You are here

ASPNIDRAFT_37997-T1, ASPNIDRAFT_37997-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_37997-T1
Unique NameASPNIDRAFT_37997-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:2222296..2222922-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_37997-T1 ID=ASPNIDRAFT_37997-T1|Name=ASPNIDRAFT_37997-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=627bp|location=Sequence derived from alignment at ACJE01000021.1:2222296..2222922- (Aspergillus niger ATCC 1015)
ATGCCTCCCTCTTCTTGGCCAGACAGTGCAAAAGCTGCAGTGAGCATCAC ATTTGATAATGTGGGTGAATCAAGAGACGTCGGAGTAGGAGCATGGCCGA AGGAGAAACCCGTGGGACAGCATCCGTCGGTACTGGAGGTGACCCCAATT ATTCTCGACATTCTTGACAAGCACGACGTGAAAGTGACATATTTCATGGA AGCATGGGGTATTCAGACGTACCCAAAGATGCTCAGCGAGGTCCAGAGTC GTGGCCATGAAATTGGATATCACGCATATCAGCACGAGGAGTGGAAAACG CTGTCACCCCTACAAGAAGAAGAAATCATAAACAAGAGCCTCCCAATAGC GCAGGAGCTTGGTGTCTGTTACAAAGGCTTCCGCCCTCCCGGCGGATCGA TGAACGCCGGTACCAAGGATTTGCTCCGTCGTCACGGAATCAAGTATGCT TCAATTCTGGGCCAAGATATCAGCACGGACAAAGATGGCTTCGTGACTCT ACCGTTTCAATGGAGGGCTGTCGATGCGTTCTACATCCTAGATGCATTCG ACTTTCTTAGAGCTGAATACGGAGAGCAAGGATCTATCTTCACTTGCGAA GCTTTCCAGCAGGCGCTCTTTGACTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:2222296..2222922-

>ASPNIDRAFT_37997-T1 ID=ASPNIDRAFT_37997-T1|Name=ASPNIDRAFT_37997-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=627bp|location=Sequence derived from alignment at ACJE01000021.1:2222296..2222922- (Aspergillus niger ATCC 1015)
ATGCCTCCCTCTTCTTGGCCAGACAGTGCAAAAGCTGCAGTGAGCATCAC
ATTTGATAATGTGGGTGAATCAAGAGACGTCGGAGTAGGAGCATGGCCGA
AGGAGAAACCCGTGGGACAGCATCCGTCGGTACTGGAGGTGACCCCAATT
ATTCTCGACATTCTTGACAAGCACGACGTGAAAGTGACATATTTCATGGA
AGCATGGGGTATTCAGACGTACCCAAAGATGCTCAGCGAGGTCCAGAGTC
GTGGCCATGAAATTGGATATCACGCATATCAGCACGAGGAGTGGAAAACG
CTGTCACCCCTACAAGAAGAAGAAATCATAAACAAGAGCCTCCCAATAGC
GCAGGAGCTTGGTGTCTGTTACAAAGGCTTCCGCCCTCCCGGCGGATCGA
TGAACGCCGGTACCAAGGATTTGCTCCGTCGTCACGGAATCAAGTATGCT
TCAATTCTGGGCCAAGATATCAGCACGGACAAAGATGGCTTCGTGACTCT
ACCGTTTCAATGGAGGGCTGTCGATGCGTTCTACATCCTAGATGCATTCG
ACTTTCTTAGAGCTGAATACGGAGAGCAAGGATCTATCTTCACTTGCGAA
GCTTTCCAGCAGGCGCTCTTTGACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37997ASPNIDRAFT_37997Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37997-T1.cdsASPNIDRAFT_37997-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37997-T1.exon1ASPNIDRAFT_37997-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37997-T1ASPNIDRAFT_37997-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteCAZy:CE4
DBxrefInterPro:IPR011330
DBxrefInterPro:IPR002509
DBxrefPFAM:PF01522
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:2222296..2222922 -