You are here

Home

ASPNIDRAFT_35440-T1, ASPNIDRAFT_35440-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_35440-T1
Unique NameASPNIDRAFT_35440-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3530520..3532160+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_35440-T1 ID=ASPNIDRAFT_35440-T1|Name=ASPNIDRAFT_35440-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1641bp|location=Sequence derived from alignment at ACJE01000004.1:3530520..3532160+ (Aspergillus niger ATCC 1015)
ATGGCCCTGTGCCTGTCCAGCCGTTCTGCCCTGTGTTGCCGGAAGTTCGC
AGTCTCCCCTCATGGGGAGAAGGTAGGATTGATGGAAGTCTCGTTGCGGG
CCACTGGTCGTCGTAAGACCGGTCCCAGGCAGTTTTCGCAGTCCTGGAAA
CAGTATCAACATCAAAACTCCCACGAAAACCCTTCCCCTCGAAGCACCTT
TGGCTCCCGACTCCGTTTTGCCCTGCGGAACACCAAAGTCGAATGGTATC
CCATCCCCGTCGGTCTCGGTATCGGCTTGCTTGGCTTGCTACAGTTTTAC
AAGGCCCAGCGGGCGGAACGTGAACGTGCAGAAAGAGAAGCTGCCGGCGA
GACTTTTGATTTCGAAAAAGCTCCTCCCCGACCAAAGCACCGACTGAGCG
GACCATGGCAGGTCCAGATTATGTCTACCCTGCCGCTCAAGGCCATGTCG
CGGCTTTGGGGACGGTTCAATGAGATCGAGCTGCCTTATTATTTCCGTGT
TCCAGGATTCAAGCTCTACTCTTGGATCTTTGGTGTCAACCTGGACGAGG
TTGCGGAACCAGACCTTCATACCTATCCCAACCTGGCGGCCTTCTTCTAT
CGCAAACTGAAACCGGGTGTTCGGCCTCTGGACCCTGACACTCGCGCTGT
TCTCGCACCCTCCGATGGACGTATCCTACAATTTGGATTGATTGAACGTG
GTGAGGTCGAACAGGTCAAGGGCGTCACATACAGCTTGGATGCCCTGTTG
GGTGCCGCGACCCCGAACCATGCAGACCACACGGATAAGTTCACAGACCA
CCAGAGCGAGCCGGCTCATGGAACCGAAGCAAAAATGCTGGCGGACGCGG
AGTTCGCCAAAATGAACGGCATCTCATATACGCTTCCCACGCTCCTTGCA
GGAGACCAGGGTGGCGCCCGGAAGCGTTCTGCATCCATTGATGCGTCCAC
CCCATACAAGGCCTCTGCCGAAGCCGAAGTCAAGGCTGATCTGGCTCGAG
GGGATGGTGCGCCATGGTACGCCCCGAAGCCGACGTCCAACAATGCTCTC
TACTATGTCGTGATCTACCTTGCTCCGGGTGATTACCACCGTTTCCATTC
GCCAGTGCCGTGGGTGGTGCAGAGTCGCCGACACTTTGCGGGTGAACTGT
TCTCGGTGTCCCCGTACCTGCAGCGCCACCTACCAGGTCTCTTCACCCTC
AACGAGCGTGTCGTGCTGCTGGGCCGCTGGCGTTGGGGTTTCTTCAGCTA
TACCCCTGTGGGTGCCACGAACGTTGGCTCGATCAAGGTGAACTTTGACG
CAGAGCTGCGGACCAACAGCCTTACGACGGACACCGCGGCCGACATGGCA
GCCGCCGCTGCGGCCAAGCGTGGTGAGCAGTATCCTGGATTCGTTGAGGC
CACTTACCTCCACGCCAGCCAAACCCTGGGAGGTCACCCTCTGCAGCGTG
GTGAGGAAATGGGCGGATTCCAACTTGGTAGCTCAATCGTGCTGGTGTTC
GAGGCGCCGGTGGGCACTCGTAAGTCATTCGACGCGGGCTGGGAAGAGGG
CCGACGCGAGGGAGGATTCAACTGGACCATTGAGAAGGGACAGCGCATTA
AGATGGGAGAGAAACTCGGATTCGTTGACGTTGAACATTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:3530520..3532160+

