You are here

Home

ASPNIDRAFT_225675-T1, ASPNIDRAFT_225675-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_225675-T1
Unique NameASPNIDRAFT_225675-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:931215..932285+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_225675-T1 ID=ASPNIDRAFT_225675-T1|Name=ASPNIDRAFT_225675-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1071bp|location=Sequence derived from alignment at ACJE01000010.1:931215..932285+ (Aspergillus niger ATCC 1015)
ATGGACGACGCCCATCCAAAGCTCCACCTCTACTCTCTTCCCAACGAAGT
GCGACAACGCGATCTCCAACGGTTGTCAAGATGTCTCGCTAATGCTTGTA
TGGCTCTTCCAGGTTCTCGGTCAGATTCTATCCTCTTTCTCGACGCGCTC
CCTCATCTCTTGGGCGACAGTTTCTCACCGCTTCTACGCCCTCGTCCTAC
GGATCCTACATTATCGCCTACTCATCGGCGCTCCACTGCATGAATACAAA
CTCATCCTAGAATGCTTTCATCCAAACTCAAAGCTAACCGAACCTCATGT
ATTCTGCACATACCTTGACACCGACGGTTTAGATTGGCTCTCCGGGCGGG
GTGGTTCGCTTTATGAGAATCCCGACACGACCCAGCAACTTGGGAAACTG
AGTTCGGTGTATTCTCGGTTCCGTCCTGAAGTCGTGGTAGAAGAAAGATT
TAGCGGAACAAGGCTAGTTCCCCTAAGAGGTATGTATCCCTGTTCCCGGA
CACAGTGGTCACGGCCCCGAAGTCTCTGACTTTGGCAGACGATGAGCAAG
AATCCGATCGGGACAACTTGGTTGTCACGCGCCCTATAATCCTCAAGGAC
TCTGAAGACTTCTCTCAGCTATGTATGGTTGTGAACATTGTGAAGGTCAT
GCCGGGTACGAATCTGCTTCTAAGTGCACACACGGTTGAGGACGGGGTAA
TCAGGGTTTTCCGCGACTGGCTGAGGGACGAAGAGAAGCGCTTCCGGGAT
ATTGTACCTGATGGTACAGGGCCTTCGCAAATGCTATGGGTCGATCAGAG
CAAGGGTGTCGGCATCAAAGTGCGGGTCAAGGCGAAACCGCTTATGAACC
AAAATGTGCCAATTCTCGTCCATCGCGACGACGACGAATTCACGAGCTAT
GAATTGTTAATCGAAGGTATGATGATCCCTTCTCCTATTTTAACTATATA
CACTAACAGATGACTAGAATTACATATACGCGCTGTTCGCTTACTATTGA
CTTTGGAAAAATCGCAGGAGGAACAGCAGAACTATTATAAAGCTGTAGTT
ATAACCCCCACCCTTGGATAG
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:931215..932285+

