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ASPNIDRAFT_35474-T1, ASPNIDRAFT_35474-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_35474-T1
Unique NameASPNIDRAFT_35474-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3418695..3419821-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_35474-T1 ID=ASPNIDRAFT_35474-T1|Name=ASPNIDRAFT_35474-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1127bp|location=Sequence derived from alignment at ACJE01000004.1:3418695..3419821- (Aspergillus niger ATCC 1015)
ATGCTCCACTTCCGCACGGAAGGCTTCAACGGCTGCGCAGTCAAGTACTC
ACCCTTCTTCGATAACCGCCTCGCCGTCGCCTCATCCGCCAATTTCGGCC
TAGTCGGCAATGGCCGTCTCTACATTCTTGAACTGACTCCGAACGGAATA
GTTCCCTACAAATGGTATCCCTTCCCCCATCCCCCACCTATCCCCAACCA
AACTAACCAACCCACCAAAAACCCAGGTTCACAACCCAAGACTCCCTCTA
CGACCTCGCCTGGTCCGAAATACATGAAAACCAAGTTCTAACCGCCTCCG
GCGACGGAAGCATCAAGCTCTTCGATACGGAGGTCGCCGACTTCCCAATT
CAAAACTGGAAAGAGCACAACCGCGAAGTCTTCAGCGTGCACTGGAACCT
CGTCGCGAAGGACCGTTTCTGCAGTAGTAGTTGGGACGGGACAGTGCGCG
TGTGGACGCCCAATCGCCCACATTCCCTCCTCACTCTGCCGACGCATAGC
TGCACGTACAGCGCGGCGTTTTCTCCGCATTCGCCAGATATTTTGTCGTG
TGTGTCGTCAGATTCGTATCTACGGGTGTTTGATCTACGGACGCCGGCGT
CGGCGTCGAATCATTTGACTTTGCAGGTGCCGATTCATGGAGGTGGTGGT
GGAGGGGTAGTGCCGGGTGGGGGACCGATGGCGGCGACGGCGCCGGCGGA
GGCGTTGACGATGGATTGGAACAAGTATCGGCCGTCGACGATAGCTACGG
CGGGGGTGGATCGGACGATTCGCACGTTTGATATTCGGGCGCCAGGGCAG
GGGCCGCAGACGGTGATGCTGGGACATGAGTATGCGGTTAGGAAGGTGGC
GTGGTCGCCGCATTTGTCGGATGTGTTGTTGAGTGCCAGTTATGATATGA
CGTGTCGGGCTTGGAGTGATCAGACGCCGCCGGGGGCGGTTGGCGATGTC
GATGTGATGCGGGCTGGGCCGGGACCGAATATGGGGGTGGAGTTGGGGAG
GATGGGCCGGCATACGGAGTTTGTGACGGGGGTGGATTGGTGTTTGTTTG
GGAGTGAGGGATGGTGTGCGAGTGTGGGATGGGATGAGAGTTTGTATGTG
TGGGATGTGAGGGCCGTGATGGGGTAA
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Coding sequence (CDS) from alignment at ACJE01000004.1:3418695..3419821-

>ASPNIDRAFT_35474-T1 ID=ASPNIDRAFT_35474-T1|Name=ASPNIDRAFT_35474-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2130bp|location=Sequence derived from alignment at ACJE01000004.1:3418695..3419821- (Aspergillus niger ATCC 1015)
GTTCACAACCCAAGACTCCCTCTACGACCTCGCCTGGTCCGAAATACATG
AAAACCAAGTTCTAACCGCCTCCGGCGACGGAAGCATCAAGCTCTTCGAT
ACGGAGGTCGCCGACTTCCCAATTCAAAACTGGAAAGAGCACAACCGCGA
AGTCTTCAGCGTGCACTGGAACCTCGTCGCGAAGGACCGTTTCTGCAGTA
GTAGTTGGGACGGGACAGTGCGCGTGTGGACGCCCAATCGCCCACATTCC
CTCCTCACTCTGCCGACGCATAGCTGCACGTACAGCGCGGCGTTTTCTCC
GCATTCGCCAGATATTTTGTCGTGTGTGTCGTCAGATTCGTATCTACGGG
TGTTTGATCTACGGACGCCGGCGTCGGCGTCGAATCATTTGACTTTGCAG
