You are here

Home

ASPNIDRAFT_35365-T1, ASPNIDRAFT_35365-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_35365-T1
Unique NameASPNIDRAFT_35365-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3751895..3752411-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_35365-T1 ID=ASPNIDRAFT_35365-T1|Name=ASPNIDRAFT_35365-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=517bp|location=Sequence derived from alignment at ACJE01000004.1:3751895..3752411- (Aspergillus niger ATCC 1015)
ATGACCAACACTCAGTTTGGCGAAGAATGCGACATTGTCGCTGTCCTGAC
CCCTAAGCCTGGCAAATTGGATCGAGTGGGTTACCCTCCACGGTGGCCGC
AGGGACCTATTCTGCTACACTGTGCCTCTCGAACTTACTGACTTAATCAT
GTCTGTAGGTTGCTGAGCTTCTCACCAAGCTTACCGCATGTGTCAAGAAG
AATGAACCCGGTGTTTTGAGTTTCCACTTGTACAAAGACTTCGATCGTGA
GACCGGTCAAGAGGAGCTGGTTTTGGTTGAGAAGTAAGCTTCTGTCCTTT
TTCCTTATTCATATTTTTTCTTTTCCGTTTTTCTCTTGACTCGCCCGGTC
GCACGCATGCTGACTCTGCTAGATACGTCAACAAAGAGGCATATGATCTT
CACGCCGAACTGCCCGACTTCCAAGCCATGCATGCTACTTTCCGCTCCGA
GGAACTCATGGCCAAACCCATCCTGATCAAGAGTGTGAAGCCATTGGTGG
GGTTTGAGCGGAGCTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:3751895..3752411-

>ASPNIDRAFT_35365-T1 ID=ASPNIDRAFT_35365-T1|Name=ASPNIDRAFT_35365-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1035bp|location=Sequence derived from alignment at ACJE01000004.1:3751895..3752411- (Aspergillus niger ATCC 1015)
ATACGTCAACAAAGAGGCATATGATCTTCACGCCGAACTGCCCGACTTCC
AAGCCATGCATGCTACTTTCCGCTCCGAGGAACTCATGGCCAAACCCATC
CTGATCAAGAGTGTGAAGCCATTGGTGGGGTTTGAGCGGAGCTAGGTTGC
TGAGCTTCTCACCAAGCTTACCGCATGTGTCAAGAAGAATGAACCCGGTG
TTTTGAGTTTCCACTTGTACAAAGACTTCGATCGTGAGACCGGTCAAGAG
GAGCTGGTTTTGGTTGAGAAATGACCAACACTCAGTTTGGCGAAGAATGC
GACATTGTCGCTGTCCTGACCCCTAAGCCTGGCAAATTGGATCGAATACG
TCAACAAAGAGGCATATGATCTTCACGCCGAACTGCCCGACTTCCAAGCC
ATGCATGCTACTTTCCGCTCCGAGGAACTCATGGCCAAACCCATCCTGAT
CAAGAGTGTGAAGCCATTGGTGGGGTTTGAGCGGAGCTAGGTTGCTGAGC
TTCTCACCAAGCTTACCGCATGTGTCAAGAAGAATGAACCCGGTGTTTTG
AGTTTCCACTTGTACAAAGACTTCGATCGTGAGACCGGTCAAGAGGAGCT
GGTTTTGGTTGAGAAATGACCAACACTCAGTTTGGCGAAGAATGCGACAT
TGTCGCTGTCCTGACCCCTAAGCCTGGCAAATTGGATCGAATACGTCAAC
AAAGAGGCATATGATCTTCACGCCGAACTGCCCGACTTCCAAGCCATGCA
TGCTACTTTCCGCTCCGAGGAACTCATGGCCAAACCCATCCTGATCAAGA
GTGTGAAGCCATTGGTGGGGTTTGAGCGGAGCTAGGTTGCTGAGCTTCTC
ACCAAGCTTACCGCATGTGTCAAGAAGAATGAACCCGGTGTTTTGAGTTT
CCACTTGTACAAAGACTTCGATCGTGAGACCGGTCAAGAGGAGCTGGTTT
TGGTTGAGAAATGACCAACACTCAGTTTGGCGAAGAATGCGACATTGTCG
CTGTCCTGACCCCTAAGCCTGGCAAATTGGATCGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35365ASPNIDRAFT_35365Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35365-T1ASPNIDRAFT_35365-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35365-T1.cdsASPNIDRAFT_35365-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35365-T1.exon3ASPNIDRAFT_35365-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_35365-T1.exon2ASPNIDRAFT_35365-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_35365-T1.exon1ASPNIDRAFT_35365-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011008
DBxrefInterPro:IPR007138
DBxrefPFAM:PF03992
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3751895..3752411 -
Powered by Drupal