|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000010.1:2696952..2698322+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_37320-T1 ID=ASPNIDRAFT_37320-T1|Name=ASPNIDRAFT_37320-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1371bp|location=Sequence derived from alignment at ACJE01000010.1:2696952..2698322+ (Aspergillus niger ATCC 1015)
ATGGCGGACGGAATTGACAGACGCGCTGATGGTAGGACCTCCAAAAGTCC
CCAACAGTTATTCAGGTCGGTATACTGACTGCGCAAAACTAGACCGCATG
GAGTTCAATACCTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACAT
GCACTTGAAGGAGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAAT
CTCCGTCTGCAGTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGC
GATACCATTGCTCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTC
GATTAGTATCCTCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGGTA
TGTAATATGCGCTCAATTGCATTTTGTTGGTGGTAATCTCACATCTGATA
GCCCTCGTCCTTTCCCCCACTCGTGAACTTGCCACCCAGATTCAGTCCGT
TATTATGGCCCTCGGTGATTACATGAACGTTCAGTGCCATGCTTGTATTG
GAGGCACAAATATTGGAGAGGATATCAGGAAGCTTGACTACGGCCAGCAT
GTCGTTTCGGGCACACCGGGCAGAGTCGCCGATATGATTCGCAGACGTCA
TCTGCGCACCCGTCACATCAAGATGCTGGTTCTTGATGAAGCCGATGAAC
TACTCAACCGTGGATTCCGTGAACAGATTTACGATGTCTACCGCTACCTT
CCTCCTGCCACGCAAGTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGT
GCTTGACATGACCACCAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCA
AGCGTGACGAGTTGACCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTG
GAGAAGGAAGAGTGGAAGTTCGATACCCTTTGCGACCTTTACGATACCTT
GACTATCACCCAGGCGGTCATCTTCTGCAACACCCGTCGCAAGGTCGACT
GGCTTACCGACAAGATGCGCGAAGCCAACTTTACTGTGTCCAGTATGCAC
GGTGAAATGCCCCAGAAGGAGCGTGACAGCATTATGCAGGATTTCCGCCA
GGGTAATTCCCGTGTGCTTATCTCCACTGATGTCTGGGCTCGTGGTATCG
ATGTGCAGCAGGTGTCCCTCGTCATCAACTACGATCTGCCCACTAACCGT
GAAAACTACATCCACCGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGG
TGTTGCCATCAACTTCGTCACCAGCGATGACGTGCGCATCCTCCGCGACA
TTGAACTCTACTACTCCACTCAGATTGATGAGATGCCCATGAATGGTATG
TTGACACCATCTATATCACCAAGACCGGATATAACTAACCCATTTTTCCA
GTTGCCGATCTTCTGTCATAA back to topCoding sequence (CDS) from alignment at ACJE01000010.1:2696952..2698322+ >ASPNIDRAFT_37320-T1 ID=ASPNIDRAFT_37320-T1|Name=ASPNIDRAFT_37320-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4800bp|location=Sequence derived from alignment at ACJE01000010.1:2696952..2698322+ (Aspergillus niger ATCC 1015)
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATCAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATCAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATCAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA
ATGGCGGACGGAATTGACAGACGCGCTGATGACCGCATGGAGTTCAATAC
CTCGAAGGAGGTCACTGTTGCTCCTACCTTCGAGGACATGCACTTGAAGG
AGAGCCTTCTCCGTGGTATCTACGCTTATGGCTACGAATCTCCGTCTGCA
GTCCAGTCCCGTGCCATTGTCCAGATCTGCAAAGGTCGCGATACCATTGC
TCAGGCGCAATCCGGTACTGGTAAGACCGCTACATTCTCGATTAGTATCC
TCCAGGTCATCGATACCGTCGTCCGCGAATCTCAGGCCCTCGTCCTTTCC
CCCACTCGTGAACTTGCCACCCAGATTCAGTCCGTTATTATGGCCCTCGG
TGATTACATGAACGTTCAGTGCCATGCTTGTATTGGAGGCACAAATATTG
GAGAGGATATCAGGAAGCTTGACTACGGCCAGCATGTCGTTTCGGGCACA
CCGGGCAGAGTCGCCGATATGATTCGCAGACGTCATCTGCGCACCCGTCA
CATCAAGATGCTGGTTCTTGATGAAGCCGATGAACTACTCAACCGTGGAT
TCCGTGAACAGATTTACGATGTCTACCGCTACCTTCCTCCTGCCACGCAA
GTCGTTGTCGTTTCCGCTACTCTCCCCTATGATGTGCTTGACATGACCAC
CAAGTTCATGACAGACCCCGTGCGTGTCCTGGTCAAGCGTGACGAGTTGA
CCCTCGAAGGCATCAAGCAGTACTTCATCGCGGTGGAGAAGGAAGAGTGG
AAGTTCGATACCCTTTGCGACCTTTACGATACCTTGACTATCACCCAGGC
GGTCATCTTCTGCAACACCCGTCGCAAGGTCGACTGGCTTACCGACAAGA
TGCGCGAAGCCAACTTTACTGTGTCCAGTATGCACGGTGAAATGCCCCAG
AAGGAGCGTGACAGCATTATGCAGGATTTCCGCCAGGGTAATTCCCGTGT
GCTTATCTCCACTGATGTCTGGGCTCGTGGTATCGATGTGCAGCAGGTGT
CCCTCGTCATCAACTACGATCTGCCCACTAACCGTGAAAACTACATCCAC
CGTATCGGTCGTAGTGGTCGTTTCGGTCGCAAGGGTGTTGCCATCAACTT
CGTCACCAGCGATGACGTGCGCATCCTCCGCGACATTGAACTCTACTACT
CCACTCAGATTGATGAGATGCCCATGAATGTTGCCGATCTTCTGTCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | RNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000010.1 | supercontig | ACJE01000010.1:2696952..2698322 + |
|
