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ASPNIDRAFT_214483-T1, ASPNIDRAFT_214483-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_214483-T1
Unique NameASPNIDRAFT_214483-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000014.1:486991..488698+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_214483-T1 ID=ASPNIDRAFT_214483-T1|Name=ASPNIDRAFT_214483-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1708bp|location=Sequence derived from alignment at ACJE01000014.1:486991..488698+ (Aspergillus niger ATCC 1015)
GGAAGCTTGACAGTTATAAGCCTGTCAGCTTTTTCTTCTTACAGTTTTCT
TCATTCTTTGAAAGGGACCGGATCCCTAAACTTCTGACATTATGGGAAAG
TCGGACAACTCTCTTCCTCTCTTGGGGGCAAAGACATCCATCGATCCTAC
CCTAGCTGCCTTGTTTGAGACAAGTGTGCGTACCACACATCTTATGCTTC
GCGAGTATATCTTGGACTAACATGGCCCCATTGGGCATATTTAGGCTGGC
CCAGTAAAGGCTCCATCCGTCACAATCGCCGCTCCCGCTCCCCAATCAAG
CAAGCGCAATGGCGACAATGACGAAGATGAGGATAACGAAGATGTGATCT
CCGAACCGGAAGACGAATCTCTGCCTGAGGACGAGGAGATGCAGGAAGCC
CCGGAAGCATCGAGCGATGCTGAAGTAGCCGCCGAGGCGCCCAGCCGCAA
ACGCAAGAGGACCACTGCAGAAGATGTCGAAGACACATACATGCGTCGCA
TTGCAAAGGAGCAAAAGAAGGAGGATGAAAAGAGACGGGAAGAGAAGGCG
AAGCGACAGAAGACGGTAGACGGTGAGCAGGAAGAGGATGCCGAGCAATC
AGAGGAAGAAGACGATGATGAGGAGAGCTCTGAAGAGGATGAGGAAAAGA
AGGCCGTCCCGAAGCACGAGAGCCAGACTGGTGATGCCGAGTCGAAGGAA
CTGGACAAATCCAACCGGACTGTTTTCTTGGGCAATGTCTCTAGTGAGGC
GATCAAGTCCAAGTCCGCTAAAAAGACCCTCCTCAAACACCTGGCATCTT
TCCTCTCTACGCTTCCGGAGTCTACTGGACCTCACAAGGTGGAATCTATT
CGCTTCCGCTCCACAGCATTTGCCAGTGGTGGCGGAGTCCCCAAGCGAGC
CTCATTTGCCAAGCAAGAAGTTCTGGATGATACGACGCCGTGCACCAACG
CATATGCCGTATACAGCACTGTGCAAGCTGCGCGCAAGGCGCCCGCTGCG
CTTAACGGTACCGTGGTTCTGGACCGGCATTTGCGTGTTGACAGTGTCGC
GCATCCTTCCCCAATCGACCATAAACGGTGTGTCTTCGTTGGTAACCTGG
ACTTTGTCGACAACGAGGTCAAGCCCGACGATGAGCAGAAGAAGAAGAAG
CGAGCCCCCGCAGATGTTGAAGAAGGTCTTTGGCGGACCTTCAACGCTCA
CACCGGTCGTTCGAATAAGGAAAAACCCAAGAATGGCAATGTTGAATCAG
TCCGCGTGGTTCGCGACAGCCTTACTCGGGTCGGCAAAGGATTTGCCTAC
GTTCAATTCTATGATCAAAACTGTGTAGAGGAGGCTCTTGTACTCAATGG
AAAGCATTATCCGCCTATGCTCCCCCGCAAACTCCGCGTGTCGCGTGCCA
AGAAGGTTTTGAAGAAGCGTGCAGACGGTGGCAGCCAGAAGAAGACGCTT
GGTGTGGCAGATAAGACCCTGCAGGGTCGCGCTGGAAGACTATTTGGTCG
GGCCGGTGCGGCCAAGGTGAAGGCCGATGCGCAGAAGTCCATCTCGCAGA
ACTCGACGGTGTTCGAAGGCCATCGGGCCACCGAAGGTTCGCACATTCGG
GTCAAGACGAAGAGCCGTGGCTCCAAGGGCAAGCCGAACAACCGGAGCAG