GTGCCGATTCATGGAGGTGGTGGTGGAGGGGTAGTGCCGGGTGGGGGACC
GATGGCGGCGACGGCGCCGGCGGAGGCGTTGACGATGGATTGGAACAAGT
ATCGGCCGTCGACGATAGCTACGGCGGGGGTGGATCGGACGATTCGCACG
TTTGATATTCGGGCGCCAGGGCAGGGGCCGCAGACGGTGATGCTGGGACA
TGAGTATGCGGTTAGGAAGGTGGCGTGGTCGCCGCATTTGTCGGATGTGT
TGTTGAGTGCCAGTTATGATATGACGTGTCGGGCTTGGAGTGATCAGACG
CCGCCGGGGGCGGTTGGCGATGTCGATGTGATGCGGGCTGGGCCGGGACC
GAATATGGGGGTGGAGTTGGGGAGGATGGGCCGGCATACGGAGTTTGTGA
CGGGGGTGGATTGGTGTTTGTTTGGGAGTGAGGGATGGTGTGCGAGTGTG
GGATGGGATGAGAGTTTGTATGTGTGGGATGTGAGGGCCGTGATGGGGTA
AATGCTCCACTTCCGCACGGAAGGCTTCAACGGCTGCGCAGTCAAGTACT
CACCCTTCTTCGATAACCGCCTCGCCGTCGCCTCATCCGCCAATTTCGGC
CTAGTCGGCAATGGCCGTCTCTACATTCTTGAACTGACTCCGAACGGAAT
AGTTCCCTACAAATGGTTCACAACCCAAGACTCCCTCTACGACCTCGCCT
GGTCCGAAATACATGAAAACCAAGTTCTAACCGCCTCCGGCGACGGAAGC
ATCAAGCTCTTCGATACGGAGGTCGCCGACTTCCCAATTCAAAACTGGAA
AGAGCACAACCGCGAAGTCTTCAGCGTGCACTGGAACCTCGTCGCGAAGG
ACCGTTTCTGCAGTAGTAGTTGGGACGGGACAGTGCGCGTGTGGACGCCC
AATCGCCCACATTCCCTCCTCACTCTGCCGACGCATAGCTGCACGTACAG
CGCGGCGTTTTCTCCGCATTCGCCAGATATTTTGTCGTGTGTGTCGTCAG
ATTCGTATCTACGGGTGTTTGATCTACGGACGCCGGCGTCGGCGTCGAAT
CATTTGACTTTGCAGGTGCCGATTCATGGAGGTGGTGGTGGAGGGGTAGT
GCCGGGTGGGGGACCGATGGCGGCGACGGCGCCGGCGGAGGCGTTGACGA
TGGATTGGAACAAGTATCGGCCGTCGACGATAGCTACGGCGGGGGTGGAT
CGGACGATTCGCACGTTTGATATTCGGGCGCCAGGGCAGGGGCCGCAGAC
GGTGATGCTGGGACATGAGTATGCGGTTAGGAAGGTGGCGTGGTCGCCGC
ATTTGTCGGATGTGTTGTTGAGTGCCAGTTATGATATGACGTGTCGGGCT
TGGAGTGATCAGACGCCGCCGGGGGCGGTTGGCGATGTCGATGTGATGCG
GGCTGGGCCGGGACCGAATATGGGGGTGGAGTTGGGGAGGATGGGCCGGC
ATACGGAGTTTGTGACGGGGGTGGATTGGTGTTTGTTTGGGAGTGAGGGA
TGGTGTGCGAGTGTGGGATGGGATGAGAGTTTGTATGTGTGGGATGTGAG
GGCCGTGATGGGGTAAATGCTCCACTTCCGCACGGAAGGCTTCAACGGCT
GCGCAGTCAAGTACTCACCCTTCTTCGATAACCGCCTCGCCGTCGCCTCA
TCCGCCAATTTCGGCCTAGTCGGCAATGGCCGTCTCTACATTCTTGAACT
GACTCCGAACGGAATAGTTCCCTACAAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35474ASPNIDRAFT_35474Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35474-T1ASPNIDRAFT_35474-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35474-T1.cdsASPNIDRAFT_35474-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35474-T1.exon2ASPNIDRAFT_35474-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_35474-T1.exon1ASPNIDRAFT_35474-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09262VOC
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
ProductWD40 repeat-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3418695..3419821 -
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