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ASPNIDRAFT_38107-T1, ASPNIDRAFT_38107-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_38107-T1
Unique NameASPNIDRAFT_38107-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1865783..1868191-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_38107-T1 ID=ASPNIDRAFT_38107-T1|Name=ASPNIDRAFT_38107-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2409bp|location=Sequence derived from alignment at ACJE01000021.1:1865783..1868191- (Aspergillus niger ATCC 1015)
ATGGCTCCGATCAACGGTTCCCACAATGGCAAACACTCGAAGCCTCAGCG
CGGCGGTAACCTGAAGCGCAAGCGTGTCCAAGAAGATTTGAACTCTCTCA
TCAAGAAGGTCGAGGATCTGGATGTCAAGGAAACCATCGAACAATTCACC
GATCTGCCCTTGTCTGAACCCACCGCGTCCGGACTTGCCTCGTCCCACTA
CAAGACGTTAACCGATATTCAATCCCGTGCGATCAGCCATGCGCTCAAGG
GCCGCGATATTCTCGGTGCCGCAAAGACGGGAAGCGGCAAAACGCTAGCC
TTCCTGATTCCCATCCTGGAAAACCTATACCGCAAACAGTGGTCAGAGCA
CGATGGATTGGGTGCCCTGGTTCTGTCTCCCACCCGCGAACTCGCGATTC
AGATCTTCGAAGTCCTCCGCAAAGTCGGTCGCTATCATACGTTCTCCGCC
GGTCTGGTTATTGGTGGGAAGAGTCTGCGGGAGGAGCAGGAGAGACTGGG
ACGGATGAATATTCTGGTGTGTACGCCTGGTCGCATGCTGCAGCACTTGG
ATCAGACTTCTTTCTTCGAGACGCACAACCTGCAGATGCTCGTGTTGGAC
GAGGCGGATCGCATCTTGGATATGGGTTTCCAGAAGACTGTGGACGCTAT
TATCGGCCATCTTCCCAAGGAGCGCCAGACTCTACTTTTCAGTGCCACAC
AGACGAAGAAGGTGTCGGACTTGGCTCGACTGAGCTTGCAGGATCCCGAA
TATGTGGCTGTTCATGAGGCGGCCTCCTCCGCGACGCCGTCCAAGCTTCA
GCAACATTACGTCGTTACGCCCCTCCCACAGAAACTCGATGTTCTATGGA
GTTTTATTCGGAGCAACCTGAAGTCCAAGACGATCGTTTTCCTGTCATCA
GGAAAGCAGGTGCGCTTTGTCTACGAATCCTTCCGTCACATGCAACCCGG
TGTCCCGTTAATGCACCTTCACGGACGTCAGAAGCAGGGTGGTCGACTCG
ATATCACTACCAAGTTCTCCTCGGCGCAACATGCAGTTCTGTTCGCCACC
GATGTTGCTGCGCGTGGTCTGGACTTTCCGGCCGTCGACTGGGTCATCCA
ACTGGACTGTCCTGAAGATGCCGATACCTATATTCACCGTGTTGGTCGTA
CAGCAAGATACGAGCGCGATGGTCGTGCCGTGCTGTTCCTGGATCCTAGT
GAGGAGAAGGGCATGTTGAAGCGTCTGGAGCAGAAGAAGGTCCAGGTCGA
ACGCATCAACGTCAAGGCCAACAAGCAACAGAGCATTAAAGATCAGCTGC
AAAACATGTGCTTCAAGGATCCCGAATTGAAGTATCTGGGCCAGAAGGCC
TTTATTTCCTACGCTAAGTCGGTCTACGTCCAGAAGGACAAGGAGATCTT
CAACATCAAGGAGCTGAAGCTGGATGAATTTGCGGGCAGCTTGGGACTTC
CGGGTGCACCTCGCATCAAGTTCATTAAGGGTGATGATACCAAGGAGCGG
AAGAACGCGCCCCGTGCTACGGCATATCTGTCCAGCGATGACGAGTCTGA
CGAAGAGGGTGAAAAGAAGAAGACTAAGAAGGATGAGACGCAGGTGCGGA
