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ASPNIDRAFT_38226-T1, ASPNIDRAFT_38226-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_38226-T1
Unique NameASPNIDRAFT_38226-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1463412..1464512-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_38226-T1 ID=ASPNIDRAFT_38226-T1|Name=ASPNIDRAFT_38226-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1101bp|location=Sequence derived from alignment at ACJE01000021.1:1463412..1464512- (Aspergillus niger ATCC 1015)
ATGGATCACACAGGCCCGGATGAAGATGGGCTCCCAACAAACACGAACCA
CTCGCGCATGCACAATCGTAATCGCTCCAGCGTCGATGGAACCAAATACA
AGGATGGACAATGGTCGCCAGATAATGAGAGAATCGTTCTGGGACCATAC
GATTATATGCTACAGCACCCCGGCAAAGACATACGGCGGCAGCTTATCAA
CGCTTTCAACGTATGGTTGAAGGTACCCCCGGAGAGCCTCTCAATCATCA
CAAAGGTGGTGGCCATGCTTCATACTGCATCGTTACTGTAAGCTGTTTTC
ATCGTGCCTCGGTTTAGTCTGGACACCTACCTGACCTATGGCGTATGAGC
CAGGATCGATGATGTCGAGGATAACTCTATTTTGCGACGCGGTATTCCCG
TAGCTCATAACATATACGGCACCGCGCAAACCATCAACTCTGCGAACTAT
GTATATTTCCTTGCTCTGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGC
GATTGACATCTACGTCCAAGAGTTATTGAACCTACACCGCGGTCAAGGAA
TGGATCTCTTCTGGCGAGATACTCTGACTTGCCCCAGCGAGGACGAGTAT
TTGGAAATGGTCGGTAACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAA
GTTGATGCAGGCTGAAAGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCA
ACGTCATGGGGCTGATTTTCCAAATCTGCGACGACTACCTCAACCTGTCC
AACACTACGTACACCAAGAACAAAGGTCTTTGTGAAGATCTCACGGAGGG
AAAGTTCTCCTTTCCCATCATTCATAGTATCCGATCCAACCCCGGAAACC
ACCAGCTCCTGAGTATTCTCAAGCAAAAGACGAAAGATGACGAAGTCAAA
CTGTATGCAGTCAGTTACATGGAGAGCACTGGCAGTTTTGCGCACACGCG
GGACGTGGTCCGAGAATTGCGAGCCAAAGCACTGACCCTAATTCAAGCGA
TCGATGGTGACCAAGCAGATGGACGCGAAGACGGCGCCATGGTTCGGGCG
ATCCTCAACAAGATCACCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTA
G
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Coding sequence (CDS) from alignment at ACJE01000021.1:1463412..1464512-

>ASPNIDRAFT_38226-T1 ID=ASPNIDRAFT_38226-T1|Name=ASPNIDRAFT_38226-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2070bp|location=Sequence derived from alignment at ACJE01000021.1:1463412..1464512- (Aspergillus niger ATCC 1015)
GATCGATGATGTCGAGGATAACTCTATTTTGCGACGCGGTATTCCCGTAG
CTCATAACATATACGGCACCGCGCAAACCATCAACTCTGCGAACTATGTA
TATTTCCTTGCTCTGCAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGAT
TGACATCTACGTCCAAGAGTTATTGAACCTACACCGCGGTCAAGGAATGG
ATCTCTTCTGGCGAGATACTCTGACTTGCCCCAGCGAGGACGAGTATTTG
GAAATGGTCGGTAACAAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTT
GATGCAGGCTGAAAGTAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACG
