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ASPNIDRAFT_35805-T1, ASPNIDRAFT_35805-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_35805-T1
Unique NameASPNIDRAFT_35805-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2352414..2353336-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_35805-T1 ID=ASPNIDRAFT_35805-T1|Name=ASPNIDRAFT_35805-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=923bp|location=Sequence derived from alignment at ACJE01000004.1:2352414..2353336- (Aspergillus niger ATCC 1015)
ATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATAC
TTCTCCTACAGAGAATAACTCAAGGTATGCATTAGATATCCCTAATCAGT
TAGGAACTGCCCTTATAAAGTGACATTGACTCATTCCCACCACCCACAAA
CAGACCAACAGACCATCCCACACCATCAAGACAACCTCATCAACACTCAA
CACCAACAAAATCACCACCCCACAACCGCCACCGTCTACACGAATTGTAC
GAACAATTCCCCCCAAGCAAACCTCCTCCATCAATACGACCCCCTAACCC
ACACACCTCCAGCTTCATCGGCAAAACCGGCGGCCAAATCTTCCACGAAA
TGATGCGCCTCCACAACGTCAAACACATCTGTAAGCCTGTCTCTCCCCTT
CCCTCTTTCCAACTATACACCCTCCCAACTAACCACCACCACCACCATCT
CCCTCCCTTTAGTCGGCTACCCAGGCGGCACCATCCTCCCCATCCTGGAC
GCGCTCTACGCCTCCCCGCATCTAACATTCATCCTCCCCAAACACGAGCA
ATCAGCCGGCCACATGGCCGAAGGCTACGCGCGCGCCTCGATCTCCTCAT
ATCCCACCCCCGGCATCGTCCTCGTAACCTCCGGCCCCGGCGCAACGAAT
CTCATCACGCCGCTGCAGAACGCCCTCAGCGACGGCACCCCGCTCATTGC
TTTCTGTGGACAGGTGGCGACGAGCGCCATCGGGAAGGACGGGTTCCAGG
AGGCGGATGTGTTGGGGATGACGAGATTTTGTACGAAGTGGAATGTGGGC
GTTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGAGGAGGCGTTTTGGGT
GGCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGGAGGTGCCCAAGGATG
TGGGGGCGGGGGTTTATTCTTGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:2352414..2353336-

>ASPNIDRAFT_35805-T1 ID=ASPNIDRAFT_35805-T1|Name=ASPNIDRAFT_35805-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2286bp|location=Sequence derived from alignment at ACJE01000004.1:2352414..2353336- (Aspergillus niger ATCC 1015)
TCGGCTACCCAGGCGGCACCATCCTCCCCATCCTGGACGCGCTCTACGCC
TCCCCGCATCTAACATTCATCCTCCCCAAACACGAGCAATCAGCCGGCCA
CATGGCCGAAGGCTACGCGCGCGCCTCGATCTCCTCATATCCCACCCCCG
GCATCGTCCTCGTAACCTCCGGCCCCGGCGCAACGAATCTCATCACGCCG
CTGCAGAACGCCCTCAGCGACGGCACCCCGCTCATTGCTTTCTGTGGACA
GGTGGCGACGAGCGCCATCGGGAAGGACGGGTTCCAGGAGGCGGATGTGT
TGGGGATGACGAGATTTTGTACGAAGTGGAATGTGGGCGTTAAGCATGTG
AGGGAGTTGCCGCAGAGGATTGAGGAGGCGTTTTGGGTGGCGTTGAGTGG
GAGGATGGGGCCTGTGGTCGTGGAGGTGCCCAAGGATGTGGGGGCGGGGG
TTTATTCTTGAACCAACAGACCATCCCACACCATCAAGACAACCTCATCA
ACACTCAACACCAACAAAATCACCACCCCACAACCGCCACCGTCTACACG
AATTGTACGAACAATTCCCCCCAAGCAAACCTCCTCCATCAATACGACCC
CCTAACCCACACACCTCCAGCTTCATCGGCAAAACCGGCGGCCAAATCTT
CCACGAAATGATGCGCCTCCACAACGTCAAACACATCTATGGGGATGGCA
CTCAGCTCGAAGATTCAAACGATTGATGATGAGAATACTTCTCCTACAGA
GAATAACTCAAGTCGGCTACCCAGGCGGCACCATCCTCCCCATCCTGGAC
GCGCTCTACGCCTCCCCGCATCTAACATTCATCCTCCCCAAACACGAGCA
ATCAGCCGGCCACATGGCCGAAGGCTACGCGCGCGCCTCGATCTCCTCAT
ATCCCACCCCCGGCATCGTCCTCGTAACCTCCGGCCCCGGCGCAACGAAT
CTCATCACGCCGCTGCAGAACGCCCTCAGCGACGGCACCCCGCTCATTGC
TTTCTGTGGACAGGTGGCGACGAGCGCCATCGGGAAGGACGGGTTCCAGG
AGGCGGATGTGTTGGGGATGACGAGATTTTGTACGAAGTGGAATGTGGGC
GTTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGAGGAGGCGTTTTGGGT
GGCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGGAGGTGCCCAAGGATG
TGGGGGCGGGGGTTTATTCTTGAACCAACAGACCATCCCACACCATCAAG
ACAACCTCATCAACACTCAACACCAACAAAATCACCACCCCACAACCGCC
ACCGTCTACACGAATTGTACGAACAATTCCCCCCAAGCAAACCTCCTCCA
TCAATACGACCCCCTAACCCACACACCTCCAGCTTCATCGGCAAAACCGG
CGGCCAAATCTTCCACGAAATGATGCGCCTCCACAACGTCAAACACATCT
ATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATAC
TTCTCCTACAGAGAATAACTCAAGTCGGCTACCCAGGCGGCACCATCCTC
CCCATCCTGGACGCGCTCTACGCCTCCCCGCATCTAACATTCATCCTCCC
CAAACACGAGCAATCAGCCGGCCACATGGCCGAAGGCTACGCGCGCGCCT
CGATCTCCTCATATCCCACCCCCGGCATCGTCCTCGTAACCTCCGGCCCC
GGCGCAACGAATCTCATCACGCCGCTGCAGAACGCCCTCAGCGACGGCAC
CCCGCTCATTGCTTTCTGTGGACAGGTGGCGACGAGCGCCATCGGGAAGG
ACGGGTTCCAGGAGGCGGATGTGTTGGGGATGACGAGATTTTGTACGAAG
TGGAATGTGGGCGTTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGAGGA
GGCGTTTTGGGTGGCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGGAGG
TGCCCAAGGATGTGGGGGCGGGGGTTTATTCTTGAACCAACAGACCATCC
CACACCATCAAGACAACCTCATCAACACTCAACACCAACAAAATCACCAC
CCCACAACCGCCACCGTCTACACGAATTGTACGAACAATTCCCCCCAAGC
AAACCTCCTCCATCAATACGACCCCCTAACCCACACACCTCCAGCTTCAT
CGGCAAAACCGGCGGCCAAATCTTCCACGAAATGATGCGCCTCCACAACG
TCAAACACATCTATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGA
TGATGAGAATACTTCTCCTACAGAGAATAACTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0030976thiamine pyrophosphate binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ILV1_1ASPNIDRAFT_35805Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35805-T1ASPNIDRAFT_35805-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35805-T1.cdsASPNIDRAFT_35805-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35805-T1.exon3ASPNIDRAFT_35805-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_35805-T1.exon2ASPNIDRAFT_35805-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_35805-T1.exon1ASPNIDRAFT_35805-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR012001
DBxrefPFAM:PF02776
Productthreonine deaminase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2352414..2353336 -
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