You are here

Home

ASPNIDRAFT_35842-T1, ASPNIDRAFT_35842-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_35842-T1
Unique NameASPNIDRAFT_35842-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2238864..2241235-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_35842-T1 ID=ASPNIDRAFT_35842-T1|Name=ASPNIDRAFT_35842-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2372bp|location=Sequence derived from alignment at ACJE01000004.1:2238864..2241235- (Aspergillus niger ATCC 1015)
ATGGCGACCCCATCGTCCAAGCCAAACCCAGGAGCGACTCCGACGCATCT
GACCTCGTCGCCTCGTCCGTCTGGTGCTCATATGGCCCGCCCGATTTCTC
ACAAATCGCCGTCAACGAGGACGCCTTCAGCTTCCGGTCATGGACACAAC
CAACCCCCCACTTCGATGCACCAATATTCTACCCCTCTCGCTGTGACTAC
CGGAGCGGAGGACCCCGTTACGTTCAGTTCCCCGTCCGCTCTCCTCGCGC
TTGGTGGCTACAGCGGAATCAGTCCGTCCCCCGCCGGGCACGATGGGCTT
GTCGGCGCAGGCATGAACGAGAATGATATCCAGGCATTGGGCATGCCGGG
TCTGAAGCTCGGGGGTGCTCGCGACAGCGAGGAGGAGCGCAGAAGACATA
TCGACGATGTGGTCCAGCTTCTACGAGCCCGAGTCTCGGGGCGGGGCGTT
TGCAGAGAGGGTATTGAGCGGCTGAGTGATCTCGAAGGGTTCGAGTCGAT
CTGGCAGGAGGACAGTCTCAGCATTGCGGGGAACTTTGTCGACCTGGAGA
TCGACTTCCATCGGGGGTATAATGTGGTGAAGGACGTTAGCTTGAAGTAT
GCGACGCCCGATGCGCAGGATGGGGAACAGCGCGACGAGGCTACGGCGGT
GCTTAAGCGCGACCTGATCCAGTCGCCGGAGGAAGGAGACCGGGGTGCTT
GGAAGTCGTTGCGGGGGTTCCATGAGAATCTACAGTGGCTTGCCAAACAT
GATCGGCTTAGTCAGGAGGTCAATTGTTTCGAGGCCATCGAAGGTCTTTA
CGAGAGCTTGAAGCGCGTGTGGGAGGCGGAGTGGAACCATCGCAAGTTCG
CGGGGGTGTACGACCATCTTTGCAGTGGCTGGGTTGGCCAGCCGTGTATG
CACAAGGGGAGTCGCATTGGTCTCAGCTTGGATTACTGGGTGCAGCAAGC
ACGGGTTCTGGATGCGAAGGAGAAGCAGAAGACGTCGTCTGATGCGATGG
TGGTTGATGCACCGAATGGACAACCGTCGGATGATGATTCGAGCAGCTTG
GAAGGGAAATGGAGCATTGTGGTGGAGTGCGAAGAGGGTTACCCATCCCT
CCGTGTGTCGAAGGACTGGGTTGGATCCGAAGTGTTAACTGGGGTCAATA
ACAATGACAATGGGCCGTCGTCGAGTGAGGCGCATGGGTCTGAAGCTGCA
GTTGTCAACTGGGTTGATCCTCCGGCGACGTTGACCAACAACCAAGGTCA
CCCGGACGCCATGGCACTTGACTCGAATATGCTGGGTTCTTCTGCTCCTA
ATCGTCGCTTCGTTGCTAAGTTGGAGCCGGCCTTGGATCTACCTATTTTG
GCAGCATCTGATATCTACCGGCACCTTGGAATGCAACTGCCGCAGGAGTT
CAAAATGGTTACCTACGATGGACTCCTGGCCCCAGGCTGGTCGCCTTTGT
CGGCAGCAGGGGCTATGGGACTGGGGCCAGAGGAGGCCTCTCAGCTTGAG
CGGAGGAGACGCAGAATGTCGGTGCAATCGGTTGACAGTACGGGCAAACC
GTGTACGAAGCATCACAGCTACACGTTCCAGCCGTTTGAGTCTGTAGCTG