CAAGCGTGCTGCGGCCTACAAAGCCGCTGGTGGGTGGAAGAAGGGGAAGA
CGGATTAA
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Coding sequence (CDS) from alignment at ACJE01000014.1:486991..488698+

>ASPNIDRAFT_214483-T1 ID=ASPNIDRAFT_214483-T1|Name=ASPNIDRAFT_214483-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3096bp|location=Sequence derived from alignment at ACJE01000014.1:486991..488698+ (Aspergillus niger ATCC 1015)
ATGGGAAAGTCGGACAACTCTCTTCCTCTCTTGGGGGCAAAGACATCCAT
CGATCCTACCCTAGCTGCCTTGTTTGAGACAAGTGCTGGCCCAGTAAAGG
CTCCATCCGTCACAATCGCCGCTCCCGCTCCCCAATCAAGCAAGCGCAAT
GGCGACAATGACGAAGATGAGGATAACGAAGATGTGATCTCCGAACCGGA
AGACGAATCTCTGCCTGAGGACGAGGAGATGCAGGAAGCCCCGGAAGCAT
CGAGCGATGCTGAAGTAGCCGCCGAGGCGCCCAGCCGCAAACGCAAGAGG
ACCACTGCAGAAGATGTCGAAGACACATACATGCGTCGCATTGCAAAGGA
GCAAAAGAAGGAGGATGAAAAGAGACGGGAAGAGAAGGCGAAGCGACAGA
AGACGGTAGACGGTGAGCAGGAAGAGGATGCCGAGCAATCAGAGGAAGAA
GACGATGATGAGGAGAGCTCTGAAGAGGATGAGGAAAAGAAGGCCGTCCC
GAAGCACGAGAGCCAGACTGGTGATGCCGAGTCGAAGGAACTGGACAAAT
CCAACCGGACTGTTTTCTTGGGCAATGTCTCTAGTGAGGCGATCAAGTCC
AAGTCCGCTAAAAAGACCCTCCTCAAACACCTGGCATCTTTCCTCTCTAC
GCTTCCGGAGTCTACTGGACCTCACAAGGTGGAATCTATTCGCTTCCGCT
CCACAGCATTTGCCAGTGGTGGCGGAGTCCCCAAGCGAGCCTCATTTGCC
AAGCAAGAAGTTCTGGATGATACGACGCCGTGCACCAACGCATATGCCGT
ATACAGCACTGTGCAAGCTGCGCGCAAGGCGCCCGCTGCGCTTAACGGTA
CCGTGGTTCTGGACCGGCATTTGCGTGTTGACAGTGTCGCGCATCCTTCC
CCAATCGACCATAAACGGTGTGTCTTCGTTGGTAACCTGGACTTTGTCGA
CAACGAGGTCAAGCCCGACGATGAGCAGAAGAAGAAGAAGCGAGCCCCCG
CAGATGTTGAAGAAGGTCTTTGGCGGACCTTCAACGCTCACACCGGTCGT
TCGAATAAGGAAAAACCCAAGAATGGCAATGTTGAATCAGTCCGCGTGGT
TCGCGACAGCCTTACTCGGGTCGGCAAAGGATTTGCCTACGTTCAATTCT
ATGATCAAAACTGTGTAGAGGAGGCTCTTGTACTCAATGGAAAGCATTAT
CCGCCTATGCTCCCCCGCAAACTCCGCGTGTCGCGTGCCAAGAAGGTTTT
GAAGAAGCGTGCAGACGGTGGCAGCCAGAAGAAGACGCTTGGTGTGGCAG
ATAAGACCCTGCAGGGTCGCGCTGGAAGACTATTTGGTCGGGCCGGTGCG
GCCAAGGTGAAGGCCGATGCGCAGAAGTCCATCTCGCAGAACTCGACGGT
GTTCGAAGGCCATCGGGCCACCGAAGGTTCGCACATTCGGGTCAAGACGA
AGAGCCGTGGCTCCAAGGGCAAGCCGAACAACCGGAGCAGCAAGCGTGCT
GCGGCCTACAAAGCCGCTGGTGGGTGGAAGAAGGGGAAGACGGATTAAAT
GGGAAAGTCGGACAACTCTCTTCCTCTCTTGGGGGCAAAGACATCCATCG
ATCCTACCCTAGCTGCCTTGTTTGAGACAAGTGCTGGCCCAGTAAAGGCT
CCATCCGTCACAATCGCCGCTCCCGCTCCCCAATCAAGCAAGCGCAATGG
CGACAATGACGAAGATGAGGATAACGAAGATGTGATCTCCGAACCGGAAG