>ASPNIDRAFT_35440-T1 ID=ASPNIDRAFT_35440-T1|Name=ASPNIDRAFT_35440-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1641bp|location=Sequence derived from alignment at ACJE01000004.1:3530520..3532160+ (Aspergillus niger ATCC 1015)
ATGGCCCTGTGCCTGTCCAGCCGTTCTGCCCTGTGTTGCCGGAAGTTCGC
AGTCTCCCCTCATGGGGAGAAGGTAGGATTGATGGAAGTCTCGTTGCGGG
CCACTGGTCGTCGTAAGACCGGTCCCAGGCAGTTTTCGCAGTCCTGGAAA
CAGTATCAACATCAAAACTCCCACGAAAACCCTTCCCCTCGAAGCACCTT
TGGCTCCCGACTCCGTTTTGCCCTGCGGAACACCAAAGTCGAATGGTATC
CCATCCCCGTCGGTCTCGGTATCGGCTTGCTTGGCTTGCTACAGTTTTAC
AAGGCCCAGCGGGCGGAACGTGAACGTGCAGAAAGAGAAGCTGCCGGCGA
GACTTTTGATTTCGAAAAAGCTCCTCCCCGACCAAAGCACCGACTGAGCG
GACCATGGCAGGTCCAGATTATGTCTACCCTGCCGCTCAAGGCCATGTCG
CGGCTTTGGGGACGGTTCAATGAGATCGAGCTGCCTTATTATTTCCGTGT
TCCAGGATTCAAGCTCTACTCTTGGATCTTTGGTGTCAACCTGGACGAGG
TTGCGGAACCAGACCTTCATACCTATCCCAACCTGGCGGCCTTCTTCTAT
CGCAAACTGAAACCGGGTGTTCGGCCTCTGGACCCTGACACTCGCGCTGT
TCTCGCACCCTCCGATGGACGTATCCTACAATTTGGATTGATTGAACGTG
GTGAGGTCGAACAGGTCAAGGGCGTCACATACAGCTTGGATGCCCTGTTG
GGTGCCGCGACCCCGAACCATGCAGACCACACGGATAAGTTCACAGACCA
CCAGAGCGAGCCGGCTCATGGAACCGAAGCAAAAATGCTGGCGGACGCGG
AGTTCGCCAAAATGAACGGCATCTCATATACGCTTCCCACGCTCCTTGCA
GGAGACCAGGGTGGCGCCCGGAAGCGTTCTGCATCCATTGATGCGTCCAC
CCCATACAAGGCCTCTGCCGAAGCCGAAGTCAAGGCTGATCTGGCTCGAG
GGGATGGTGCGCCATGGTACGCCCCGAAGCCGACGTCCAACAATGCTCTC
TACTATGTCGTGATCTACCTTGCTCCGGGTGATTACCACCGTTTCCATTC
GCCAGTGCCGTGGGTGGTGCAGAGTCGCCGACACTTTGCGGGTGAACTGT
TCTCGGTGTCCCCGTACCTGCAGCGCCACCTACCAGGTCTCTTCACCCTC
AACGAGCGTGTCGTGCTGCTGGGCCGCTGGCGTTGGGGTTTCTTCAGCTA
TACCCCTGTGGGTGCCACGAACGTTGGCTCGATCAAGGTGAACTTTGACG
CAGAGCTGCGGACCAACAGCCTTACGACGGACACCGCGGCCGACATGGCA
GCCGCCGCTGCGGCCAAGCGTGGTGAGCAGTATCCTGGATTCGTTGAGGC
CACTTACCTCCACGCCAGCCAAACCCTGGGAGGTCACCCTCTGCAGCGTG
GTGAGGAAATGGGCGGATTCCAACTTGGTAGCTCAATCGTGCTGGTGTTC
GAGGCGCCGGTGGGCACTCGTAAGTCATTCGACGCGGGCTGGGAAGAGGG
CCGACGCGAGGGAGGATTCAACTGGACCATTGAGAAGGGACAGCGCATTA
AGATGGGAGAGAAACTCGGATTCGTTGACGTTGAACATTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Vocabulary: Biological Process
TermDefinition
GO:0008654phospholipid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004609phosphatidylserine decarboxylase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35440ASPNIDRAFT_35440Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35440-T1.exon1ASPNIDRAFT_35440-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35440-T1.cdsASPNIDRAFT_35440-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35440-T1ASPNIDRAFT_35440-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092639H5
DBxrefInterPro:IPR033661
DBxrefInterPro:IPR033177
DBxrefInterPro:IPR003817
DBxrefPFAM:PF02666
Productphosphatidylserine decarboxylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3530520..3532160 +
Powered by Drupal