You are here

Home

ASPNIDRAFT_38241-T1, ASPNIDRAFT_38241-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_38241-T1
Unique NameASPNIDRAFT_38241-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1411957..1413447+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_38241-T1 ID=ASPNIDRAFT_38241-T1|Name=ASPNIDRAFT_38241-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1491bp|location=Sequence derived from alignment at ACJE01000021.1:1411957..1413447+ (Aspergillus niger ATCC 1015)
ATGGATCGATTGCCCCTCGAACTGCATATACGAATCGGCCGACATCTGCA
CACCCAAGATTTATACCAGCTGGTTCTCGTCTCAAAATCCTATCATTCCA
CTTTCACCCCGGAGCTTTACCGCGAGATCATGATTTCGGGAGAATACCAG
GAGTCTAACACCAATTCCTACTGGCCATCTGTCCCGGTAACGCGCAAGAG
CCGCCCTCCTGGCCGATGTCTCCCTTATGCCCTTAGTGAACACCCAGTCC
TTGCTGGTTTCGTCCGCTCACTGGTGTTGCTCCCACTCGCACACCAGGGT
TCTCCACAACCCAAACCGTCACGAGCTCTTCAGGAAACAGATTGGCTAGA
CTCCTTGCTCCCCCATCCGGTGACCAGACAGACAATCCTGTGTTGGCAAA
AGGCCCTTGATTCTGACGAAAAACTCGATTCTCGCCAGCCCCTGAGAAAT
CCCTGGTTCGCCCTGCTATTGCTTCAGCTCAAGAATCTACGGCGTCTTTC
TGTTTATTTGCCATGCGAGGAACGCGTGTCTGGACTAAACTACACCTCTG
CGACGCCTTATTTTGACAGCGTCATCCATGGGGCAGCAAAACCCGGATCA
GGGATCCTCCCCCGCTTGACCCATCTCACTATCAACGAAGCTCACTTACG
GTGGCATCATAAGCGGTCAGGTATACCCCTGAGTCAGCTGGCACCATTTC
TTCGGATCCCTTCCCTGAGATATATACGTGTTGGGCAGCTCACTGAGAAT
AATAAGCAAGCTCTCCCTCGCGACTTCAGCTGCGGAATAACCCATACTGA
TATCGAACTGTGTGATAAAACCATCACTCAATTGCCACGCCTCCTCTCGG
GGTGTTCAAAGCTCGAATCCTTCACATGGGCGCTCGAGGAGTCAACACAT
CATTTCTATAATGACCCGCACAGTCCTGCTTACCACTGGAATCCCAACCG
CGTGTATGCTCCTCTTTACGAAGCCCGCTCCACGCTGCGGCACCTTACTA
TGATATCTTATGAGTGCAGTGGCGACATGTTCCTCTTTCACGATCTGGAG
TATCCCCAGCCAGCATACTTCGGGCCCCTGTGTGACTTTCCTGTCCTGGA
AACCCTAAACATGCCGATGGTTAATCTAATGCCTTTTCATCCCGGCACAC
ATGTCCCGGTTTCTCCTCTGTGGGAGACTCTCCCAAGCTCGCTCAAGTCC
CTATCCATATACGGGTGTCTTTTGCAGAGTTCGCATATGCTCTGCGACGA
GCTGGAAGACTTGGCAGCACATTGCCAGACACATTTCCCTCTGCTTAATA
TGGTGTACATCGTGTATTCCAATTTTGAGAAGATCAATGGGCAGCAATGT
AGTGCCTGTCGCGGCGAACGTACTAAGTACGATATGGTCAAGCGAGACCC
AGTGATCGATGGGCGGCTTGAAGCATTGAAAGTCAGGTTTGAAATGCTCG
GGGTCATTTTGGCCGTCAATAAATCCATGAACTGGTTCTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:1411957..1413447+