CGAAGTATGACCGCATGTTTGAGCGTCGGAACCAGGACGTGCTGGCCGAC
CATTACCACAAGCTCATTAACGACGACGGCACGATGGTGGAAACTAATAA
GGCTACTGAGGATGCGGATGAAGACGACGACTTCTTGTCCGTCAAGCGTC
GCTACGAGGCCGGTGACAAGGATCTGGATGTCGGAGGATCTAGCTCGGAG
GATGAGGAGGATGCGGACGGAACGGAGAAGAAGGGAGCCAAGGTGGTCCA
TCTCGATGGCAAGGAGGCCCTGGTCATTGATTCGAAACGCCGCGAGAAGC
TGCTCAAGTCGAAGAAGAAGCTTCTCAAGTTCAAGGGCAAGGGCACGAAG
CTTATCTACGATGATGAGGGCAATGCTCACGAGCTCTACGAAATGGAGGA
CGAAGAACAGTTCAAGGCCAAGGGCGACGCCAAGGAGCAGCAGGCGAAGT
TCCTGGCGGAGGAAGCGGAGCGCACTCGGCAAGCGGATTTGGAGGACAAG
GAAGTCGCCAAGCAGAAGAAGCGCGAGAAGAAGGAGAAGCGCAAGGCCCG
CGAGCGCGAGCTTCTTGCCATGGAGGAAGAAGGAGGGGATTTGGTCCAGA
TCCCGTACAAGGAGGGCGGACTCGCTTCGGACGAAGACGAGGAGGTACTC
CGGCCCAGCAAGAAGGCGCGCGTCTCCTTTGCAGACGAAGCAAGCGAGGA
GGAGCCCAAACCCAAGAAGGCCAAGAAGTCTCAACCAGCTGGCAAAGCAC
CGGAGCAGATCGAGACCCTGGAAGATCTGGAGTCGCTGGCCGCTGGCTTG
CTGGGGTGA
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Coding sequence (CDS) from alignment at ACJE01000021.1:1865783..1868191-

>ASPNIDRAFT_38107-T1 ID=ASPNIDRAFT_38107-T1|Name=ASPNIDRAFT_38107-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2409bp|location=Sequence derived from alignment at ACJE01000021.1:1865783..1868191- (Aspergillus niger ATCC 1015)
ATGGCTCCGATCAACGGTTCCCACAATGGCAAACACTCGAAGCCTCAGCG
CGGCGGTAACCTGAAGCGCAAGCGTGTCCAAGAAGATTTGAACTCTCTCA
TCAAGAAGGTCGAGGATCTGGATGTCAAGGAAACCATCGAACAATTCACC
GATCTGCCCTTGTCTGAACCCACCGCGTCCGGACTTGCCTCGTCCCACTA
CAAGACGTTAACCGATATTCAATCCCGTGCGATCAGCCATGCGCTCAAGG
GCCGCGATATTCTCGGTGCCGCAAAGACGGGAAGCGGCAAAACGCTAGCC
TTCCTGATTCCCATCCTGGAAAACCTATACCGCAAACAGTGGTCAGAGCA
CGATGGATTGGGTGCCCTGGTTCTGTCTCCCACCCGCGAACTCGCGATTC
AGATCTTCGAAGTCCTCCGCAAAGTCGGTCGCTATCATACGTTCTCCGCC
GGTCTGGTTATTGGTGGGAAGAGTCTGCGGGAGGAGCAGGAGAGACTGGG
ACGGATGAATATTCTGGTGTGTACGCCTGGTCGCATGCTGCAGCACTTGG
ATCAGACTTCTTTCTTCGAGACGCACAACCTGCAGATGCTCGTGTTGGAC
GAGGCGGATCGCATCTTGGATATGGGTTTCCAGAAGACTGTGGACGCTAT
TATCGGCCATCTTCCCAAGGAGCGCCAGACTCTACTTTTCAGTGCCACAC
AGACGAAGAAGGTGTCGGACTTGGCTCGACTGAGCTTGCAGGATCCCGAA
TATGTGGCTGTTCATGAGGCGGCCTCCTCCGCGACGCCGTCCAAGCTTCA
GCAACATTACGTCGTTACGCCCCTCCCACAGAAACTCGATGTTCTATGGA
GTTTTATTCGGAGCAACCTGAAGTCCAAGACGATCGTTTTCCTGTCATCA
GGAAAGCAGGTGCGCTTTGTCTACGAATCCTTCCGTCACATGCAACCCGG
