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ASPNIDRAFT_214126-T1, ASPNIDRAFT_214126-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_214126-T1
Unique NameASPNIDRAFT_214126-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:879458..880524+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_214126-T1 ID=ASPNIDRAFT_214126-T1|Name=ASPNIDRAFT_214126-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1067bp|location=Sequence derived from alignment at ACJE01000012.1:879458..880524+ (Aspergillus niger ATCC 1015)
CTGCGACAATCAACACGACAGCGCCGGACGATAGCCATGGCTCCCAAGGT
GGAAAACAAGCAAGGTAGGTACAATTTATGCGATTCATCCGTCTTCTTGA
AATTTGCAGATTTGTTCTTGTCGAAAACCCGGTTTTGTGATCCTCGAATG
GCATCTACATGTGGCGGTACTTCGGGGGATAAGGCCCTCTCAGCACGAAC
GAAAAAAAGGCATTCCCGATGAACGATTCGAGCCCTGTGTTTCCCCCGTT
ATTGTCAACTTGCATGGATTTTATTTCGAGCGAGCGATGGGCTATATTTT
ATTTTGAAGTGACGGACGGGCTGACATTCTGGATCTATAGGCAAGACCAA
GCCCAGCGACAAGGCTGGTGCTGCCGCCAAGGCAGTCATTAAGGGTGCTG
GCGTACGTTCTCACAAGGCTTCAAATCCGCCCATGCTCTGTTCGGTGCTA
AATGTCATATAATTTTTCCAGGCGCACAAGGCTCGTAAGGTCCGCACCTC
TACGACCTTCCACCGCCCCAAGACCCTTCAGCTTTCCCGGTCGCCCAAGT
ACCCCCGCAAGTCGATCCCCCATGTCCCTCGCCTCGATGCGCACAAGGTC
ATCCTCTACCCTCTCAACACCGAGAGCGCCATGAAGAAGATCGAGGAGAA
CAACACCCTGGTCTTCATCGTCGACGTCAAGTCCAACAAGCGCCAGATCA
AGCTCGCCCTCAAGAAGCTGTATGACGTTGACACCGTCAAGGTCAACACT
CTCGTCAGGTACGACGACCTATCCCATAATCATTGATGTACTACAGAAGT
CGGAATATCTAACCTTCCTTTAGGCCCGATGGACTGAAGAAGGCCTTCGC
CCGTCTAACCCCTGACGTTGATGCTCTGGACATCGCTGCCACCAAGCTTG
CCATCGTCTAGATACATTTCATTTAGGGTTTGGGTGAATTTTTATTTTGC
GCGGTGGTCCATAAATATCAGTCATAAAGTTAGCTGCCAATGCTTGAATG
AGGGCTGAATGATCGTTTCCAAAAAAGAAAGAAGAGGGAATTACTCAAAT
GCATGAATACCACGAAT
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Coding sequence (CDS) from alignment at ACJE01000012.1:879458..880524+

>ASPNIDRAFT_214126-T1 ID=ASPNIDRAFT_214126-T1|Name=ASPNIDRAFT_214126-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1860bp|location=Sequence derived from alignment at ACJE01000012.1:879458..880524+ (Aspergillus niger ATCC 1015)
ATGGCTCCCAAGGTGGAAAACAAGCAAGGCAAGACCAAGCCCAGCGACAA
GGCTGGTGCTGCCGCCAAGGCAGTCATTAAGGGTGCTGGCGCGCACAAGG
CTCGTAAGGTCCGCACCTCTACGACCTTCCACCGCCCCAAGACCCTTCAG
CTTTCCCGGTCGCCCAAGTACCCCCGCAAGTCGATCCCCCATGTCCCTCG
CCTCGATGCGCACAAGGTCATCCTCTACCCTCTCAACACCGAGAGCGCCA
TGAAGAAGATCGAGGAGAACAACACCCTGGTCTTCATCGTCGACGTCAAG
TCCAACAAGCGCCAGATCAAGCTCGCCCTCAAGAAGCTGTATGACGTTGA
CACCGTCAAGGTCAACACTCTCGTCAGGCCCGATGGACTGAAGAAGGCCT
TCGCCCGTCTAACCCCTGACGTTGATGCTCTGGACATCGCTGCCACCAAG
CTTGCCATCGTCTAGATGGCTCCCAAGGTGGAAAACAAGCAAGGCAAGAC
