You are here

Home

ASPNIDRAFT_35859-T1, ASPNIDRAFT_35859-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_35859-T1
Unique NameASPNIDRAFT_35859-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2183211..2184311+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_35859-T1 ID=ASPNIDRAFT_35859-T1|Name=ASPNIDRAFT_35859-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1101bp|location=Sequence derived from alignment at ACJE01000004.1:2183211..2184311+ (Aspergillus niger ATCC 1015)
ATGTCACAAAACACTACGACCACAGTACAGGAGCTACGCCTGGGCACCCG
CAATTCCAAACTGGCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGA
CCAGTGCTCACCCCGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGC
GGCGATGCCGACAAAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGA
CGCAGCAAAGAACATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAG
GAGAGCTGGATCTCCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTA
CCAGAAACCTGCACACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGA
TGCGTTGGTGATAAAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTC
AACTGCCCCCCGGTTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCC
CTACTTCGATACAGATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAA
CCTGTAAGAAGACTGCCCCTTTTTGTCACTGAGAGTTGACTCTTTTCTGA
CTTGACATGGCAGCGGAACACGGCTGAAAAAGCTAGATGACCCAGAAGGT
CCATTTTCGGCAATCATCCTGGCCACGGCCGGTATGGTCCGCATCAATCT
GGAAGATCGCATTACGAAACGCTTGCCTCCCTCGGAGTTCCCGTACGCTG
TCGGTCAGGGCGCCCTGGGCATTGAAATCCGCAAGGAGGACGCCCAGACA
AAGACCATGGTTCGAAAAATCGAAGACCTGGTTACCCGTCGGATCTGTCT
GGCAGAGCGGTCACTGCTACGCACTCTTCAGGGCGGCTGCTCGTCTCCAG
TCGCAGTACATTGCACTGTTGAGCAGGCACCAACAGCTTCCTCGCCAGCT
CAATTGCGACTAGATGGTACTATAATTCATCCCCACGGGACAACTTTGCT
ATCTGAACGGACGACAGCGGAAGTGGGAACGGACGAGGATGCCGAGGCGT
TGGGTGCTACGGTCGCTCAGCAATTGTTGAAGAATGGCGGACAAGCATTG
CTGGAAGAGATTCGTCTGTTACAAGAGACCATTGCGACAGATGCAAAATA
G
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:2183211..2184311+

>ASPNIDRAFT_35859-T1 ID=ASPNIDRAFT_35859-T1|Name=ASPNIDRAFT_35859-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2082bp|location=Sequence derived from alignment at ACJE01000004.1:2183211..2184311+ (Aspergillus niger ATCC 1015)
ATGTCACAAAACACTACGACCACAGTACAGGAGCTACGCCTGGGCACCCG
CAATTCCAAACTGGCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGA
CCAGTGCTCACCCCGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGC
GGCGATGCCGACAAAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGA
CGCAGCAAAGAACATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAG
GAGAGCTGGATCTCCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTA
CCAGAAACCTGCACACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGA
TGCGTTGGTGATAAAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTC
AACTGCCCCCCGGTTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCC
CTACTTCGATACAGATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAA
CCTCGGAACACGGCTGAAAAAGCTAGATGACCCAGAAGGTCCATTTTCGG
CAATCATCCTGGCCACGGCCGGTATGGTCCGCATCAATCTGGAAGATCGC
ATTACGAAACGCTTGCCTCCCTCGGAGTTCCCGTACGCTGTCGGTCAGGG
CGCCCTGGGCATTGAAATCCGCAAGGAGGACGCCCAGACAAAGACCATGG
TTCGAAAAATCGAAGACCTGGTTACCCGTCGGATCTGTCTGGCAGAGCGG
TCACTGCTACGCACTCTTCAGGGCGGCTGCTCGTCTCCAGTCGCAGTACA
TTGCACTGTTGAGCAGGCACCAACAGCTTCCTCGCCAGCTCAATTGCGAC
TAGATGGTACTATAATTCATCCCCACGGGACAACTTTGCTATCTGAACGG
ACGACAGCGGAAGTGGGAACGGACGAGGATGCCGAGGCGTTGGGTGCTAC
GGTCGCTCAGCAATTGTTGAAGAATGGCGGACAAGCATTGCTGGAAGAGA
TTCGTCTGTTACAAGAGACCATTGCGACAGATGCAAAATAGATGTCACAA
AACACTACGACCACAGTACAGGAGCTACGCCTGGGCACCCGCAATTCCAA
ACTGGCACTAGTACAAGCGGAGCATGTTTCCAAGGAGCTGACCAGTGCTC
ACCCCGGAGTCCAGTTTCCCTGGCAAACGGTGGTGGTGCGCGGCGATGCC
GACAAAAGTAGCCCTTTCCTGAAATTTGCAGGGCCATCCGACGCAGCAAA
GAACATCTGGACCGAAGAGATGGAAACCAAGCTGTGCGCAGGAGAGCTGG
ATCTCCTCGTGCATTGCCTCAAAGATATGCCGACGCGTCTACCAGAAACC
TGCACACTAGGGGCCATTGTTTATCGGGAAGATCCCACTGATGCGTTGGT
GATAAAGGAGGGGCTGCGGTCGCAGTATACGGATCTGAGTCAACTGCCCC
CCGGTTCTGTGGTGGGCACTAGTTCCACTAGACGGAAAGCCCTACTTCGA
TACAGATACCCGCATTTGAAAGTGGAGGAATGCCGCGGGAACCTCGGAAC
ACGGCTGAAAAAGCTAGATGACCCAGAAGGTCCATTTTCGGCAATCATCC
TGGCCACGGCCGGTATGGTCCGCATCAATCTGGAAGATCGCATTACGAAA
CGCTTGCCTCCCTCGGAGTTCCCGTACGCTGTCGGTCAGGGCGCCCTGGG
CATTGAAATCCGCAAGGAGGACGCCCAGACAAAGACCATGGTTCGAAAAA
TCGAAGACCTGGTTACCCGTCGGATCTGTCTGGCAGAGCGGTCACTGCTA
CGCACTCTTCAGGGCGGCTGCTCGTCTCCAGTCGCAGTACATTGCACTGT
TGAGCAGGCACCAACAGCTTCCTCGCCAGCTCAATTGCGACTAGATGGTA
CTATAATTCATCCCCACGGGACAACTTTGCTATCTGAACGGACGACAGCG
GAAGTGGGAACGGACGAGGATGCCGAGGCGTTGGGTGCTACGGTCGCTCA
GCAATTGTTGAAGAATGGCGGACAAGCATTGCTGGAAGAGATTCGTCTGT
TACAAGAGACCATTGCGACAGATGCAAAATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0018160peptidyl-pyrromethane cofactor linkage
GO:0033014tetrapyrrole biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004418hydroxymethylbilane synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35859ASPNIDRAFT_35859Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35859-T1.exon1ASPNIDRAFT_35859-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_35859-T1.exon2ASPNIDRAFT_35859-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35859-T1.cdsASPNIDRAFT_35859-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_35859-T1ASPNIDRAFT_35859-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR022419
DBxrefInterPro:IPR022418
DBxrefInterPro:IPR036803
DBxrefInterPro:IPR022417
DBxrefInterPro:IPR000860
DBxrefPFAM:PF03900
DBxrefPFAM:PF01379
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2183211..2184311 +
Powered by Drupal