TGTCCCGTTAATGCACCTTCACGGACGTCAGAAGCAGGGTGGTCGACTCG
ATATCACTACCAAGTTCTCCTCGGCGCAACATGCAGTTCTGTTCGCCACC
GATGTTGCTGCGCGTGGTCTGGACTTTCCGGCCGTCGACTGGGTCATCCA
ACTGGACTGTCCTGAAGATGCCGATACCTATATTCACCGTGTTGGTCGTA
CAGCAAGATACGAGCGCGATGGTCGTGCCGTGCTGTTCCTGGATCCTAGT
GAGGAGAAGGGCATGTTGAAGCGTCTGGAGCAGAAGAAGGTCCAGGTCGA
ACGCATCAACGTCAAGGCCAACAAGCAACAGAGCATTAAAGATCAGCTGC
AAAACATGTGCTTCAAGGATCCCGAATTGAAGTATCTGGGCCAGAAGGCC
TTTATTTCCTACGCTAAGTCGGTCTACGTCCAGAAGGACAAGGAGATCTT
CAACATCAAGGAGCTGAAGCTGGATGAATTTGCGGGCAGCTTGGGACTTC
CGGGTGCACCTCGCATCAAGTTCATTAAGGGTGATGATACCAAGGAGCGG
AAGAACGCGCCCCGTGCTACGGCATATCTGTCCAGCGATGACGAGTCTGA
CGAAGAGGGTGAAAAGAAGAAGACTAAGAAGGATGAGACGCAGGTGCGGA
CGAAGTATGACCGCATGTTTGAGCGTCGGAACCAGGACGTGCTGGCCGAC
CATTACCACAAGCTCATTAACGACGACGGCACGATGGTGGAAACTAATAA
GGCTACTGAGGATGCGGATGAAGACGACGACTTCTTGTCCGTCAAGCGTC
GCTACGAGGCCGGTGACAAGGATCTGGATGTCGGAGGATCTAGCTCGGAG
GATGAGGAGGATGCGGACGGAACGGAGAAGAAGGGAGCCAAGGTGGTCCA
TCTCGATGGCAAGGAGGCCCTGGTCATTGATTCGAAACGCCGCGAGAAGC
TGCTCAAGTCGAAGAAGAAGCTTCTCAAGTTCAAGGGCAAGGGCACGAAG
CTTATCTACGATGATGAGGGCAATGCTCACGAGCTCTACGAAATGGAGGA
CGAAGAACAGTTCAAGGCCAAGGGCGACGCCAAGGAGCAGCAGGCGAAGT
TCCTGGCGGAGGAAGCGGAGCGCACTCGGCAAGCGGATTTGGAGGACAAG
GAAGTCGCCAAGCAGAAGAAGCGCGAGAAGAAGGAGAAGCGCAAGGCCCG
CGAGCGCGAGCTTCTTGCCATGGAGGAAGAAGGAGGGGATTTGGTCCAGA
TCCCGTACAAGGAGGGCGGACTCGCTTCGGACGAAGACGAGGAGGTACTC
CGGCCCAGCAAGAAGGCGCGCGTCTCCTTTGCAGACGAAGCAAGCGAGGA
GGAGCCCAAACCCAAGAAGGCCAAGAAGTCTCAACCAGCTGGCAAAGCAC
CGGAGCAGATCGAGACCCTGGAAGATCTGGAGTCGCTGGCCGCTGGCTTG
CTGGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP4ASPNIDRAFT_38107Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38107-T1.cdsASPNIDRAFT_38107-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38107-T1.exon1ASPNIDRAFT_38107-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38107-T1ASPNIDRAFT_38107-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260YMF
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR025313
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF13959
DBxrefPFAM:PF00270
ProductATP-dependent RNA helicase dbp4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1865783..1868191 -
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