You are here

Home

ASPNIDRAFT_36888-T1, ASPNIDRAFT_36888-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_36888-T1
Unique NameASPNIDRAFT_36888-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1152058..1153386+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_36888-T1 ID=ASPNIDRAFT_36888-T1|Name=ASPNIDRAFT_36888-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1329bp|location=Sequence derived from alignment at ACJE01000010.1:1152058..1153386+ (Aspergillus niger ATCC 1015)
ATGGGCTCCATTGACATCTCTGCAGCCAAGCCGGACTGCAACCTATTCTC
CGAGCGTGGTCAACACGCCGTGGAACTTGGTGCCAGCCGTATAACATGGG
ACATCATCAGCGACATGTGGCATCCTCAGAAGAACCCGTCTGGATATCTT
TCCGTGGGCATGGCAGAGAACACGCTGCTGCATGACACGCTGCTGGAGTA
TATCAATGGCAACACGCATCTTTCTGCGGAACACCTTACCTACAATAACG
GGAGTATGGGTTCAAACGCCCTTCGGAAGGCTGTCTCACACTTCGTGAAC
AGACATTTCACTCCCTCCAGACCGGTCAAGCCGGGCCACATCCTCATGAC
CAACGGCTGTTCCTCTGCCATTGAGCACCTGAGTTGGACATTTCTCAACC
CAGGCGAGGCAATCCTCCTCAGCAAGCCATACTACAGTACCTTTATTGCC
GATATCACCTTGCGGCCCGGATCGGTGGTAGTTCCTGTGGAAATGGGTGG
CATGGATCCCTTAAGTCCGGAAGCAGTCGAAAACTACGAGAGAGCAGCGA
GGGAATTTGAAGCACACACCGGAAAGCGAGTTCGTGCCGTTATGCTCTGT
AATCCGCATAACCCTTTGGGTCGGTGTTATCCTCGTGCTACGATTGATAA
GTTGATGAGGCTCTGCCAATCGCGCAGAATGCATTTGATCAGCGATGAGA
TCTATGCTCTGTCAGTCTGGAACAATCGCGTTGACAAAGATATTTCTTTT
GCCCCTTTTGAATCTTTGCTGTCGAGAGACACCACCGGGCTGATTGACCC
TGCCTATGTGCATGTTCTCTGGGGTATGAGCAAGGACTTTGGTGCCAATG
GGCTCCGAGTGGGTGCCGTCATTTCTCAGTCGAACCCCGAGCTGCACATT
GCTCAGAAGTGCCTCTCACTGTACAGTTTCATCTCCGCCATGTCGGACCA
GATTACAGTCTCTATCCTTCAAAATGATGACTTCACAGACAAGTATATTC
AGAAAAACAGAGAAATGCTCTCCCATTCTCATGAGTTCCTTGTGCGCCTT
CTCCAGAAGCACGATATTGAATACCTTCCCGGGTGTCATGCCGGCTTCTT
CGTCTGGGTCAATCTCGGGAAGAAATACAGAGAGACACATCCTGGGGAGG
TCGAAGAGGGACATGCGCTCACTGACACGCTGTTTCAGAGATTACTTGAT
AACAAGGTGTATGTGGCTCACGGTACTGCTTATGGATCGGAGAGCCCAGG
CTGGTTCCGCTTGGTTTTTTCGCATCCTCTTCCTTGGCTGGAGGAGGCAA
TGATTCGCATAGTCCGTGCTTTAAAGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1152058..1153386+

>ASPNIDRAFT_36888-T1 ID=ASPNIDRAFT_36888-T1|Name=ASPNIDRAFT_36888-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1329bp|location=Sequence derived from alignment at ACJE01000010.1:1152058..1153386+ (Aspergillus niger ATCC 1015)
ATGGGCTCCATTGACATCTCTGCAGCCAAGCCGGACTGCAACCTATTCTC
CGAGCGTGGTCAACACGCCGTGGAACTTGGTGCCAGCCGTATAACATGGG
ACATCATCAGCGACATGTGGCATCCTCAGAAGAACCCGTCTGGATATCTT
TCCGTGGGCATGGCAGAGAACACGCTGCTGCATGACACGCTGCTGGAGTA
TATCAATGGCAACACGCATCTTTCTGCGGAACACCTTACCTACAATAACG
GGAGTATGGGTTCAAACGCCCTTCGGAAGGCTGTCTCACACTTCGTGAAC
AGACATTTCACTCCCTCCAGACCGGTCAAGCCGGGCCACATCCTCATGAC
CAACGGCTGTTCCTCTGCCATTGAGCACCTGAGTTGGACATTTCTCAACC
CAGGCGAGGCAATCCTCCTCAGCAAGCCATACTACAGTACCTTTATTGCC
GATATCACCTTGCGGCCCGGATCGGTGGTAGTTCCTGTGGAAATGGGTGG
CATGGATCCCTTAAGTCCGGAAGCAGTCGAAAACTACGAGAGAGCAGCGA
GGGAATTTGAAGCACACACCGGAAAGCGAGTTCGTGCCGTTATGCTCTGT
AATCCGCATAACCCTTTGGGTCGGTGTTATCCTCGTGCTACGATTGATAA
GTTGATGAGGCTCTGCCAATCGCGCAGAATGCATTTGATCAGCGATGAGA
TCTATGCTCTGTCAGTCTGGAACAATCGCGTTGACAAAGATATTTCTTTT
GCCCCTTTTGAATCTTTGCTGTCGAGAGACACCACCGGGCTGATTGACCC
TGCCTATGTGCATGTTCTCTGGGGTATGAGCAAGGACTTTGGTGCCAATG
GGCTCCGAGTGGGTGCCGTCATTTCTCAGTCGAACCCCGAGCTGCACATT
GCTCAGAAGTGCCTCTCACTGTACAGTTTCATCTCCGCCATGTCGGACCA
GATTACAGTCTCTATCCTTCAAAATGATGACTTCACAGACAAGTATATTC
AGAAAAACAGAGAAATGCTCTCCCATTCTCATGAGTTCCTTGTGCGCCTT
CTCCAGAAGCACGATATTGAATACCTTCCCGGGTGTCATGCCGGCTTCTT
CGTCTGGGTCAATCTCGGGAAGAAATACAGAGAGACACATCCTGGGGAGG
TCGAAGAGGGACATGCGCTCACTGACACGCTGTTTCAGAGATTACTTGAT
AACAAGGTGTATGTGGCTCACGGTACTGCTTATGGATCGGAGAGCCCAGG
CTGGTTCCGCTTGGTTTTTTCGCATCCTCTTCCTTGGCTGGAGGAGGCAA
TGATTCGCATAGTCCGTGCTTTAAAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36888ASPNIDRAFT_36888Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36888-T1.exon1ASPNIDRAFT_36888-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36888-T1.cdsASPNIDRAFT_36888-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36888-T1ASPNIDRAFT_36888-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR004838
DBxrefInterPro:IPR015421
DBxrefInterPro:IPR004839
DBxrefInterPro:IPR015422
DBxrefPFAM:PF00155
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1152058..1153386 +
Powered by Drupal