GCCGAACAATGAGAGATATCCCATTCGCACATCCCCGGCAACTCGCAGAT
ATCCTTCCGGTATGATTCGGAGACTCATGTTGTGTGTCGAGGTTACTGAC
ATATTCTTCTAGATCCTTCGCCAGTATGCCTTTCTGGCCAACCTGATCCG
CAGCATTTTCAGCTCTTCATACAAGCCCGATGAGGACAAATCCGCCACGC
CGGCTGATTCTTCAAATATCTCATTTAGCCCACCCAAATTTACTGATGGG
AAGACGAAGAAAGATGTCATCATTCTGAGCAATGCCGACCCGAATGAGAA
GAGACTCGATGCATTGTTGGGAGGCTTCGAGAAATTAGCAACTTCGCCGG
GTGCTAAGGGTAAAGGCCCTGTGGGGGTAGGAAACGAGAATTCGGGCCCC
AATTCTACTGTTGACAACGATGTCAAGGTAGACGTAACGTTGCGGACGCA
ACTGGGACAAGCACCAGTGATCATGCTACTTTTCGCAGTGGATCAACCAG
ACGAAGCGTCGGAATCCGCCAACGCGGAGGCGGCACTGACGAAGGTGTCC
ATTAGTCTGGAAGTTGGACTAAACGGTCGGGTCTCCGTTGTGGACATGAC
CGGTCTGCTAGATGACAACAACACTACCACCACGGACAGCATGGAAGACA
CCCCAGAGAAGAAGGCTCTCGAGTTGCAAAGCAAAATAGCAAATGTGCTG
GAATTGTCACAGGATATTGGGATCTTGGTGGAATGGATTTTACGATGGGC
GCGGCAGCGGAAGGGCCGCTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:2238864..2241235-

>ASPNIDRAFT_35842-T1 ID=ASPNIDRAFT_35842-T1|Name=ASPNIDRAFT_35842-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4638bp|location=Sequence derived from alignment at ACJE01000004.1:2238864..2241235- (Aspergillus niger ATCC 1015)
ATCCTTCGCCAGTATGCCTTTCTGGCCAACCTGATCCGCAGCATTTTCAG
CTCTTCATACAAGCCCGATGAGGACAAATCCGCCACGCCGGCTGATTCTT
CAAATATCTCATTTAGCCCACCCAAATTTACTGATGGGAAGACGAAGAAA
GATGTCATCATTCTGAGCAATGCCGACCCGAATGAGAAGAGACTCGATGC
ATTGTTGGGAGGCTTCGAGAAATTAGCAACTTCGCCGGGTGCTAAGGGTA
AAGGCCCTGTGGGGGTAGGAAACGAGAATTCGGGCCCCAATTCTACTGTT
GACAACGATGTCAAGGTAGACGTAACGTTGCGGACGCAACTGGGACAAGC
ACCAGTGATCATGCTACTTTTCGCAGTGGATCAACCAGACGAAGCGTCGG
AATCCGCCAACGCGGAGGCGGCACTGACGAAGGTGTCCATTAGTCTGGAA
GTTGGACTAAACGGTCGGGTCTCCGTTGTGGACATGACCGGTCTGCTAGA
TGACAACAACACTACCACCACGGACAGCATGGAAGACACCCCAGAGAAGA
AGGCTCTCGAGTTGCAAAGCAAAATAGCAAATGTGCTGGAATTGTCACAG
GATATTGGGATCTTGGTGGAATGGATTTTACGATGGGCGCGGCAGCGGAA
GGGCCGCTGAATGGCGACCCCATCGTCCAAGCCAAACCCAGGAGCGACTC
CGACGCATCTGACCTCGTCGCCTCGTCCGTCTGGTGCTCATATGGCCCGC
CCGATTTCTCACAAATCGCCGTCAACGAGGACGCCTTCAGCTTCCGGTCA
TGGACACAACCAACCCCCCACTTCGATGCACCAATATTCTACCCCTCTCG
CTGTGACTACCGGAGCGGAGGACCCCGTTACGTTCAGTTCCCCGTCCGCT
CTCCTCGCGCTTGGTGGCTACAGCGGAATCAGTCCGTCCCCCGCCGGGCA
CGATGGGCTTGTCGGCGCAGGCATGAACGAGAATGATATCCAGGCATTGG
