You are here

Home

ASPNIDRAFT_37636-T1, ASPNIDRAFT_37636-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_37636-T1
Unique NameASPNIDRAFT_37636-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:3707390..3708645+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_37636-T1 ID=ASPNIDRAFT_37636-T1|Name=ASPNIDRAFT_37636-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1256bp|location=Sequence derived from alignment at ACJE01000010.1:3707390..3708645+ (Aspergillus niger ATCC 1015)
ATGGCCGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGACGACACC
AGAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCT
TTGGTGCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCA
TCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAA
GGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCAC
AGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTC
CTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGA
TATCTACTCATGGTAAATCCCCATTGTCTCCCATTTTGGCTCTACAATTA
TTATAGCAATTGGGGCAGCTAATCTTGAATACTAGGTCCCGTCATACACC
TCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAATT
ATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCC
CCGCCTTCCCTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTC
TTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGC
GTGGTGTACTGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCC
GCTAGCCATTCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGA
CTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAA
CACCCGCAGGGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTT
CTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCGTAAG
TAGACCCTTGTTATCATCATTCATTGGCCATCTAATTTTGACGTTTGGTT
GTTTTGTAGTTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTGC
TGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAGA
GCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGGT
GCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAGA
GGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAGT
TTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGACC
AGATAG
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:3707390..3708645+

