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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:1270569..1271841- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_38286-T1 ID=ASPNIDRAFT_38286-T1|Name=ASPNIDRAFT_38286-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1273bp|location=Sequence derived from alignment at ACJE01000021.1:1270569..1271841- (Aspergillus niger ATCC 1015)
ATGTCCGAAGAGCAAAAGCCCGTCGCCCAGCCCAACGCTGAGGCTGAGAA
GGATGTCCAGAACGTCCTCGCCGAGCTGAAGGGCGAGAACGAAGCCCCCG
CCAACGGTACTGAGAAGAAGGAGGCCGAAGATGCCGAGGAAGCCCGCATT
GTCGAGGCCGCCGCCAAGCTGGGCGAGAAGTCTGAGAAGGCTGAAGAGCA
GAAGGAATCCAAGACACAGGAATCTCGCAACGACAACCGGGGTCGCGAGG
GCCGCTTCAACCGCCGCAACAACGCCAAGTTTGACCCCTCCACGCAGCAG
GTGACGGATGACCCGGTCGAGATTCGCAAGCAGGTTGAGTTCTACTTCTC
TGACTCCAACCTGCCCATGGACAAGTTCCTGTTCTCCAAGGTTGGTGGCA
GCGCCAACCGTTCCGTTCCTCTGGAGCTTCTGCACTCCTTCAAGCGCATG
CGCCGCTTCCAGCCCTTCAGCGCCGTGGTTGAAGCCCTCAAGTCGTCCGA
GACGCTTGAGCTGACCGATAACGATACCTCCGTGCGCCGGAAGACGCCCC
TTCCGGAGTCCGTGTCGCAGACTCACGACCACAACGTGGTCAAGGTGTTC
GAGGACCAGGCCATGAGCCGTAGCATCTACGCCAAGGGTTTCGGCGACGA
GGAGCCGACTACCCAGCTTGACATCGAGGCTTTCTTCGCCCCCTACGGAC
CCGTCAACGCCATCCGTCTGCGTCGTGCCTACGACAAGACCTTCAAGGGC
AGTGTTTTCGTTGAGTTCGAGTCGGAGGAGAAGCAGAAGGCTTTCCTGGC
CCTGGACCCCAAGCCCCAGTGGAAGGGACAGGACCTGCTCATCAAGAGCA
AGAAGGATTACTGCGACGAGAAGGTGCGCGAAATTGAGGCTGGCCGCGTG
AAGCCCAGCGGCTCTCGTGGACGCGGTGGCTTCCAGCGCGGTCGCGGCCG
TGGCCGTGGTGGAAACCGTGGTCGTGACAACCGCGACTGGAGGGAGCGCC
GCGCGGCTGACCAGAAGAACGGCTTCAACGACAAGAAGAGTGAGCCCAAG
GAGGAGCGCACTGAGGTTCAGAAGGATGCTCGGTATGTATTTACCTCTGC
TTCCCCCCTATCACCACCTTCACTACCCCATTTCTCAAAGCAAATGTATA
CTAACAAAACACCCCAGCGGTGTCCCCATTGTTCAGAGCACCGCCGAAAC
CGGCCAGAAGCGTGCCGCCGAAGACGAGGCGAACGGCGACCACCCGGCCA
AGAAGGTGGACGCCAAGGAGTAA back to topCoding sequence (CDS) from alignment at ACJE01000021.1:1270569..1271841- >ASPNIDRAFT_38286-T1 ID=ASPNIDRAFT_38286-T1|Name=ASPNIDRAFT_38286-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2376bp|location=Sequence derived from alignment at ACJE01000021.1:1270569..1271841- (Aspergillus niger ATCC 1015)
CGGTGTCCCCATTGTTCAGAGCACCGCCGAAACCGGCCAGAAGCGTGCCG
CCGAAGACGAGGCGAACGGCGACCACCCGGCCAAGAAGGTGGACGCCAAG
GAGTAAATGTCCGAAGAGCAAAAGCCCGTCGCCCAGCCCAACGCTGAGGC
TGAGAAGGATGTCCAGAACGTCCTCGCCGAGCTGAAGGGCGAGAACGAAG
CCCCCGCCAACGGTACTGAGAAGAAGGAGGCCGAAGATGCCGAGGAAGCC
CGCATTGTCGAGGCCGCCGCCAAGCTGGGCGAGAAGTCTGAGAAGGCTGA
AGAGCAGAAGGAATCCAAGACACAGGAATCTCGCAACGACAACCGGGGTC
GCGAGGGCCGCTTCAACCGCCGCAACAACGCCAAGTTTGACCCCTCCACG
CAGCAGGTGACGGATGACCCGGTCGAGATTCGCAAGCAGGTTGAGTTCTA
