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ASPNIDRAFT_38383-T1, ASPNIDRAFT_38383-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_38383-T1
Unique NameASPNIDRAFT_38383-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:944902..945284+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_38383-T1 ID=ASPNIDRAFT_38383-T1|Name=ASPNIDRAFT_38383-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=383bp|location=Sequence derived from alignment at ACJE01000021.1:944902..945284+ (Aspergillus niger ATCC 1015)
ATGTCGCTTCACTCTTATATTAACAGTAAGTTTGGTCTCAAGAGATCCAT
TTCATGTCTGGGATTTAGTCTCATGGTCAGTGCTAACGTATGTGGTTTTA
CCCCGATATAGAGAAAGTATGCATCCTGACGGTTGACGGACGGACACTCC
TGGGGACATTACTCTCGACCGACCAGCTCACGAACCTGGTTCTCCTGGAC
ACGATCGAGCGAATCATCCGGACCCCCGACGACCCGGAACCCAGTTCCCA
GATTGAACATGGGCTGTATCTGATCCGAGGCGACAACGTTGTATTATGCG
GAGAGGTGGACGAAGCCATTGACAACGACATCGACTGGACGAAGGTCAGG
GGAGAAGTGGTCAAAGGTACCAAGAACGCATGA
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Coding sequence (CDS) from alignment at ACJE01000021.1:944902..945284+

>ASPNIDRAFT_38383-T1 ID=ASPNIDRAFT_38383-T1|Name=ASPNIDRAFT_38383-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=594bp|location=Sequence derived from alignment at ACJE01000021.1:944902..945284+ (Aspergillus niger ATCC 1015)
ATGTCGCTTCACTCTTATATTAACAAGAAAGTATGCATCCTGACGGTTGA
CGGACGGACACTCCTGGGGACATTACTCTCGACCGACCAGCTCACGAACC
TGGTTCTCCTGGACACGATCGAGCGAATCATCCGGACCCCCGACGACCCG
GAACCCAGTTCCCAGATTGAACATGGGCTGTATCTGATCCGAGGCGACAA
CGTTGTATTATGCGGAGAGGTGGACGAAGCCATTGACAACGACATCGACT
GGACGAAGGTCAGGGGAGAAGTGGTCAAAGGTACCAAGAACGCATGAATG
TCGCTTCACTCTTATATTAACAAGAAAGTATGCATCCTGACGGTTGACGG
ACGGACACTCCTGGGGACATTACTCTCGACCGACCAGCTCACGAACCTGG
TTCTCCTGGACACGATCGAGCGAATCATCCGGACCCCCGACGACCCGGAA
CCCAGTTCCCAGATTGAACATGGGCTGTATCTGATCCGAGGCGACAACGT
TGTATTATGCGGAGAGGTGGACGAAGCCATTGACAACGACATCGACTGGA
CGAAGGTCAGGGGAGAAGTGGTCAAAGGTACCAAGAACGCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005688U6 snRNP
GO:0046540U4/U6 x U5 tri-snRNP complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38383ASPNIDRAFT_38383Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38383-T1.exon1ASPNIDRAFT_38383-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_38383-T1.exon2ASPNIDRAFT_38383-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38383-T1.cdsASPNIDRAFT_38383-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38383-T1ASPNIDRAFT_38383-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR034103
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:944902..945284 +
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