You are here

Home

ASPNIDRAFT_214881-T1, ASPNIDRAFT_214881-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_214881-T1
Unique NameASPNIDRAFT_214881-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000011.1:96424..97473-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_214881-T1 ID=ASPNIDRAFT_214881-T1|Name=ASPNIDRAFT_214881-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1050bp|location=Sequence derived from alignment at ACJE01000011.1:96424..97473- (Aspergillus niger ATCC 1015)
GTGCTGTCACACTTGTAACCACGATAATGACGGCCTCGACGGAAGATATT
TCGCCCTTTTCGGTGGAAGGGAAGACGGCCATTGTCACGGGCGCTGGCTC
GGGTTAGTCTCCTCTCCTTCCCTTCGCTTGACAGTCTTCTGATGGTGATA
GGGATCAATCTGTCATTTGCATCTCTTCTACTATCCCGGAATTGCAATGT
AGTGGTGGCCGACATCGCATTGCGACCAGAAGCCGAGCAACTCATTGCCA
AGTATGAGGCCGCCGATTCCTCCCCGCGAGCAGTTTTCATTCGCACAGAC
GTCACCTCTTGGGCAGACCTGAATCGCATGTTCGATTTGACCTTGTCCTT
GTTCGAAGAATTCCATATCCTCTGTCCTGGGGCTGGGGTCTACGAGCCCC
CGTGGTCAAATTTCTGGCAGCCACCCGGTTCCGCGATCAGCAAAGACAAG
GACGACAGCGACCGGTACGCTCTACTGGATATCAACGTCACGCATCCGAT
CCGAACGACCCAACTGGCCTTGTCGCACTGGTTGCATCCGACGAGCCCCA
ACGTGACTCCTGTCTCCCCGCAGAATCCCCGCCGCGTTATTCACATCTCC
TCCGTGGCAGCCCAACTGCCGAACGTTGTGTGTCCCATGTATGGCGCTTC
AAAGGCCGCCATTACCGGCTTTGTGCGATGTCTAGCCCCCCTCGAACAAG
CCATTGGCGTCCGCGTCAATGCAGTGGCCCCCGGTCTCATACGTACGCCA
TTGTGGGTTGAAAATCAGGAGAAGTTGATGCTTATCGACCAGGAGAAGGA
TGGATGGGCAACGCCCGAAGAGGTCGCCTCAGCCATGCTACGATGCATGG
AAGAGAAGGAGCTTGAGGGTGGAACAATCCTAGAAGTTGTTCGCAACTCA
ACCCGACGCGTCGAGACGCTCAATGACCCAGGTCCCGCCAGGGCGGCTGG
GGATGCCTCCATTGCCAGCAAGAATCAGCAGGGGGTGGACCAACTCCTCG
AATTCCTGAAGCAGAAGGATATATGGGCCCCACAACAGCGGTCGACGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000011.1:96424..97473-