GCATGCCGGGTCTGAAGCTCGGGGGTGCTCGCGACAGCGAGGAGGAGCGC
AGAAGACATATCGACGATGTGGTCCAGCTTCTACGAGCCCGAGTCTCGGG
GCGGGGCGTTTGCAGAGAGGGTATTGAGCGGCTGAGTGATCTCGAAGGGT
TCGAGTCGATCTGGCAGGAGGACAGTCTCAGCATTGCGGGGAACTTTGTC
GACCTGGAGATCGACTTCCATCGGGGGTATAATGTGGTGAAGGACGTTAG
CTTGAAGTATGCGACGCCCGATGCGCAGGATGGGGAACAGCGCGACGAGG
CTACGGCGGTGCTTAAGCGCGACCTGATCCAGTCGCCGGAGGAAGGAGAC
CGGGGTGCTTGGAAGTCGTTGCGGGGGTTCCATGAGAATCTACAGTGGCT
TGCCAAACATGATCGGCTTAGTCAGGAGGTCAATTGTTTCGAGGCCATCG
AAGGTCTTTACGAGAGCTTGAAGCGCGTGTGGGAGGCGGAGTGGAACCAT
CGCAAGTTCGCGGGGGTGTACGACCATCTTTGCAGTGGCTGGGTTGGCCA
GCCGTGTATGCACAAGGGGAGTCGCATTGGTCTCAGCTTGGATTACTGGG
TGCAGCAAGCACGGGTTCTGGATGCGAAGGAGAAGCAGAAGACGTCGTCT
GATGCGATGGTGGTTGATGCACCGAATGGACAACCGTCGGATGATGATTC
GAGCAGCTTGGAAGGGAAATGGAGCATTGTGGTGGAGTGCGAAGAGGGTT
ACCCATCCCTCCGTGTGTCGAAGGACTGGGTTGGATCCGAAGTGTTAACT
GGGGTCAATAACAATGACAATGGGCCGTCGTCGAGTGAGGCGCATGGGTC
TGAAGCTGCAGTTGTCAACTGGGTTGATCCTCCGGCGACGTTGACCAACA
ACCAAGGTCACCCGGACGCCATGGCACTTGACTCGAATATGCTGGGTTCT
TCTGCTCCTAATCGTCGCTTCGTTGCTAAGTTGGAGCCGGCCTTGGATCT
ACCTATTTTGGCAGCATCTGATATCTACCGGCACCTTGGAATGCAACTGC
CGCAGGAGTTCAAAATGGTTACCTACGATGGACTCCTGGCCCCAGGCTGG
TCGCCTTTGTCGGCAGCAGGGGCTATGGGACTGGGGCCAGAGGAGGCCTC
TCAGCTTGAGCGGAGGAGACGCAGAATGTCGGTGCAATCGGTTGACAGTA
CGGGCAAACCGTGTACGAAGCATCACAGCTACACGTTCCAGCCGTTTGAG
TCTGTAGCTGGCCGAACAATGAGAGATATCCCATTCGCACATCCCCGGCA
ACTCGCAGATATCCTTCCGATCCTTCGCCAGTATGCCTTTCTGGCCAACC
TGATCCGCAGCATTTTCAGCTCTTCATACAAGCCCGATGAGGACAAATCC
GCCACGCCGGCTGATTCTTCAAATATCTCATTTAGCCCACCCAAATTTAC
TGATGGGAAGACGAAGAAAGATGTCATCATTCTGAGCAATGCCGACCCGA
ATGAGAAGAGACTCGATGCATTGTTGGGAGGCTTCGAGAAATTAGCAACT
TCGCCGGGTGCTAAGGGTAAAGGCCCTGTGGGGGTAGGAAACGAGAATTC
GGGCCCCAATTCTACTGTTGACAACGATGTCAAGGTAGACGTAACGTTGC
GGACGCAACTGGGACAAGCACCAGTGATCATGCTACTTTTCGCAGTGGAT
CAACCAGACGAAGCGTCGGAATCCGCCAACGCGGAGGCGGCACTGACGAA
GGTGTCCATTAGTCTGGAAGTTGGACTAAACGGTCGGGTCTCCGTTGTGG
ACATGACCGGTCTGCTAGATGACAACAACACTACCACCACGGACAGCATG
GAAGACACCCCAGAGAAGAAGGCTCTCGAGTTGCAAAGCAAAATAGCAAA
TGTGCTGGAATTGTCACAGGATATTGGGATCTTGGTGGAATGGATTTTAC
GATGGGCGCGGCAGCGGAAGGGCCGCTGAATGGCGACCCCATCGTCCAAG
CCAAACCCAGGAGCGACTCCGACGCATCTGACCTCGTCGCCTCGTCCGTC
TGGTGCTCATATGGCCCGCCCGATTTCTCACAAATCGCCGTCAACGAGGA