ACGAATCTCTGCCTGAGGACGAGGAGATGCAGGAAGCCCCGGAAGCATCG
AGCGATGCTGAAGTAGCCGCCGAGGCGCCCAGCCGCAAACGCAAGAGGAC
CACTGCAGAAGATGTCGAAGACACATACATGCGTCGCATTGCAAAGGAGC
AAAAGAAGGAGGATGAAAAGAGACGGGAAGAGAAGGCGAAGCGACAGAAG
ACGGTAGACGGTGAGCAGGAAGAGGATGCCGAGCAATCAGAGGAAGAAGA
CGATGATGAGGAGAGCTCTGAAGAGGATGAGGAAAAGAAGGCCGTCCCGA
AGCACGAGAGCCAGACTGGTGATGCCGAGTCGAAGGAACTGGACAAATCC
AACCGGACTGTTTTCTTGGGCAATGTCTCTAGTGAGGCGATCAAGTCCAA
GTCCGCTAAAAAGACCCTCCTCAAACACCTGGCATCTTTCCTCTCTACGC
TTCCGGAGTCTACTGGACCTCACAAGGTGGAATCTATTCGCTTCCGCTCC
ACAGCATTTGCCAGTGGTGGCGGAGTCCCCAAGCGAGCCTCATTTGCCAA
GCAAGAAGTTCTGGATGATACGACGCCGTGCACCAACGCATATGCCGTAT
ACAGCACTGTGCAAGCTGCGCGCAAGGCGCCCGCTGCGCTTAACGGTACC
GTGGTTCTGGACCGGCATTTGCGTGTTGACAGTGTCGCGCATCCTTCCCC
AATCGACCATAAACGGTGTGTCTTCGTTGGTAACCTGGACTTTGTCGACA
ACGAGGTCAAGCCCGACGATGAGCAGAAGAAGAAGAAGCGAGCCCCCGCA
GATGTTGAAGAAGGTCTTTGGCGGACCTTCAACGCTCACACCGGTCGTTC
GAATAAGGAAAAACCCAAGAATGGCAATGTTGAATCAGTCCGCGTGGTTC
GCGACAGCCTTACTCGGGTCGGCAAAGGATTTGCCTACGTTCAATTCTAT
GATCAAAACTGTGTAGAGGAGGCTCTTGTACTCAATGGAAAGCATTATCC
GCCTATGCTCCCCCGCAAACTCCGCGTGTCGCGTGCCAAGAAGGTTTTGA
AGAAGCGTGCAGACGGTGGCAGCCAGAAGAAGACGCTTGGTGTGGCAGAT
AAGACCCTGCAGGGTCGCGCTGGAAGACTATTTGGTCGGGCCGGTGCGGC
CAAGGTGAAGGCCGATGCGCAGAAGTCCATCTCGCAGAACTCGACGGTGT
TCGAAGGCCATCGGGCCACCGAAGGTTCGCACATTCGGGTCAAGACGAAG
AGCCGTGGCTCCAAGGGCAAGCCGAACAACCGGAGCAGCAAGCGTGCTGC
GGCCTACAAAGCCGCTGGTGGGTGGAAGAAGGGGAAGACGGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NOP12ASPNIDRAFT_214483Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214483-T1.utr5p1ASPNIDRAFT_214483-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214483-T1.exon1ASPNIDRAFT_214483-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_214483-T1.exon2ASPNIDRAFT_214483-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214483-T1.cdsASPNIDRAFT_214483-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214483-T1ASPNIDRAFT_214483-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264IQ7
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034777
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
ProductNucleolar protein 12
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000014.1supercontigACJE01000014.1:486991..488698 +
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