You are here

Home

ASPNIDRAFT_37359-T1, ASPNIDRAFT_37359-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_37359-T1
Unique NameASPNIDRAFT_37359-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2838187..2839269+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_37359-T1 ID=ASPNIDRAFT_37359-T1|Name=ASPNIDRAFT_37359-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1083bp|location=Sequence derived from alignment at ACJE01000010.1:2838187..2839269+ (Aspergillus niger ATCC 1015)
ATGGCGTCAAAGGACCTCTCTCCATCGACCGCTCCCTTCTTCCCCAACGT
CTTCTTTTATAACCAATTCTGTGCCAAACCCAATTGGCCACCCGCAACCA
CAAATCTCTCTGGTCAAGTGGCCATAATCACCGGAGGGAATACTGGCCTG
GGATTTGAGTGTGCATCTCAGCTTCTATCTCTTCAGCTTAGCCACTTGAT
CCTCGCCGTTCGCTCTCTCGAAAAAGGCGAAGCCGCAGCGGCCAAGCTTC
GGGCCGTTAATCCCACGTCAACAATAGATGTCTGGCCACTTGACATGAGC
TCATATGACTCCATACAAAGCTTTGCAAAGCGGGTCGAAAACAACCTTTC
CCGCCTAGATATCGCTATCCTCAATGCTGGGGTGAGACAAGCCCAGTTCA
CCACCAATCCAAGCACCGGCCACGAGGAAACAATTCAAGTCAACTATCTC
TCCACCATGCTTCTCGCTATCCTACTCCTTCCAAGCTTGAGGGACAAATC
TCCGAAAGGAGTGCCAGGGCGATTAACTATCGTCAGCGCGGCACTATCGC
TCCTGCCAAGCTTACCAAACGTGAAGGATGCGCCACTTCTGAAGTTGTTC
GATCGTCCAGATACATATGATGCCAATGGCATTTACTGCATGTCGAAGCT
TCTCGCTCATGCGTTTCTCTACAAGTTGGTTGAATATGTCGGTGCAGATG
ATGTGATTGTGAACCTGGCAGATCCGGCCTTCGTCAAGGGCACTGACCTG
AGCCGGGATTCGCCTGGCCTTGCGAAGGCTGGGCTAGCAGTGTTTGGGGT
TTTGACGGGGAGGACAGTCAAGGTTGGTGCATCGACGTTTATTGATGCTG
CCGTGTTGAAGGGGAAGGAGTCGCATGGGTGCTTCCTTATGAGTTGGAAG
ATTGAACCGTAAGTATTCCCACCTTTCCTTTGAATTTTTCACGTCATGGC
TGACACACGTATGTTCAGGTTTAATGCGTCATTGTATACTCCAGAGGGGA
AACAATCTATTGAACAGCTGTGGCAGGAGACGATGGATGAACTTGATTTT
GCTGGTGTTCGAAGGATACTTGAGACTCTGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:2838187..2839269+

