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ASPNIDRAFT_213277-T1, ASPNIDRAFT_213277-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_213277-T1
Unique NameASPNIDRAFT_213277-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:340229..341555-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_213277-T1 ID=ASPNIDRAFT_213277-T1|Name=ASPNIDRAFT_213277-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1327bp|location=Sequence derived from alignment at ACJE01000016.1:340229..341555- (Aspergillus niger ATCC 1015)
ATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCACCGCATCTCCG
CGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACCTCCGACAAAA
CAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGCGGTCGATGAT
CACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTCCAGGCGACAAGC
CATCATCAAAGCTCACCCGGAGGTATGCACATACTCCCCCGTGGCCTTTT
CTACCAAAGATTCATTTACTGACATGACCTCCTTCGTGCTTCCTTCAGGT
TACCAAGCTCTGCGGACCAGAGCCCCTGACCAAATATGTCGTTCTGGGCG
TCGTCTCCCTTCAGATCCTCTGCGCCTACCTGCTCCGCAACACGTCCATG
TTCGACTGGAGATTTCTCGCGACTGCATACGTGATCGGAGCCACCTCGAA
CCAGAACCTCTTCCTCGCCATCCACGAGATCTCCCATAACCTCGCCTTCC
GGTCTGCTATGGCCAACCGTCTCTTGGCCATCTTCGCCAATATCCCGATC
GGTTTGCCCTATAGCGCTGCATTCCGGGTACGTTGGACTATGACATCCAG
AAGCATATAAAACCAAGTATACAAGAAGCTAACTTTTCCCGCTCCATAGC
CCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGGCCTAGATACC
GACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCCTTCTAGGAAA
GGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTCCGCCCCATGT
TCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAACCTGATCACT
CAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCGGCTCCCTCCA
ACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGCTCTCTCCACC
CCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTCCCGCGTCGAC
CACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGAAGAAGTCCCA
CCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTACTACGGCCCCC
TCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACACCACGACTTC
CCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCATCGCTAGCGA
ATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGGGTGATCTGGA
CATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGTTAAGCGTGCG
CAGGGCGGTCGTCTCGTTGGTGGTGGT
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Coding sequence (CDS) from alignment at ACJE01000016.1:340229..341555-

>ASPNIDRAFT_213277-T1 ID=ASPNIDRAFT_213277-T1|Name=ASPNIDRAFT_213277-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3537bp|location=Sequence derived from alignment at ACJE01000016.1:340229..341555- (Aspergillus niger ATCC 1015)
CCCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGGCCTAGATAC
CGACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCCTTCTAGGAA
AGGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTCCGCCCCATG
TTCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAACCTGATCAC
TCAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCGGCTCCCTCC
AACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGCTCTCTCCAC
CCCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTCCCGCGTCGA
CCACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGAAGAAGTCCC
ACCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTACTACGGCCCC
CTCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACACCACGACTT
CCCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCATCGCTAGCG
AATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGGGTGATCTGG
ACATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGTTAAGCGTGC
GCAGGGCGGTCGTCTCGTTGGTGGTGGTGTTACCAAGCTCTGCGGACCAG
AGCCCCTGACCAAATATGTCGTTCTGGGCGTCGTCTCCCTTCAGATCCTC
TGCGCCTACCTGCTCCGCAACACGTCCATGTTCGACTGGAGATTTCTCGC
GACTGCATACGTGATCGGAGCCACCTCGAACCAGAACCTCTTCCTCGCCA
TCCACGAGATCTCCCATAACCTCGCCTTCCGGTCTGCTATGGCCAACCGT
