACCATGGCTTCTGATTCCACCCCCGCAAAGCCAGGGGG
CACCTTGTCACTCTACGCCAATCTGCTAGATCCCTCTGCCGATAACTCTC
CCGGAACGATCGCTCGCGCCCCGGTCGTCTTCAAGCAGAGTAGTACTACC
GAGAATAATGACTCTCAGTCCGATGAATCCGCTGCCAAAAAGCAGCAGCT
CAGCTGTCAACGCTCTTGAGGGTCGGATCTTCAGTGGAAATGCTATCACT
GCCCGGTTCTACGATGTACATACTTTCGAACAGGGGATATACGATTACGG
TCGTGTTGAACGTGTCTTCATACCCCGCGACTCGGCACCTCCAGTGCCAG
TTTTTGTCAAGTTTACCAATCAGCTCTCGGCTCTACGTGTAAATTTGCTC
CTCCGAGCAGCTTCGCACCGCCTCCCAATCTCAACGATATGCCGCCCAGG
CCACCCATCGAATCACCTCCAGAACGAACAAGCGAAACCCCAGGCGATAT
TTCAATGTCGGATGCTCCTCCGCCGCCACCCCCGACCGATGAGCCGCCCG
CACAAGTTCCGGATGACCCTACAGGCGAAGATGCTTACTTACGGCGCCTC
CAAATGTCGATGGGCAACCAGCCTACAGCAGCTCCTGCTGCGCCACCACC
ACCACCCAGGCCCCTAGAATCCCTACAACCAGCTTCCGCAACTATATCCC
GCGCACCGGTTCGCTACACGCTACCTCCTCCACCCGAGGACATACCTGCG
TCAGAGGCGGAACTTGAAGAAGTCTTCGCAAAGGAACAGCCAGTGGAAGA
TGAACCGGAAGATGAGGGCCAGCGTTCGCTGCGGCCAGGACAGAAAGGGT
TTGCTGAGCGACTCATGGCCAAGTATGGCTGGACCAAGGGCTCTGGCCTG
GGTGCCACGGGCTCCGGCATTGTCAAGCCACTGCAAGTCAAAGTTGAGAA
ACAGAAGAAACGACCCGACTCTGAAGGTGGAGGCTTTGCGACGCCCGCTG
GTCGGGGCAAGATCATTGGTGGCGCAAGAAAGAATGAAGAGGAGGGGAAG
TTTGGTCCAATGAGTGAAGTCATTATATTGAAGGGTATGCTTGATGGAAT
GGACTTGGATGCTGAGTTGGCTGGGGACGGCGAGGGCGGTGGTCTCATGC
AAGAAATTGGCGAAGAGTGTTCTGAGAAGCTTCTCTCAGATTTCAGCCTA
CCAAGAGGCCCCAGCTAGCAGCTCAGAAACCGAAACCGAAGCCGACGTTA
CCAAAGGCTGCTGCTGCACCAGCGGCTCCGGCAGCAGCCCCTGTCAAGAC
TACTCTCGCAGATTGGGCAGCCACCGAGGATGACGATGTCAATGGATTCT
ATGCCGGTCCGAAGAGGCAACGAGGTGGGCGCAAGAAGCGCAAGAAGAAT
CGCGAGGCGCAGGAGTTCATACAAAACTGGGACGACATCTATGACCCGTC
GCGACCGAACAACTACGAAGAGTACAAGCACAGTGACGAACAAATAGCTG
AGGTGAGGGAGTGGAAAGACCGTCTTTACGCACACCGCATGGCCAGATCG
CCCAGCAGGGACTCGCAAAGTGACGATGATTATGCACGACCCATGAACCA
TGGCTTCTGATTCCACCCCCGCAAAGCCAGGGGGCACCTTGTCACTCTAC
GCCAATCTGCTAGATCCCTCTGCCGATAACTCTCCCGGAACGATCGCTCG
CGCCCCGGTCGTCTTCAAGCAGAGTAGTACTACCGAGAATAATGACTCTC
AGTCCGATGAATCCGCTGCCAAAAAGCAGCAGCTCAGCTGTCAACGCTCT
TGAGGGTCGGATCTTCAGTGGAAATGCTATCACTGCCCGGTTCTACGATG