CGCCTTCAGCTTCCGGTCATGGACACAACCAACCCCCCACTTCGATGCAC
CAATATTCTACCCCTCTCGCTGTGACTACCGGAGCGGAGGACCCCGTTAC
GTTCAGTTCCCCGTCCGCTCTCCTCGCGCTTGGTGGCTACAGCGGAATCA
GTCCGTCCCCCGCCGGGCACGATGGGCTTGTCGGCGCAGGCATGAACGAG
AATGATATCCAGGCATTGGGCATGCCGGGTCTGAAGCTCGGGGGTGCTCG
CGACAGCGAGGAGGAGCGCAGAAGACATATCGACGATGTGGTCCAGCTTC
TACGAGCCCGAGTCTCGGGGCGGGGCGTTTGCAGAGAGGGTATTGAGCGG
CTGAGTGATCTCGAAGGGTTCGAGTCGATCTGGCAGGAGGACAGTCTCAG
CATTGCGGGGAACTTTGTCGACCTGGAGATCGACTTCCATCGGGGGTATA
ATGTGGTGAAGGACGTTAGCTTGAAGTATGCGACGCCCGATGCGCAGGAT
GGGGAACAGCGCGACGAGGCTACGGCGGTGCTTAAGCGCGACCTGATCCA
GTCGCCGGAGGAAGGAGACCGGGGTGCTTGGAAGTCGTTGCGGGGGTTCC
ATGAGAATCTACAGTGGCTTGCCAAACATGATCGGCTTAGTCAGGAGGTC
AATTGTTTCGAGGCCATCGAAGGTCTTTACGAGAGCTTGAAGCGCGTGTG
GGAGGCGGAGTGGAACCATCGCAAGTTCGCGGGGGTGTACGACCATCTTT
GCAGTGGCTGGGTTGGCCAGCCGTGTATGCACAAGGGGAGTCGCATTGGT
CTCAGCTTGGATTACTGGGTGCAGCAAGCACGGGTTCTGGATGCGAAGGA
GAAGCAGAAGACGTCGTCTGATGCGATGGTGGTTGATGCACCGAATGGAC
AACCGTCGGATGATGATTCGAGCAGCTTGGAAGGGAAATGGAGCATTGTG
GTGGAGTGCGAAGAGGGTTACCCATCCCTCCGTGTGTCGAAGGACTGGGT
TGGATCCGAAGTGTTAACTGGGGTCAATAACAATGACAATGGGCCGTCGT
CGAGTGAGGCGCATGGGTCTGAAGCTGCAGTTGTCAACTGGGTTGATCCT
CCGGCGACGTTGACCAACAACCAAGGTCACCCGGACGCCATGGCACTTGA
CTCGAATATGCTGGGTTCTTCTGCTCCTAATCGTCGCTTCGTTGCTAAGT
TGGAGCCGGCCTTGGATCTACCTATTTTGGCAGCATCTGATATCTACCGG
CACCTTGGAATGCAACTGCCGCAGGAGTTCAAAATGGTTACCTACGATGG
ACTCCTGGCCCCAGGCTGGTCGCCTTTGTCGGCAGCAGGGGCTATGGGAC
TGGGGCCAGAGGAGGCCTCTCAGCTTGAGCGGAGGAGACGCAGAATGTCG
GTGCAATCGGTTGACAGTACGGGCAAACCGTGTACGAAGCATCACAGCTA
CACGTTCCAGCCGTTTGAGTCTGTAGCTGGCCGAACAATGAGAGATATCC
CATTCGCACATCCCCGGCAACTCGCAGATATCCTTCCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35842ASPNIDRAFT_35842Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35842-T1ASPNIDRAFT_35842-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35842-T1.cdsASPNIDRAFT_35842-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35842-T1.exon2ASPNIDRAFT_35842-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_35842-T1.exon1ASPNIDRAFT_35842-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR019680
DBxrefPFAM:PF10744
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2238864..2241235 -
Powered by Drupal