>ASPNIDRAFT_214881-T1 ID=ASPNIDRAFT_214881-T1|Name=ASPNIDRAFT_214881-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1950bp|location=Sequence derived from alignment at ACJE01000011.1:96424..97473- (Aspergillus niger ATCC 1015)
GGATCAATCTGTCATTTGCATCTCTTCTACTATCCCGGAATTGCAATGTA
GTGGTGGCCGACATCGCATTGCGACCAGAAGCCGAGCAACTCATTGCCAA
GTATGAGGCCGCCGATTCCTCCCCGCGAGCAGTTTTCATTCGCACAGACG
TCACCTCTTGGGCAGACCTGAATCGCATGTTCGATTTGACCTTGTCCTTG
TTCGAAGAATTCCATATCCTCTGTCCTGGGGCTGGGGTCTACGAGCCCCC
GTGGTCAAATTTCTGGCAGCCACCCGGTTCCGCGATCAGCAAAGACAAGG
ACGACAGCGACCGGTACGCTCTACTGGATATCAACGTCACGCATCCGATC
CGAACGACCCAACTGGCCTTGTCGCACTGGTTGCATCCGACGAGCCCCAA
CGTGACTCCTGTCTCCCCGCAGAATCCCCGCCGCGTTATTCACATCTCCT
CCGTGGCAGCCCAACTGCCGAACGTTGTGTGTCCCATGTATGGCGCTTCA
AAGGCCGCCATTACCGGCTTTGTGCGATGTCTAGCCCCCCTCGAACAAGC
CATTGGCGTCCGCGTCAATGCAGTGGCCCCCGGTCTCATACGTACGCCAT
TGTGGGTTGAAAATCAGGAGAAGTTGATGCTTATCGACCAGGAGAAGGAT
GGATGGGCAACGCCCGAAGAGGTCGCCTCAGCCATGCTACGATGCATGGA
AGAGAAGGAGCTTGAGGGTGGAACAATCCTAGAAGTTGTTCGCAACTCAA
CCCGACGCGTCGAGACGCTCAATGACCCAGGTCCCGCCAGGGCGGCTGGG
GATGCCTCCATTGCCAGCAAGAATCAGCAGGGGGTGGACCAACTCCTCGA
ATTCCTGAAGCAGAAGGATATATGGGCCCCACAACAGCGGTCGACGTAGA
TGACGGCCTCGACGGAAGATATTTCGCCCTTTTCGGTGGAAGGGAAGACG
GCCATTGTCACGGGCGCTGGCTCGGGGATCAATCTGTCATTTGCATCTCT
TCTACTATCCCGGAATTGCAATGTAGTGGTGGCCGACATCGCATTGCGAC
CAGAAGCCGAGCAACTCATTGCCAAGTATGAGGCCGCCGATTCCTCCCCG
CGAGCAGTTTTCATTCGCACAGACGTCACCTCTTGGGCAGACCTGAATCG
CATGTTCGATTTGACCTTGTCCTTGTTCGAAGAATTCCATATCCTCTGTC
CTGGGGCTGGGGTCTACGAGCCCCCGTGGTCAAATTTCTGGCAGCCACCC
GGTTCCGCGATCAGCAAAGACAAGGACGACAGCGACCGGTACGCTCTACT
GGATATCAACGTCACGCATCCGATCCGAACGACCCAACTGGCCTTGTCGC
ACTGGTTGCATCCGACGAGCCCCAACGTGACTCCTGTCTCCCCGCAGAAT
CCCCGCCGCGTTATTCACATCTCCTCCGTGGCAGCCCAACTGCCGAACGT
TGTGTGTCCCATGTATGGCGCTTCAAAGGCCGCCATTACCGGCTTTGTGC
GATGTCTAGCCCCCCTCGAACAAGCCATTGGCGTCCGCGTCAATGCAGTG
GCCCCCGGTCTCATACGTACGCCATTGTGGGTTGAAAATCAGGAGAAGTT
GATGCTTATCGACCAGGAGAAGGATGGATGGGCAACGCCCGAAGAGGTCG
CCTCAGCCATGCTACGATGCATGGAAGAGAAGGAGCTTGAGGGTGGAACA
ATCCTAGAAGTTGTTCGCAACTCAACCCGACGCGTCGAGACGCTCAATGA
CCCAGGTCCCGCCAGGGCGGCTGGGGATGCCTCCATTGCCAGCAAGAATC
AGCAGGGGGTGGACCAACTCCTCGAATTCCTGAAGCAGAAGGATATATGG
GCCCCACAACAGCGGTCGACGTAGATGACGGCCTCGACGGAAGATATTTC
GCCCTTTTCGGTGGAAGGGAAGACGGCCATTGTCACGGGCGCTGGCTCGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214881ASPNIDRAFT_214881Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214881-T1ASPNIDRAFT_214881-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214881-T1.cdsASPNIDRAFT_214881-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214881-T1.exon2ASPNIDRAFT_214881-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_214881-T1.exon1ASPNIDRAFT_214881-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_214881-T1.utr5p1ASPNIDRAFT_214881-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000011.1supercontigACJE01000011.1:96424..97473 -
Powered by Drupal