You are here

Home

ASPNIDRAFT_35307-T1, ASPNIDRAFT_35307-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_35307-T1
Unique NameASPNIDRAFT_35307-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:637204..639024-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_35307-T1 ID=ASPNIDRAFT_35307-T1|Name=ASPNIDRAFT_35307-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1821bp|location=Sequence derived from alignment at ACJE01000008.1:637204..639024- (Aspergillus niger ATCC 1015)
ACCTGATCCGGCAGCGCCGATGCCGCATGAGATACAGCAGAAAGTCAACT
CTTGGGTTTACAACTTTCTGCTCCCAACGTCAATTCCAGCTGCCTGATCT
TCTCTTGATATACAGGTCCCTTCGCTGGTGTCGCCTGCCTCCAACCTCTT
CCTCCTCCATCCCTGTTCCCATCTTCCCACCCCCAATTCCTTGCAATCCG
ATGGCGTTCGCACGTCTCGCCGCCCGGCGGTTGCCCGTCGCCCGTCGGCT
CGTCCCCAGCATTGACTCACTGCCTCAGCAGCGATTCTTCTCCATGTCGC
AACATGTGAAGTCTCAGAACAAGGCTTCTGTCCCGAACCCCGATCCTGCT
GCTGACTCCGTATCGGTCGCTTTCGTCAATGATCAATCTCCCTACATGTT
GCCGACCTACGTGCGGCCGGCGCCGGTCATGGTCAAGGGCCAGGGATGTT
ATCTGTGGGATATGGAGAACCGGAAATACCTCGACTTGACAGCTGGTATC
GCGGTCAACTCTCTGGGACACTGTGACCCCGAGGTGGCCCAGATCATCGC
TGAACAAGCCGAGGTGCTTGTCCACGCCTCGAACCTCTACTACAATGCGT
GGACTGGAGCTCTGAGCAAGCTCTTGATCGACGTTACTCAGAAGTCCGGT
GCCATGCGCGATGCCTCTCAGGTCTTTATCTGCAACTCTGGAACCGAAGC
CAACGAGGCCGCCATCAAGTTTGCCCGCAAGGTCGGTCGTTCGCTCGACC
CCTCCGGCGCAAAGCACGAAGTCGTCTCCTTCCACAACTCCTTCCACGGC
CGCACCATGGGTGCTCTTTCTGCGACCCCGAACCCCAAGTACCAGACTCC
CTTCTCCCCCATGCTGCCTGGCTTCAAGTACGGCAACTACAACGATGTGG
CTCAGCTCGAGAGTCTCGTCACTGAGAAGACTTGTGGTGTGATCGTCGAA
CCCATCCAGGGTGAGGGAGGTATCAATGTGGCTACCCCTGAATTCCTGGT
TGCTCTGCGCAAGCGCTGTGACGAGGTTGGCGCCGTTTTGATTTTCGACG
AGATCCAGTGCGGTCTCTCCCGCACCGGCTCCTTCTGGGCTCACGCCCAC
CCGTCTCTGGCGCCTGCTTCTGGCGAGGCCGCTCACCCCGACATCCTGAC
TTCTGCCAAGGCCCTGGGTAACGGTATCCCTATCGGTGCGACTATTGTCT
CCGAGAAGACCGTGGCCAAACACATCAAGCCCGGTGACCACGGTACCACC
TATGGTGGAAACCCCCTGGTGTGCCGTGTCGCCCATCACATTGTCAACCG
TTTGGCGGACCCCGAGCTGCAGAAGTCTGTTGAGATCAAGGGAGACCTGC
TGGTGTCTGGATTCAAGGATCTCCAGAAGAAGTTCCCCAACGTCATCTCG
GAAATTCGCGGACGGGGATTGATCCGTGGTCTCCAGCTCTCCCCGGAGTT
CGTCTCCAAGGCCGGTGATTTGGTTGGTGCTGCCCGGGAGCGCGGCATGC
TGATTATCACGGCAGGTGAGGGCTGCATCCGCTTTGTTCCTCCCTTGACC
ATCACCGAGGAGCAGATCAAGTCCGGCCTCAAGATTCTGGAGCAGGCTCT
GGAAGCCGTGGTTGCTCAGGCTTAAATTGGTCCGCGAGTGTTCCCAAAAC
GATCTACAACTAAAAGTTAATTACTGTTTCTCGGTCTGTGCATATATTCT
ACCTGTGACGTGACATGATCTATGCTACTGGATCCCGGGACATTTATATC
TATGTTATTTCTTATTTTGATACCTGCTACATTGGTACATAGACGGCGGG
ATAGAACTTAGAATTGACGAT
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:637204..639024-