CTTCTCTGACTCCAACCTGCCCATGGACAAGTTCCTGTTCTCCAAGGTTG
GTGGCAGCGCCAACCGTTCCGTTCCTCTGGAGCTTCTGCACTCCTTCAAG
CGCATGCGCCGCTTCCAGCCCTTCAGCGCCGTGGTTGAAGCCCTCAAGTC
GTCCGAGACGCTTGAGCTGACCGATAACGATACCTCCGTGCGCCGGAAGA
CGCCCCTTCCGGAGTCCGTGTCGCAGACTCACGACCACAACGTGGTCAAG
GTGTTCGAGGACCAGGCCATGAGCCGTAGCATCTACGCCAAGGGTTTCGG
CGACGAGGAGCCGACTACCCAGCTTGACATCGAGGCTTTCTTCGCCCCCT
ACGGACCCGTCAACGCCATCCGTCTGCGTCGTGCCTACGACAAGACCTTC
AAGGGCAGTGTTTTCGTTGAGTTCGAGTCGGAGGAGAAGCAGAAGGCTTT
CCTGGCCCTGGACCCCAAGCCCCAGTGGAAGGGACAGGACCTGCTCATCA
AGAGCAAGAAGGATTACTGCGACGAGAAGGTGCGCGAAATTGAGGCTGGC
CGCGTGAAGCCCAGCGGCTCTCGTGGACGCGGTGGCTTCCAGCGCGGTCG
CGGCCGTGGCCGTGGTGGAAACCGTGGTCGTGACAACCGCGACTGGAGGG
AGCGCCGCGCGGCTGACCAGAAGAACGGCTTCAACGACAAGAAGAGTGAG
CCCAAGGAGGAGCGCACTGAGGTTCAGAAGGATGCTCGCGGTGTCCCCAT
TGTTCAGAGCACCGCCGAAACCGGCCAGAAGCGTGCCGCCGAAGACGAGG
CGAACGGCGACCACCCGGCCAAGAAGGTGGACGCCAAGGAGTAAATGTCC
GAAGAGCAAAAGCCCGTCGCCCAGCCCAACGCTGAGGCTGAGAAGGATGT
CCAGAACGTCCTCGCCGAGCTGAAGGGCGAGAACGAAGCCCCCGCCAACG
GTACTGAGAAGAAGGAGGCCGAAGATGCCGAGGAAGCCCGCATTGTCGAG
GCCGCCGCCAAGCTGGGCGAGAAGTCTGAGAAGGCTGAAGAGCAGAAGGA
ATCCAAGACACAGGAATCTCGCAACGACAACCGGGGTCGCGAGGGCCGCT
TCAACCGCCGCAACAACGCCAAGTTTGACCCCTCCACGCAGCAGGTGACG
GATGACCCGGTCGAGATTCGCAAGCAGGTTGAGTTCTACTTCTCTGACTC
CAACCTGCCCATGGACAAGTTCCTGTTCTCCAAGGTTGGTGGCAGCGCCA
ACCGTTCCGTTCCTCTGGAGCTTCTGCACTCCTTCAAGCGCATGCGCCGC
TTCCAGCCCTTCAGCGCCGTGGTTGAAGCCCTCAAGTCGTCCGAGACGCT
TGAGCTGACCGATAACGATACCTCCGTGCGCCGGAAGACGCCCCTTCCGG
AGTCCGTGTCGCAGACTCACGACCACAACGTGGTCAAGGTGTTCGAGGAC
CAGGCCATGAGCCGTAGCATCTACGCCAAGGGTTTCGGCGACGAGGAGCC
GACTACCCAGCTTGACATCGAGGCTTTCTTCGCCCCCTACGGACCCGTCA
ACGCCATCCGTCTGCGTCGTGCCTACGACAAGACCTTCAAGGGCAGTGTT
TTCGTTGAGTTCGAGTCGGAGGAGAAGCAGAAGGCTTTCCTGGCCCTGGA
CCCCAAGCCCCAGTGGAAGGGACAGGACCTGCTCATCAAGAGCAAGAAGG
ATTACTGCGACGAGAAGGTGCGCGAAATTGAGGCTGGCCGCGTGAAGCCC
AGCGGCTCTCGTGGACGCGGTGGCTTCCAGCGCGGTCGCGGCCGTGGCCG
TGGTGGAAACCGTGGTCGTGACAACCGCGACTGGAGGGAGCGCCGCGCGG
CTGACCAGAAGAACGGCTTCAACGACAAGAAGAGTGAGCCCAAGGAGGAG
CGCACTGAGGTTCAGAAGGATGCTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:1990904 | ribonucleoprotein complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0003723 | RNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006396 | RNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR036388 |
| DBxref | InterPro:IPR006630 |
| DBxref | InterPro:IPR000504 |
| DBxref | InterPro:IPR002344 |
| DBxref | PFAM:PF00076 |
| DBxref | PFAM:PF05383 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:1270569..1271841 - |
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