>ASPNIDRAFT_225675-T1 ID=ASPNIDRAFT_225675-T1|Name=ASPNIDRAFT_225675-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3444bp|location=Sequence derived from alignment at ACJE01000010.1:931215..932285+ (Aspergillus niger ATCC 1015)
ATGGACGACGCCCATCCAAAGCTCCACCTCTACTCTCTTCCCAACGAAGT
TCTCGGTCAGATTCTATCCTCTTTCTCGACGCGCTCCCTCATCTCTTGGG
CGACAGTTTCTCACCGCTTCTACGCCCTCGTCCTACGGATCCTACATTAT
CGCCTACTCATCGGCGCTCCACTGCATGAATACAAACTCATCCTAGAATG
CTTTCATCCAAACTCAAAGCTAACCGAACCTCATGTATTCTGCACATACC
TTGACACCGACGGTTTAGATTGGCTCTCCGGGCGGGGTGGTTCGCTTTAT
GAGAATCCCGACACGACCCAGCAACTTGGGAAACTGAGTTCGGTGTATTC
TCGGTTCCGTCCTGAAGTCGTGGTAGAAGAAAGATTTAGCGGAACAAGGC
TAGTTCCCCTAAGAGACGATGAGCAAGAATCCGATCGGGACAACTTGGTT
GTCACGCGCCCTATAATCCTCAAGGACTCTGAAGACTTCTCTCAGCTATG
TATGGTTGTGAACATTGTGAAGGTCATGCCGGGTACGAATCTGCTTCTAA
GTGCACACACGGTTGAGGACGGGGTAATCAGGGTTTTCCGCGACTGGCTG
AGGGACGAAGAGAAGCGCTTCCGGGATATTGTACCTGATGGTACAGGGCC
TTCGCAAATGCTATGGGTCGATCAGAGCAAGGGTGTCGGCATCAAAGTGC
GGGTCAAGGCGAAACCGCTTATGAACCAAAATGTGCCAATTCTCGTCCAT
CGCGACGACGACGAATTCACGAGCTATGAATTGTTAATCGAAGGTATGAT
GATCCCTTCTCCTATTTTAACTTATTATAAAGCTGTAGTTATAACCCCCA
CCCTTGGATAGATGGACGACGCCCATCCAAAGCTCCACCTCTACTCTCTT
CCCAACGAAGTTCTCGGTCAGATTCTATCCTCTTTCTCGACGCGCTCCCT
CATCTCTTGGGCGACAGTTTCTCACCGCTTCTACGCCCTCGTCCTACGGA
TCCTACATTATCGCCTACTCATCGGCGCTCCACTGCATGAATACAAACTC
ATCCTAGAATGCTTTCATCCAAACTCAAAGCTAACCGAACCTCATGTATT
CTGCACATACCTTGACACCGACGGTTTAGATTGGCTCTCCGGGCGGGGTG
GTTCGCTTTATGAGAATCCCGACACGACCCAGCAACTTGGGAAACTGAGT
TCGGTGTATTCTCGGTTCCGTCCTGAAGTCGTGGTAGAAGAAAGATTTAG
CGGAACAAGGCTAGTTCCCCTAAGAGACGATGAGCAAGAATCCGATCGGG
ACAACTTGGTTGTCACGCGCCCTATAATCCTCAAGGACTCTGAAGACTTC
TCTCAGCTATGTATGGTTGTGAACATTGTGAAGGTCATGCCGGGTACGAA
TCTGCTTCTAAGTGCACACACGGTTGAGGACGGGGTAATCAGGGTTTTCC
GCGACTGGCTGAGGGACGAAGAGAAGCGCTTCCGGGATATTGTACCTGAT
GGTACAGGGCCTTCGCAAATGCTATGGGTCGATCAGAGCAAGGGTGTCGG
CATCAAAGTGCGGGTCAAGGCGAAACCGCTTATGAACCAAAATGTGCCAA
TTCTCGTCCATCGCGACGACGACGAATTCACGAGCTATGAATTGTTAATC
GAAGGTATGATGATCCCTTCTCCTATTTTAACTTATTATAAAGCTGTAGT
TATAACCCCCACCCTTGGATAGATGGACGACGCCCATCCAAAGCTCCACC
TCTACTCTCTTCCCAACGAAGTTCTCGGTCAGATTCTATCCTCTTTCTCG
ACGCGCTCCCTCATCTCTTGGGCGACAGTTTCTCACCGCTTCTACGCCCT
CGTCCTACGGATCCTACATTATCGCCTACTCATCGGCGCTCCACTGCATG
AATACAAACTCATCCTAGAATGCTTTCATCCAAACTCAAAGCTAACCGAA
CCTCATGTATTCTGCACATACCTTGACACCGACGGTTTAGATTGGCTCTC
CGGGCGGGGTGGTTCGCTTTATGAGAATCCCGACACGACCCAGCAACTTG
GGAAACTGAGTTCGGTGTATTCTCGGTTCCGTCCTGAAGTCGTGGTAGAA
GAAAGATTTAGCGGAACAAGGCTAGTTCCCCTAAGAGACGATGAGCAAGA
ATCCGATCGGGACAACTTGGTTGTCACGCGCCCTATAATCCTCAAGGACT
CTGAAGACTTCTCTCAGCTATGTATGGTTGTGAACATTGTGAAGGTCATG
CCGGGTACGAATCTGCTTCTAAGTGCACACACGGTTGAGGACGGGGTAAT
CAGGGTTTTCCGCGACTGGCTGAGGGACGAAGAGAAGCGCTTCCGGGATA
TTGTACCTGATGGTACAGGGCCTTCGCAAATGCTATGGGTCGATCAGAGC
AAGGGTGTCGGCATCAAAGTGCGGGTCAAGGCGAAACCGCTTATGAACCA
AAATGTGCCAATTCTCGTCCATCGCGACGACGACGAATTCACGAGCTATG
AATTGTTAATCGAAGGTATGATGATCCCTTCTCCTATTTTAACTTATTAT
AAAGCTGTAGTTATAACCCCCACCCTTGGATAGATGGACGACGCCCATCC
AAAGCTCCACCTCTACTCTCTTCCCAACGAAGTTCTCGGTCAGATTCTAT
CCTCTTTCTCGACGCGCTCCCTCATCTCTTGGGCGACAGTTTCTCACCGC
TTCTACGCCCTCGTCCTACGGATCCTACATTATCGCCTACTCATCGGCGC
TCCACTGCATGAATACAAACTCATCCTAGAATGCTTTCATCCAAACTCAA
AGCTAACCGAACCTCATGTATTCTGCACATACCTTGACACCGACGGTTTA
GATTGGCTCTCCGGGCGGGGTGGTTCGCTTTATGAGAATCCCGACACGAC
CCAGCAACTTGGGAAACTGAGTTCGGTGTATTCTCGGTTCCGTCCTGAAG
TCGTGGTAGAAGAAAGATTTAGCGGAACAAGGCTAGTTCCCCTAAGAGAC
GATGAGCAAGAATCCGATCGGGACAACTTGGTTGTCACGCGCCCTATAAT
CCTCAAGGACTCTGAAGACTTCTCTCAGCTATGTATGGTTGTGAACATTG
TGAAGGTCATGCCGGGTACGAATCTGCTTCTAAGTGCACACACGGTTGAG
GACGGGGTAATCAGGGTTTTCCGCGACTGGCTGAGGGACGAAGAGAAGCG
CTTCCGGGATATTGTACCTGATGGTACAGGGCCTTCGCAAATGCTATGGG
TCGATCAGAGCAAGGGTGTCGGCATCAAAGTGCGGGTCAAGGCGAAACCG
CTTATGAACCAAAATGTGCCAATTCTCGTCCATCGCGACGACGACGAATT
CACGAGCTATGAATTGTTAATCGAAGGTATGATGATCCCTTCTCCTATTT
TAACTTATTATAAAGCTGTAGTTATAACCCCCACCCTTGGATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_225675ASPNIDRAFT_225675Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_225675-T1.exon1ASPNIDRAFT_225675-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_225675-T1.exon2ASPNIDRAFT_225675-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_225675-T1.exon3ASPNIDRAFT_225675-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_225675-T1.exon4ASPNIDRAFT_225675-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_225675-T1.cdsASPNIDRAFT_225675-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_225675-T1ASPNIDRAFT_225675-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:931215..932285 +
Powered by Drupal