>ASPNIDRAFT_38241-T1 ID=ASPNIDRAFT_38241-T1|Name=ASPNIDRAFT_38241-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1491bp|location=Sequence derived from alignment at ACJE01000021.1:1411957..1413447+ (Aspergillus niger ATCC 1015)
ATGGATCGATTGCCCCTCGAACTGCATATACGAATCGGCCGACATCTGCA
CACCCAAGATTTATACCAGCTGGTTCTCGTCTCAAAATCCTATCATTCCA
CTTTCACCCCGGAGCTTTACCGCGAGATCATGATTTCGGGAGAATACCAG
GAGTCTAACACCAATTCCTACTGGCCATCTGTCCCGGTAACGCGCAAGAG
CCGCCCTCCTGGCCGATGTCTCCCTTATGCCCTTAGTGAACACCCAGTCC
TTGCTGGTTTCGTCCGCTCACTGGTGTTGCTCCCACTCGCACACCAGGGT
TCTCCACAACCCAAACCGTCACGAGCTCTTCAGGAAACAGATTGGCTAGA
CTCCTTGCTCCCCCATCCGGTGACCAGACAGACAATCCTGTGTTGGCAAA
AGGCCCTTGATTCTGACGAAAAACTCGATTCTCGCCAGCCCCTGAGAAAT
CCCTGGTTCGCCCTGCTATTGCTTCAGCTCAAGAATCTACGGCGTCTTTC
TGTTTATTTGCCATGCGAGGAACGCGTGTCTGGACTAAACTACACCTCTG
CGACGCCTTATTTTGACAGCGTCATCCATGGGGCAGCAAAACCCGGATCA
GGGATCCTCCCCCGCTTGACCCATCTCACTATCAACGAAGCTCACTTACG
GTGGCATCATAAGCGGTCAGGTATACCCCTGAGTCAGCTGGCACCATTTC
TTCGGATCCCTTCCCTGAGATATATACGTGTTGGGCAGCTCACTGAGAAT
AATAAGCAAGCTCTCCCTCGCGACTTCAGCTGCGGAATAACCCATACTGA
TATCGAACTGTGTGATAAAACCATCACTCAATTGCCACGCCTCCTCTCGG
GGTGTTCAAAGCTCGAATCCTTCACATGGGCGCTCGAGGAGTCAACACAT
CATTTCTATAATGACCCGCACAGTCCTGCTTACCACTGGAATCCCAACCG
CGTGTATGCTCCTCTTTACGAAGCCCGCTCCACGCTGCGGCACCTTACTA
TGATATCTTATGAGTGCAGTGGCGACATGTTCCTCTTTCACGATCTGGAG
TATCCCCAGCCAGCATACTTCGGGCCCCTGTGTGACTTTCCTGTCCTGGA
AACCCTAAACATGCCGATGGTTAATCTAATGCCTTTTCATCCCGGCACAC
ATGTCCCGGTTTCTCCTCTGTGGGAGACTCTCCCAAGCTCGCTCAAGTCC
CTATCCATATACGGGTGTCTTTTGCAGAGTTCGCATATGCTCTGCGACGA
GCTGGAAGACTTGGCAGCACATTGCCAGACACATTTCCCTCTGCTTAATA
TGGTGTACATCGTGTATTCCAATTTTGAGAAGATCAATGGGCAGCAATGT
AGTGCCTGTCGCGGCGAACGTACTAAGTACGATATGGTCAAGCGAGACCC
AGTGATCGATGGGCGGCTTGAAGCATTGAAAGTCAGGTTTGAAATGCTCG
GGGTCATTTTGGCCGTCAATAAATCCATGAACTGGTTCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38241ASPNIDRAFT_38241Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38241-T1.exon1ASPNIDRAFT_38241-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38241-T1.cdsASPNIDRAFT_38241-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38241-T1ASPNIDRAFT_38241-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1411957..1413447 +
Powered by Drupal