CAAGCCCAGCGACAAGGCTGGTGCTGCCGCCAAGGCAGTCATTAAGGGTG
CTGGCGCGCACAAGGCTCGTAAGGTCCGCACCTCTACGACCTTCCACCGC
CCCAAGACCCTTCAGCTTTCCCGGTCGCCCAAGTACCCCCGCAAGTCGAT
CCCCCATGTCCCTCGCCTCGATGCGCACAAGGTCATCCTCTACCCTCTCA
ACACCGAGAGCGCCATGAAGAAGATCGAGGAGAACAACACCCTGGTCTTC
ATCGTCGACGTCAAGTCCAACAAGCGCCAGATCAAGCTCGCCCTCAAGAA
GCTGTATGACGTTGACACCGTCAAGGTCAACACTCTCGTCAGGCCCGATG
GACTGAAGAAGGCCTTCGCCCGTCTAACCCCTGACGTTGATGCTCTGGAC
ATCGCTGCCACCAAGCTTGCCATCGTCTAGATGGCTCCCAAGGTGGAAAA
CAAGCAAGGCAAGACCAAGCCCAGCGACAAGGCTGGTGCTGCCGCCAAGG
CAGTCATTAAGGGTGCTGGCGCGCACAAGGCTCGTAAGGTCCGCACCTCT
ACGACCTTCCACCGCCCCAAGACCCTTCAGCTTTCCCGGTCGCCCAAGTA
CCCCCGCAAGTCGATCCCCCATGTCCCTCGCCTCGATGCGCACAAGGTCA
TCCTCTACCCTCTCAACACCGAGAGCGCCATGAAGAAGATCGAGGAGAAC
AACACCCTGGTCTTCATCGTCGACGTCAAGTCCAACAAGCGCCAGATCAA
GCTCGCCCTCAAGAAGCTGTATGACGTTGACACCGTCAAGGTCAACACTC
TCGTCAGGCCCGATGGACTGAAGAAGGCCTTCGCCCGTCTAACCCCTGAC
GTTGATGCTCTGGACATCGCTGCCACCAAGCTTGCCATCGTCTAGATGGC
TCCCAAGGTGGAAAACAAGCAAGGCAAGACCAAGCCCAGCGACAAGGCTG
GTGCTGCCGCCAAGGCAGTCATTAAGGGTGCTGGCGCGCACAAGGCTCGT
AAGGTCCGCACCTCTACGACCTTCCACCGCCCCAAGACCCTTCAGCTTTC
CCGGTCGCCCAAGTACCCCCGCAAGTCGATCCCCCATGTCCCTCGCCTCG
ATGCGCACAAGGTCATCCTCTACCCTCTCAACACCGAGAGCGCCATGAAG
AAGATCGAGGAGAACAACACCCTGGTCTTCATCGTCGACGTCAAGTCCAA
CAAGCGCCAGATCAAGCTCGCCCTCAAGAAGCTGTATGACGTTGACACCG
TCAAGGTCAACACTCTCGTCAGGCCCGATGGACTGAAGAAGGCCTTCGCC
CGTCTAACCCCTGACGTTGATGCTCTGGACATCGCTGCCACCAAGCTTGC
CATCGTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL23AASPNIDRAFT_214126Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214126-T1ASPNIDRAFT_214126-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214126-T1.utr5p1ASPNIDRAFT_214126-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214126-T1.exon1ASPNIDRAFT_214126-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_214126-T1.exon2ASPNIDRAFT_214126-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_214126-T1.exon3ASPNIDRAFT_214126-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_214126-T1.exon4ASPNIDRAFT_214126-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214126-T1.cdsASPNIDRAFT_214126-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214126-T1.utr3p1ASPNIDRAFT_214126-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092657YR
DBxrefInterPro:IPR012678
DBxrefInterPro:IPR013025
DBxrefInterPro:IPR005633
DBxrefInterPro:IPR012677
DBxrefPFAM:PF03939
DBxrefPFAM:PF00276
Product60S ribosomal protein L23A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:879458..880524 +
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