TCATGGGGCTGATTTTCCAAATCTGCGACGACTACCTCAACCTGTCCAAC
ACTACGTACACCAAGAACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAA
GTTCTCCTTTCCCATCATTCATAGTATCCGATCCAACCCCGGAAACCACC
AGCTCCTGAGTATTCTCAAGCAAAAGACGAAAGATGACGAAGTCAAACTG
TATGCAGTCAGTTACATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGA
CGTGGTCCGAGAATTGCGAGCCAAAGCACTGACCCTAATTCAAGCGATCG
ATGGTGACCAAGCAGATGGACGCGAAGACGGCGCCATGGTTCGGGCGATC
CTCAACAAGATCACCGAGTCGACACTGGGGGAGTGTGGTCCCCAGTAGAT
GGATCACACAGGCCCGGATGAAGATGGGCTCCCAACAAACACGAACCACT
CGCGCATGCACAATCGTAATCGCTCCAGCGTCGATGGAACCAAATACAAG
GATGGACAATGGTCGCCAGATAATGAGAGAATCGTTCTGGGACCATACGA
TTATATGCTACAGCACCCCGGCAAAGACATACGGCGGCAGCTTATCAACG
CTTTCAACGTATGGTTGAAGGTACCCCCGGAGAGCCTCTCAATCATCACA
AAGGTGGTGGCCATGCTTCATACTGCATCGTTACTGATCGATGATGTCGA
GGATAACTCTATTTTGCGACGCGGTATTCCCGTAGCTCATAACATATACG
GCACCGCGCAAACCATCAACTCTGCGAACTATGTATATTTCCTTGCTCTG
CAAGAGGTGCAAAAGTTGAACAACCCCGCTGCGATTGACATCTACGTCCA
AGAGTTATTGAACCTACACCGCGGTCAAGGAATGGATCTCTTCTGGCGAG
ATACTCTGACTTGCCCCAGCGAGGACGAGTATTTGGAAATGGTCGGTAAC
AAAACTGGGGGTTTGTTCCGACTTGCAGTGAAGTTGATGCAGGCTGAAAG
TAGCTCCGGAAAGGACTGCGTGAGCCTCGTCAACGTCATGGGGCTGATTT
TCCAAATCTGCGACGACTACCTCAACCTGTCCAACACTACGTACACCAAG
AACAAAGGTCTTTGTGAAGATCTCACGGAGGGAAAGTTCTCCTTTCCCAT
CATTCATAGTATCCGATCCAACCCCGGAAACCACCAGCTCCTGAGTATTC
TCAAGCAAAAGACGAAAGATGACGAAGTCAAACTGTATGCAGTCAGTTAC
ATGGAGAGCACTGGCAGTTTTGCGCACACGCGGGACGTGGTCCGAGAATT
GCGAGCCAAAGCACTGACCCTAATTCAAGCGATCGATGGTGACCAAGCAG
ATGGACGCGAAGACGGCGCCATGGTTCGGGCGATCCTCAACAAGATCACC
GAGTCGACACTGGGGGAGTGTGGTCCCCAGTAGATGGATCACACAGGCCC
GGATGAAGATGGGCTCCCAACAAACACGAACCACTCGCGCATGCACAATC
GTAATCGCTCCAGCGTCGATGGAACCAAATACAAGGATGGACAATGGTCG
CCAGATAATGAGAGAATCGTTCTGGGACCATACGATTATATGCTACAGCA
CCCCGGCAAAGACATACGGCGGCAGCTTATCAACGCTTTCAACGTATGGT
TGAAGGTACCCCCGGAGAGCCTCTCAATCATCACAAAGGTGGTGGCCATG
CTTCATACTGCATCGTTACT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AL3ASPNIDRAFT_38226Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38226-T1ASPNIDRAFT_38226-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38226-T1.cdsASPNIDRAFT_38226-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38226-T1.exon2ASPNIDRAFT_38226-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_38226-T1.exon1ASPNIDRAFT_38226-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000211.6
NoteSMCOG1182:Polyprenyl synthetase
DBxrefInterPro:IPR033749
DBxrefInterPro:IPR000092
DBxrefInterPro:IPR008949
DBxrefPFAM:PF00348
Productfarnesyltranstransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1463412..1464512 -
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