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ASPNIDRAFT_36183-T1, ASPNIDRAFT_36183-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_36183-T1
Unique NameASPNIDRAFT_36183-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1166939..1167692+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_36183-T1 ID=ASPNIDRAFT_36183-T1|Name=ASPNIDRAFT_36183-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=754bp|location=Sequence derived from alignment at ACJE01000004.1:1166939..1167692+ (Aspergillus niger ATCC 1015)
ATGTCTGACTACGGAGACCACGACGCTGAGGAAACGTAAGAGACCGGTAC
CCCATGAGAGCTTGAGCTTGCGCAGGTCAATGCTGCGCGTCTGCGTTACA
TATCGATGGCCGTCATTTTTGCTAGGTGGAAATTCCGATGTTCTGACTAG
GATTGTCTTATAGTTACGACTACGAGCCGGAGCAGGAGTACGATGACAAC
GAGCCCGAGGACTTCTTAAACCCCGAGGATGTCGACGTCGCAGAAGGAGG
AGCCGATGAATATGGCGAAGGCTCATACGCGCCTGCTGTCAACGGAAACC
ACATTGTCGCTTCAGGCGACCCGAATGCGGGGTATGCGGGCAAGGTCATG
GAACAGACACGGGAGAAGAAGGTCCCGAACGACCAGCGCCAGACAACTCC
ATACATGACCAAGTACGAGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGC
AGATCAGGTTCGTCTCGGCAATCGATGCAGCATCAAGCATGGGCTGAGGA
GCGCAATCGGATGCTGACCATGTTTTTAGTATGAACGCCCCGGTGCTCGT
CGATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGA
ACCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGG
TAAGCGGACCTTCTCCATGTGTGTTTAACGATTTGACGTATTCGATCTAA
TCACTATTTCTGTGGTACAGGTACGAGGACTGGACTTGCGAAGAATTACT
CTAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:1166939..1167692+

>ASPNIDRAFT_36183-T1 ID=ASPNIDRAFT_36183-T1|Name=ASPNIDRAFT_36183-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1932bp|location=Sequence derived from alignment at ACJE01000004.1:1166939..1167692+ (Aspergillus niger ATCC 1015)
ATGTCTGACTACGGAGACCACGACGCTGAGGAAACTTACGACTACGAGCC
GGAGCAGGAGTACGATGACAACGAGCCCGAGGACTTCTTAAACCCCGAGG
ATGTCGACGTCGCAGAAGGAGGAGCCGATGAATATGGCGAAGGCTCATAC
GCGCCTGCTGTCAACGGAAACCACATTGTCGCTTCAGGCGACCCGAATGC
GGGGTATGCGGGCAAGGTCATGGAACAGACACGGGAGAAGAAGGTCCCGA
ACGACCAGCGCCAGACAACTCCATACATGACCAAGTACGAGCGCGCGCGT
GTCCTGGGTACTCGGGCGCTGCAGATCAGTATGAACGCCCCGGTGCTCGT
CGATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGA
ACCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGG
TACGAGGACTGGACTTGCGAAGAATTACTCTAGATGTCTGACTACGGAGA
CCACGACGCTGAGGAAACTTACGACTACGAGCCGGAGCAGGAGTACGATG
ACAACGAGCCCGAGGACTTCTTAAACCCCGAGGATGTCGACGTCGCAGAA
GGAGGAGCCGATGAATATGGCGAAGGCTCATACGCGCCTGCTGTCAACGG
AAACCACATTGTCGCTTCAGGCGACCCGAATGCGGGGTATGCGGGCAAGG
TCATGGAACAGACACGGGAGAAGAAGGTCCCGAACGACCAGCGCCAGACA
ACTCCATACATGACCAAGTACGAGCGCGCGCGTGTCCTGGGTACTCGGGC
GCTGCAGATCAGTATGAACGCCCCGGTGCTCGTCGATCTTGAGGGCGAGA
CGGATCCTCTACAGATCGCCATCAAGGAGTTGAACCAGAAGAAGATCCCA
CTGATTGTGCGGAGATATCTTCCCGACGGATGGTACGAGGACTGGACTTG
CGAAGAATTACTCTAGATGTCTGACTACGGAGACCACGACGCTGAGGAAA
CTTACGACTACGAGCCGGAGCAGGAGTACGATGACAACGAGCCCGAGGAC
TTCTTAAACCCCGAGGATGTCGACGTCGCAGAAGGAGGAGCCGATGAATA
TGGCGAAGGCTCATACGCGCCTGCTGTCAACGGAAACCACATTGTCGCTT
CAGGCGACCCGAATGCGGGGTATGCGGGCAAGGTCATGGAACAGACACGG
GAGAAGAAGGTCCCGAACGACCAGCGCCAGACAACTCCATACATGACCAA
GTACGAGCGCGCGCGTGTCCTGGGTACTCGGGCGCTGCAGATCAGTATGA
ACGCCCCGGTGCTCGTCGATCTTGAGGGCGAGACGGATCCTCTACAGATC
GCCATCAAGGAGTTGAACCAGAAGAAGATCCCACTGATTGTGCGGAGATA
TCTTCCCGACGGATGGTACGAGGACTGGACTTGCGAAGAATTACTCTAGA
TGTCTGACTACGGAGACCACGACGCTGAGGAAACTTACGACTACGAGCCG
GAGCAGGAGTACGATGACAACGAGCCCGAGGACTTCTTAAACCCCGAGGA
TGTCGACGTCGCAGAAGGAGGAGCCGATGAATATGGCGAAGGCTCATACG
CGCCTGCTGTCAACGGAAACCACATTGTCGCTTCAGGCGACCCGAATGCG
GGGTATGCGGGCAAGGTCATGGAACAGACACGGGAGAAGAAGGTCCCGAA
CGACCAGCGCCAGACAACTCCATACATGACCAAGTACGAGCGCGCGCGTG
TCCTGGGTACTCGGGCGCTGCAGATCAGTATGAACGCCCCGGTGCTCGTC
GATCTTGAGGGCGAGACGGATCCTCTACAGATCGCCATCAAGGAGTTGAA
CCAGAAGAAGATCCCACTGATTGTGCGGAGATATCTTCCCGACGGATGGT
ACGAGGACTGGACTTGCGAAGAATTACTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPO26ASPNIDRAFT_36183Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36183-T1.exon1ASPNIDRAFT_36183-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36183-T1.exon2ASPNIDRAFT_36183-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36183-T1.exon3ASPNIDRAFT_36183-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36183-T1.exon4ASPNIDRAFT_36183-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36183-T1.cdsASPNIDRAFT_36183-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36183-T1ASPNIDRAFT_36183-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265552
DBxrefInterPro:IPR036161
DBxrefInterPro:IPR006111
DBxrefInterPro:IPR020708
DBxrefInterPro:IPR012293
DBxrefInterPro:IPR006110
DBxrefPFAM:PF01192
Product and III
Product II
Productsubunit common to RNA polymerases I
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1166939..1167692 +
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