>ASPNIDRAFT_37636-T1 ID=ASPNIDRAFT_37636-T1|Name=ASPNIDRAFT_37636-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3357bp|location=Sequence derived from alignment at ACJE01000010.1:3707390..3708645+ (Aspergillus niger ATCC 1015)
ATGGCCGGTAGAGCAGGCATGAAACGTGATGCTAATCATTTGACGACACC
AGAGGCCGATTCAAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCT
TTGGTGCCCCCAAGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCA
TCGGCCTTTAATAAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAA
GGAGCTCCTTCAACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCAC
AGCTCAAGGAGGAAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTC
CTCCAGAAGGAAAAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGA
TATCTACTCATGGTCCCGTCATACACCTCTCCACAAGGTGAAGGTGGTCA
TCGTCGGCCAAGATCCTTATCATAATTATAACCAGGCCCATGGCCTTGCA
TTCTCCGTCCGCCCTCCAACTCCTGCCCCGCCTTCCCTCGTCAACATCTT
TAACGAAATTCATAATGACTATCCTTCTTTCCAAAGACCCGCAAACAAGG
GTGGCCTTCTCATACCCTGGGCTGAGCGTGGTGTACTGATGCTCAACACT
TGCTTGACCGTACGCGCGCATCAAGCCGCTAGCCATTCAAACAAGGGCTG
GGAACTGTTCACGCAGAAAGCCATAGACTTAGTGGCCCGAGTACGGACGC
GCGGTGTTGTTTTCCTTGCATGGGGAACACCCGCAGGGAAGCGCGTGACA
GGCATCAATAGAGCAAAGCATTATGTTCTGCAATCGGTCCACCCAAGCCC
GCTAAGTGCGTCAAGAGGATTCTTCGGAAACCAGCATTTCAAAAAATGTA
ATGAGTGGCTTGCTGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCA
TTGACTTCGAAGAGCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCC
CGCTCTCACTGGTGCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTA
GTTTGGAGGAAGAGGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAG
GCCGTTGACGAGTTTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGC
AGCAGAAGCGACCAGATAGATGGCCGGTAGAGCAGGCATGAAACGTGATG
CTAATCATTTGACGACACCAGAGGCCGATTCAAAGAAACCCAAGGCCAAT
GGAAGCATCACTTCATTCTTTGGTGCCCCCAAGAACAAGTCCAGCGACTC
AAAGGCCACTTCGTCTTCATCGGCCTTTAATAAGCAGAAATGGGTCGACT
CATTGACTTCAGAACAAAAGGAGCTCCTTCAACTTGAGATTGACACTCTT
GATGAGAGCTGGCTGGCACAGCTCAAGGAGGAAGTCGTCAAGCCTGAGTT
CCTGGCCCTGAAGCGCTTCCTCCAGAAGGAAAAGCAATCGGGAGCTAAAA
TCTTTCCTCCCGAAGAAGATATCTACTCATGGTCCCGTCATACACCTCTC
CACAAGGTGAAGGTGGTCATCGTCGGCCAAGATCCTTATCATAATTATAA
CCAGGCCCATGGCCTTGCATTCTCCGTCCGCCCTCCAACTCCTGCCCCGC
CTTCCCTCGTCAACATCTTTAACGAAATTCATAATGACTATCCTTCTTTC
CAAAGACCCGCAAACAAGGGTGGCCTTCTCATACCCTGGGCTGAGCGTGG
TGTACTGATGCTCAACACTTGCTTGACCGTACGCGCGCATCAAGCCGCTA
GCCATTCAAACAAGGGCTGGGAACTGTTCACGCAGAAAGCCATAGACTTA
GTGGCCCGAGTACGGACGCGCGGTGTTGTTTTCCTTGCATGGGGAACACC
CGCAGGGAAGCGCGTGACAGGCATCAATAGAGCAAAGCATTATGTTCTGC
AATCGGTCCACCCAAGCCCGCTAAGTGCGTCAAGAGGATTCTTCGGAAAC
CAGCATTTCAAAAAATGTAATGAGTGGCTTGCTGAACGTTATGGTGCCGA
CGAAGTCATTGACTGGTCATTGACTTCGAAGAGCAAAACCAGCTCTCCTT
TTGCCACCATTCAAAGCCCCGCTCTCACTGGTGCCCCGAATAAGCCTATC
GCTAAAGGGTCAGATGCTAGTTTGGAGGAAGAGGTCTCCAGGACAACAGA
GCCTGCCAAGTCCACCGAGGCCGTTGACGAGTTTGAAGACGATCTCGATG
CGCTGGAAGCCCTAGCAGCAGCAGAAGCGACCAGATAGATGGCCGGTAGA
GCAGGCATGAAACGTGATGCTAATCATTTGACGACACCAGAGGCCGATTC
AAAGAAACCCAAGGCCAATGGAAGCATCACTTCATTCTTTGGTGCCCCCA
AGAACAAGTCCAGCGACTCAAAGGCCACTTCGTCTTCATCGGCCTTTAAT
AAGCAGAAATGGGTCGACTCATTGACTTCAGAACAAAAGGAGCTCCTTCA
ACTTGAGATTGACACTCTTGATGAGAGCTGGCTGGCACAGCTCAAGGAGG
AAGTCGTCAAGCCTGAGTTCCTGGCCCTGAAGCGCTTCCTCCAGAAGGAA
AAGCAATCGGGAGCTAAAATCTTTCCTCCCGAAGAAGATATCTACTCATG
GTCCCGTCATACACCTCTCCACAAGGTGAAGGTGGTCATCGTCGGCCAAG
ATCCTTATCATAATTATAACCAGGCCCATGGCCTTGCATTCTCCGTCCGC
CCTCCAACTCCTGCCCCGCCTTCCCTCGTCAACATCTTTAACGAAATTCA
TAATGACTATCCTTCTTTCCAAAGACCCGCAAACAAGGGTGGCCTTCTCA
TACCCTGGGCTGAGCGTGGTGTACTGATGCTCAACACTTGCTTGACCGTA
CGCGCGCATCAAGCCGCTAGCCATTCAAACAAGGGCTGGGAACTGTTCAC
GCAGAAAGCCATAGACTTAGTGGCCCGAGTACGGACGCGCGGTGTTGTTT
TCCTTGCATGGGGAACACCCGCAGGGAAGCGCGTGACAGGCATCAATAGA
GCAAAGCATTATGTTCTGCAATCGGTCCACCCAAGCCCGCTAAGTGCGTC
AAGAGGATTCTTCGGAAACCAGCATTTCAAAAAATGTAATGAGTGGCTTG
CTGAACGTTATGGTGCCGACGAAGTCATTGACTGGTCATTGACTTCGAAG
AGCAAAACCAGCTCTCCTTTTGCCACCATTCAAAGCCCCGCTCTCACTGG
TGCCCCGAATAAGCCTATCGCTAAAGGGTCAGATGCTAGTTTGGAGGAAG
AGGTCTCCAGGACAACAGAGCCTGCCAAGTCCACCGAGGCCGTTGACGAG
TTTGAAGACGATCTCGATGCGCTGGAAGCCCTAGCAGCAGCAGAAGCGAC
CAGATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006284base-excision repair
Vocabulary: Molecular Function
TermDefinition
GO:0016799hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0004844uracil DNA N-glycosylase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37636ASPNIDRAFT_37636Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37636-T1.exon1ASPNIDRAFT_37636-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_37636-T1.exon2ASPNIDRAFT_37636-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_37636-T1.exon3ASPNIDRAFT_37636-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37636-T1.cdsASPNIDRAFT_37636-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37636-T1ASPNIDRAFT_37636-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264GMT
DBxrefInterPro:IPR018085
DBxrefInterPro:IPR002043
DBxrefInterPro:IPR036895
DBxrefInterPro:IPR005122
DBxrefPFAM:PF03167
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:3707390..3708645 +
Powered by Drupal