>ASPNIDRAFT_37359-T1 ID=ASPNIDRAFT_37359-T1|Name=ASPNIDRAFT_37359-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2046bp|location=Sequence derived from alignment at ACJE01000010.1:2838187..2839269+ (Aspergillus niger ATCC 1015)
ATGGCGTCAAAGGACCTCTCTCCATCGACCGCTCCCTTCTTCCCCAACGT
CTTCTTTTATAACCAATTCTGTGCCAAACCCAATTGGCCACCCGCAACCA
CAAATCTCTCTGGTCAAGTGGCCATAATCACCGGAGGGAATACTGGCCTG
GGATTTGAGTGTGCATCTCAGCTTCTATCTCTTCAGCTTAGCCACTTGAT
CCTCGCCGTTCGCTCTCTCGAAAAAGGCGAAGCCGCAGCGGCCAAGCTTC
GGGCCGTTAATCCCACGTCAACAATAGATGTCTGGCCACTTGACATGAGC
TCATATGACTCCATACAAAGCTTTGCAAAGCGGGTCGAAAACAACCTTTC
CCGCCTAGATATCGCTATCCTCAATGCTGGGGTGAGACAAGCCCAGTTCA
CCACCAATCCAAGCACCGGCCACGAGGAAACAATTCAAGTCAACTATCTC
TCCACCATGCTTCTCGCTATCCTACTCCTTCCAAGCTTGAGGGACAAATC
TCCGAAAGGAGTGCCAGGGCGATTAACTATCGTCAGCGCGGCACTATCGC
TCCTGCCAAGCTTACCAAACGTGAAGGATGCGCCACTTCTGAAGTTGTTC
GATCGTCCAGATACATATGATGCCAATGGCATTTACTGCATGTCGAAGCT
TCTCGCTCATGCGTTTCTCTACAAGTTGGTTGAATATGTCGGTGCAGATG
ATGTGATTGTGAACCTGGCAGATCCGGCCTTCGTCAAGGGCACTGACCTG
AGCCGGGATTCGCCTGGCCTTGCGAAGGCTGGGCTAGCAGTGTTTGGGGT
TTTGACGGGGAGGACAGTCAAGGTTGGTGCATCGACGTTTATTGATGCTG
CCGTGTTGAAGGGGAAGGAGTCGCATGGGTGCTTCCTTATGAGTTGGAAG
ATTGAACCGTTTAATGCGTCATTGTATACTCCAGAGGGGAAACAATCTAT
TGAACAGCTGTGGCAGGAGACGATGGATGAACTTGATTTTGCTGGTGTTC
GAAGGATACTTGAGACTCTGTAAATGGCGTCAAAGGACCTCTCTCCATCG
ACCGCTCCCTTCTTCCCCAACGTCTTCTTTTATAACCAATTCTGTGCCAA
ACCCAATTGGCCACCCGCAACCACAAATCTCTCTGGTCAAGTGGCCATAA
TCACCGGAGGGAATACTGGCCTGGGATTTGAGTGTGCATCTCAGCTTCTA
TCTCTTCAGCTTAGCCACTTGATCCTCGCCGTTCGCTCTCTCGAAAAAGG
CGAAGCCGCAGCGGCCAAGCTTCGGGCCGTTAATCCCACGTCAACAATAG
ATGTCTGGCCACTTGACATGAGCTCATATGACTCCATACAAAGCTTTGCA
AAGCGGGTCGAAAACAACCTTTCCCGCCTAGATATCGCTATCCTCAATGC
TGGGGTGAGACAAGCCCAGTTCACCACCAATCCAAGCACCGGCCACGAGG
AAACAATTCAAGTCAACTATCTCTCCACCATGCTTCTCGCTATCCTACTC
CTTCCAAGCTTGAGGGACAAATCTCCGAAAGGAGTGCCAGGGCGATTAAC
TATCGTCAGCGCGGCACTATCGCTCCTGCCAAGCTTACCAAACGTGAAGG
ATGCGCCACTTCTGAAGTTGTTCGATCGTCCAGATACATATGATGCCAAT
GGCATTTACTGCATGTCGAAGCTTCTCGCTCATGCGTTTCTCTACAAGTT
GGTTGAATATGTCGGTGCAGATGATGTGATTGTGAACCTGGCAGATCCGG
CCTTCGTCAAGGGCACTGACCTGAGCCGGGATTCGCCTGGCCTTGCGAAG
GCTGGGCTAGCAGTGTTTGGGGTTTTGACGGGGAGGACAGTCAAGGTTGG
TGCATCGACGTTTATTGATGCTGCCGTGTTGAAGGGGAAGGAGTCGCATG
GGTGCTTCCTTATGAGTTGGAAGATTGAACCGTTTAATGCGTCATTGTAT
ACTCCAGAGGGGAAACAATCTATTGAACAGCTGTGGCAGGAGACGATGGA
TGAACTTGATTTTGCTGGTGTTCGAAGGATACTTGAGACTCTGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37359ASPNIDRAFT_37359Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37359-T1.exon1ASPNIDRAFT_37359-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_37359-T1.exon2ASPNIDRAFT_37359-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37359-T1.cdsASPNIDRAFT_37359-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37359-T1ASPNIDRAFT_37359-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000101.8
NoteEggNog:ENOG41
NoteSMCOG1001:short-chain dehydrogenase/reductase SDR
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2838187..2839269 +
Powered by Drupal