>ASPNIDRAFT_35307-T1 ID=ASPNIDRAFT_35307-T1|Name=ASPNIDRAFT_35307-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1425bp|location=Sequence derived from alignment at ACJE01000008.1:637204..639024- (Aspergillus niger ATCC 1015)
ATGGCGTTCGCACGTCTCGCCGCCCGGCGGTTGCCCGTCGCCCGTCGGCT
CGTCCCCAGCATTGACTCACTGCCTCAGCAGCGATTCTTCTCCATGTCGC
AACATGTGAAGTCTCAGAACAAGGCTTCTGTCCCGAACCCCGATCCTGCT
GCTGACTCCGTATCGGTCGCTTTCGTCAATGATCAATCTCCCTACATGTT
GCCGACCTACGTGCGGCCGGCGCCGGTCATGGTCAAGGGCCAGGGATGTT
ATCTGTGGGATATGGAGAACCGGAAATACCTCGACTTGACAGCTGGTATC
GCGGTCAACTCTCTGGGACACTGTGACCCCGAGGTGGCCCAGATCATCGC
TGAACAAGCCGAGGTGCTTGTCCACGCCTCGAACCTCTACTACAATGCGT
GGACTGGAGCTCTGAGCAAGCTCTTGATCGACGTTACTCAGAAGTCCGGT
GCCATGCGCGATGCCTCTCAGGTCTTTATCTGCAACTCTGGAACCGAAGC
CAACGAGGCCGCCATCAAGTTTGCCCGCAAGGTCGGTCGTTCGCTCGACC
CCTCCGGCGCAAAGCACGAAGTCGTCTCCTTCCACAACTCCTTCCACGGC
CGCACCATGGGTGCTCTTTCTGCGACCCCGAACCCCAAGTACCAGACTCC
CTTCTCCCCCATGCTGCCTGGCTTCAAGTACGGCAACTACAACGATGTGG
CTCAGCTCGAGAGTCTCGTCACTGAGAAGACTTGTGGTGTGATCGTCGAA
CCCATCCAGGGTGAGGGAGGTATCAATGTGGCTACCCCTGAATTCCTGGT
TGCTCTGCGCAAGCGCTGTGACGAGGTTGGCGCCGTTTTGATTTTCGACG
AGATCCAGTGCGGTCTCTCCCGCACCGGCTCCTTCTGGGCTCACGCCCAC
CCGTCTCTGGCGCCTGCTTCTGGCGAGGCCGCTCACCCCGACATCCTGAC
TTCTGCCAAGGCCCTGGGTAACGGTATCCCTATCGGTGCGACTATTGTCT
CCGAGAAGACCGTGGCCAAACACATCAAGCCCGGTGACCACGGTACCACC
TATGGTGGAAACCCCCTGGTGTGCCGTGTCGCCCATCACATTGTCAACCG
TTTGGCGGACCCCGAGCTGCAGAAGTCTGTTGAGATCAAGGGAGACCTGC
TGGTGTCTGGATTCAAGGATCTCCAGAAGAAGTTCCCCAACGTCATCTCG
GAAATTCGCGGACGGGGATTGATCCGTGGTCTCCAGCTCTCCCCGGAGTT
CGTCTCCAAGGCCGGTGATTTGGTTGGTGCTGCCCGGGAGCGCGGCATGC
TGATTATCACGGCAGGTGAGGGCTGCATCCGCTTTGTTCCTCCCTTGACC
ATCACCGAGGAGCAGATCAAGTCCGGCCTCAAGATTCTGGAGCAGGCTCT
GGAAGCCGTGGTTGCTCAGGCTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006525arginine metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008483transaminase activity
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARG8ASPNIDRAFT_35307Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35307-T1.cdsASPNIDRAFT_35307-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35307-T1.utr3p1ASPNIDRAFT_35307-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35307-T1.exon1ASPNIDRAFT_35307-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35307-T1.utr5p1ASPNIDRAFT_35307-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35307-T1ASPNIDRAFT_35307-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262OX9
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR004636
DBxrefInterPro:IPR015421
DBxrefInterPro:IPR005814
DBxrefInterPro:IPR015422
DBxrefPFAM:PF00202
Productacetylornithine aminotransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:637204..639024 -
Powered by Drupal