TACATACTTTCGAACAGGGGATATACGATTACGGTCGTGTTGAACGTGTC
TTCATACCCCGCGACTCGGCACCTCCAGTGCCAGTTTTTGTCAAGTTTAC
CAATCAGCTCTCGGCTCTACGTGTAAATTTGCTCCTCCGAGCAGCTTCGC
ACCGCCTCCCAATCTCAACGATATGCCGCCCAGGCCACCCATCGAATCAC
CTCCAGAACGAACAAGCGAAACCCCAGGCGATATTTCAATGTCGGATGCT
CCTCCGCCGCCACCCCCGACCGATGAGCCGCCCGCACAAGTTCCGGATGA
CCCTACAGGCGAAGATGCTTACTTACGGCGCCTCCAAATGTCGATGGGCA
ACCAGCCTACAGCAGCTCCTGCTGCGCCACCACCACCACCCAGGCCCCTA
GAATCCCTACAACCAGCTTCCGCAACTATATCCCGCGCACCGGTTCGCTA
CACGCTACCTCCTCCACCCGAGGACATACCTGCGTCAGAGGCGGAACTTG
AAGAAGTCTTCGCAAAGGAACAGCCAGTGGAAGATGAACCGGAAGATGAG
GGCCAGCGTTCGCTGCGGCCAGGACAGAAAGGGTTTGCTGAGCGACTCAT
GGCCAAGTATGGCTGGACCAAGGGCTCTGGCCTGGGTGCCACGGGCTCCG
GCATTGTCAAGCCACTGCAAGTCAAAGTTGAGAAACAGAAGAAACGACCC
GACTCTGAAGGTGGAGGCTTTGCGACGCCCGCTGGTCGGGGCAAGATCAT
TGGTGGCGCAAGAAAGAATGAAGAGGAGGGGAAGTTTGGTCCAATGAGTG
AAGTCATTATATTGAAGGGTATGCTTGATGGAATGGACTTGGATGCTGAG
TTGGCTGGGGACGGCGAGGGCGGTGGTCTCATGCAAGAAATTGGCGAAGA
GTGTTCTGAGAAGCTTCTCTCAGATTTCAGCCTACCAAGAGGCCCCAGCT
AGCAGCTCAGAAACCGAAACCGAAGCCGACGTTACCAAAGGCTGCTGCTG
CACCAGCGGCTCCGGCAGCAGCCCCTGTCAAGACTACTCTCGCAGATTGG
GCAGCCACCGAGGATGACGATGTCAATGGATTCTATGCCGGTCCGAAGAG
GCAACGAGGTGGGCGCAAGAAGCGCAAGAAGAATCGCGAGGCGCAGGAGT
TCATACAAAACTGGGACGACATCTATGACCCGTCGCGACCGAACAACTAC
GAAGAGTACAAGCACAGTGACGAACAAATAGCTGAGGTGAGGGAGTGGAA
AGACCGTCTTTACGCACACCGCATGGCCAGATCGCCCAGCAGGGACTCGC
AAAGTGACGATGATTATGCACGACCCATGAACCATGGCTTCTGATTCCAC
CCCCGCAAAGCCAGGGGGCACCTTGTCACTCTACGCCAATCTGCTAGATC
CCTCTGCCGATAACTCTCCCGGAACGATCGCTCGCGCCCCGGTCGTCTTC
AAGCAGAGTAGTACTACCGAGAATAATGACTCTCAGTCCGATGAATCCGC
TGCCAAAAAGCAGCAGCTCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | InterPro:IPR000467 |
| DBxref | PFAM:PF00076 |
| DBxref | PFAM:PF01585 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000016.1 | supercontig | ACJE01000016.1:353320..355176 - |
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