CTCTTGGCCATCTTCGCCAATATCCCGATCGGTTTGCCCTATAGCGCTGC
ATTCCGGATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGCTTCACCGC
ATCTCCGCGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAACCACCTCC
GACAAAACAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCCTCCGCGGT
CGATGATCACTTCTTTTGGACATACACAGAGGAGCCGCATCGCTCCAGGC
GACAAGCCATCATCAAAGCTCACCCGGAGCCCTACCATCTCACCCACCAC
AAGTCCCTCGGTGTCGCAGGCCTAGATACCGACCTTCCCACCGCCGTCGA
AGCCTTCCTCCTCGACTCCCTTCTAGGAAAGGCATTCTTCTGCACCTTCC
AGATCTTCTTCTACGCCGTCCGCCCCATGTTCATCTACAGCCCCCCCTTC
ACCTCCATTCACGTCCTGAACCTGATCACTCAGCTCACCTTCGACTACGC
TTTGACCAAGTTCTGCGGCGGCTCCCTCCAACCTCTTCTATACCTCCTTC
TGAGCTCCTTCCTAGCCGGCTCTCTCCACCCCTGTGCCGGCCACTTCATC
GCAGAGCACTACTTCTTCTCCCGCGTCGACCACGGTACCGAGTCTATCCA
AGAGCAGAAGAACAACCAGAAGAAGTCCCACCCTCTCGACTCCCTTCCCC
CACCGGAAACCTACTCCTACTACGGCCCCCTCAACTTCTTCACCTACAAC
GTGGGCCTGCATAACGAACACCACGACTTCCCCGCTATCCCCTGGACAAG
ACTGCACGAGCTCCACCGCATCGCTAGCGAATTCTACGAGCCCCTCCCCT
GCCACCACAGCTGGGTGTGGGTGATCTGGACATTCATCCTGGACAAGAAC
GTCGGCATGTGGTGTCGGGTTAAGCGTGCGCAGGGCGGTCGTCTCGTTGG
TGGTGGTGTTACCAAGCTCTGCGGACCAGAGCCCCTGACCAAATATGTCG
TTCTGGGCGTCGTCTCCCTTCAGATCCTCTGCGCCTACCTGCTCCGCAAC
ACGTCCATGTTCGACTGGAGATTTCTCGCGACTGCATACGTGATCGGAGC
CACCTCGAACCAGAACCTCTTCCTCGCCATCCACGAGATCTCCCATAACC
TCGCCTTCCGGTCTGCTATGGCCAACCGTCTCTTGGCCATCTTCGCCAAT
ATCCCGATCGGTTTGCCCTATAGCGCTGCATTCCGGATGTCTTCGTCCGT
CGTCGAAGCCACCGCGGATGCTTCACCGCATCTCCGCGTGTCCGCATCCA
AGAAGAGCCAGGCTCCGCAAACCACCTCCGACAAAACAGAGCCTTCTACC
AGAATCGATCCTCCAGAAGCCTCCGCGGTCGATGATCACTTCTTTTGGAC
ATACACAGAGGAGCCGCATCGCTCCAGGCGACAAGCCATCATCAAAGCTC
ACCCGGAGCCCTACCATCTCACCCACCACAAGTCCCTCGGTGTCGCAGGC
CTAGATACCGACCTTCCCACCGCCGTCGAAGCCTTCCTCCTCGACTCCCT
TCTAGGAAAGGCATTCTTCTGCACCTTCCAGATCTTCTTCTACGCCGTCC
GCCCCATGTTCATCTACAGCCCCCCCTTCACCTCCATTCACGTCCTGAAC
CTGATCACTCAGCTCACCTTCGACTACGCTTTGACCAAGTTCTGCGGCGG
CTCCCTCCAACCTCTTCTATACCTCCTTCTGAGCTCCTTCCTAGCCGGCT
CTCTCCACCCCTGTGCCGGCCACTTCATCGCAGAGCACTACTTCTTCTCC
CGCGTCGACCACGGTACCGAGTCTATCCAAGAGCAGAAGAACAACCAGAA
GAAGTCCCACCCTCTCGACTCCCTTCCCCCACCGGAAACCTACTCCTACT
ACGGCCCCCTCAACTTCTTCACCTACAACGTGGGCCTGCATAACGAACAC
CACGACTTCCCCGCTATCCCCTGGACAAGACTGCACGAGCTCCACCGCAT
CGCTAGCGAATTCTACGAGCCCCTCCCCTGCCACCACAGCTGGGTGTGGG
TGATCTGGACATTCATCCTGGACAAGAACGTCGGCATGTGGTGTCGGGTT
AAGCGTGCGCAGGGCGGTCGTCTCGTTGGTGGTGGTGTTACCAAGCTCTG
CGGACCAGAGCCCCTGACCAAATATGTCGTTCTGGGCGTCGTCTCCCTTC
AGATCCTCTGCGCCTACCTGCTCCGCAACACGTCCATGTTCGACTGGAGA
TTTCTCGCGACTGCATACGTGATCGGAGCCACCTCGAACCAGAACCTCTT
CCTCGCCATCCACGAGATCTCCCATAACCTCGCCTTCCGGTCTGCTATGG
CCAACCGTCTCTTGGCCATCTTCGCCAATATCCCGATCGGTTTGCCCTAT
AGCGCTGCATTCCGGATGTCTTCGTCCGTCGTCGAAGCCACCGCGGATGC
TTCACCGCATCTCCGCGTGTCCGCATCCAAGAAGAGCCAGGCTCCGCAAA
CCACCTCCGACAAAACAGAGCCTTCTACCAGAATCGATCCTCCAGAAGCC
TCCGCGGTCGATGATCACTTCTTTTGGACATACACAGAGGAGCCGCATCG
CTCCAGGCGACAAGCCATCATCAAAGCTCACCCGGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0042284sphingolipid delta-4 desaturase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0030148sphingolipid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213277ASPNIDRAFT_213277Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213277-T1ASPNIDRAFT_213277-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213277-T1.cdsASPNIDRAFT_213277-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213277-T1.exon3ASPNIDRAFT_213277-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_213277-T1.exon2ASPNIDRAFT_213277-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_213277-T1.exon1ASPNIDRAFT_213277-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR005804
DBxrefInterPro:IPR011388
DBxrefInterPro:IPR013866
DBxrefPFAM:PF08557
DBxrefPFAM:PF00487
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:340229..341555 -
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