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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:801016..802141- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_38426-T1 ID=ASPNIDRAFT_38426-T1|Name=ASPNIDRAFT_38426-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1126bp|location=Sequence derived from alignment at ACJE01000021.1:801016..802141- (Aspergillus niger ATCC 1015)
ATGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGGGCAGGGTATGTTT
CCATCGTCGCCTCCCATGTGTTGCCCTTAGCATGGTTGGCTAACCTCTTC
TTTAGACCGTCGTTATCACGGGCGGTTCGGAGGGGATGGGCAAGGCCGTG
GCTTGCCAGCTTGCAGAGAAGGGTGCAAATGTTGTGCTTGTCGCACGCAC
GGAGTCGAAGCTCCAGGATGCCCTCGAGGCTGTCAAGGTAAGTAGAGCCT
CGGTTTTTTTGGAAGAATCTCAGCTAACTCTCAATTCTCTTGAAGGGTAC
GGCGGCTGAAGCCGACCGGCAGAGATTCCACTACATCTGTGCGGATCTGA
CCAATGCTGCGGAGTGTGACCGTGTCATGGCCGAAGTCACCGAATGGAAC
CACGGACAATCTCCCGATATCGTATGGTGCTGCGCAGGATACTGCAGCCC
CGGCTTCTTTGCCGAGACCCCCGTCCAGACATTGAGGGACCAAATGGATA
CGGTGTACTGGACAGCTGCCAACACTGCTCATGCCATCCTGAGACGGTGG
CTAGTACCTATTAGCCCCAGCCAGCAGATGCCACTACCTCCCAGACACCT
TATCTTCACATGCTCTACCCTCGCATTTGTGCCCATTGCTGGTTATGCTC
CTTACTCGCCAGCCAAAGCCGCGATCCGCTCATTGTCTGATACTCTCAGC
CAAGAAATTGAGATGTACAACGGTTCTCGCGCCGACAAGTGCCGCTCGGA
GGCTCCAGCCACGGACGTGAAGATCCATACAGTCTTCCCCATGGGCATTC
TCAGCCCTGGATTCGACAACGAACAGAAGCTCAAGCCGGAGCTTACTAAG
AAGCTGGAGGCTGCTGACAAGCCACAGACTCCGAGGGAGGTTGCAAACAT
TGCGATCAAGGCCCTGGAGAGGGGCGAGTACATGATCACCACGATGTTCG
TTGGCGATGTGATGAAGGGATCAGCGCTCGGAGGCAGCCAACGGAATTCA
TTCATTAAGGATACTTTCACTGGCTGGCTCAGCAACTTGTTGTTCCTGCA
TGTCAGCCCCGATCTCAGGAGGCAGGCCTGGAGCTGGGGTGAGAAGCACG
GCGTCCCATCTCGCCCGAGAGAGTAA back to topCoding sequence (CDS) from alignment at ACJE01000021.1:801016..802141- >ASPNIDRAFT_38426-T1 ID=ASPNIDRAFT_38426-T1|Name=ASPNIDRAFT_38426-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3141bp|location=Sequence derived from alignment at ACJE01000021.1:801016..802141- (Aspergillus niger ATCC 1015)
GGTACGGCGGCTGAAGCCGACCGGCAGAGATTCCACTACATCTGTGCGGA
TCTGACCAATGCTGCGGAGTGTGACCGTGTCATGGCCGAAGTCACCGAAT
GGAACCACGGACAATCTCCCGATATCGTATGGTGCTGCGCAGGATACTGC
AGCCCCGGCTTCTTTGCCGAGACCCCCGTCCAGACATTGAGGGACCAAAT
GGATACGGTGTACTGGACAGCTGCCAACACTGCTCATGCCATCCTGAGAC
GGTGGCTAGTACCTATTAGCCCCAGCCAGCAGATGCCACTACCTCCCAGA
CACCTTATCTTCACATGCTCTACCCTCGCATTTGTGCCCATTGCTGGTTA
TGCTCCTTACTCGCCAGCCAAAGCCGCGATCCGCTCATTGTCTGATACTC
TCAGCCAAGAAATTGAGATGTACAACGGTTCTCGCGCCGACAAGTGCCGC
TCGGAGGCTCCAGCCACGGACGTGAAGATCCATACAGTCTTCCCCATGGG
CATTCTCAGCCCTGGATTCGACAACGAACAGAAGCTCAAGCCGGAGCTTA
CTAAGAAGCTGGAGGCTGCTGACAAGCCACAGACTCCGAGGGAGGTTGCA
AACATTGCGATCAAGGCCCTGGAGAGGGGCGAGTACATGATCACCACGAT
GTTCGTTGGCGATGTGATGAAGGGATCAGCGCTCGGAGGCAGCCAACGGA
ATTCATTCATTAAGGATACTTTCACTGGCTGGCTCAGCAACTTGTTGTTC
CTGCATGTCAGCCCCGATCTCAGGAGGCAGGCCTGGAGCTGGGGTGAGAA
GCACGGCGTCCCATCTCGCCCGAGAGAGTAAACCGTCGTTATCACGGGCG
GTTCGGAGGGGATGGGCAAGGCCGTGGCTTGCCAGCTTGCAGAGAAGGGT
GCAAATGTTGTGCTTGTCGCACGCACGGAGTCGAAGCTCCAGGATGCCCT
CGAGGCTGTCAAGATGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGG
GCAGGGTATGTTTCCATCGTCGCCTCCCATGTGTTGCCCTTAGCATGGGT
ACGGCGGCTGAAGCCGACCGGCAGAGATTCCACTACATCTGTGCGGATCT
GACCAATGCTGCGGAGTGTGACCGTGTCATGGCCGAAGTCACCGAATGGA
ACCACGGACAATCTCCCGATATCGTATGGTGCTGCGCAGGATACTGCAGC
CCCGGCTTCTTTGCCGAGACCCCCGTCCAGACATTGAGGGACCAAATGGA
TACGGTGTACTGGACAGCTGCCAACACTGCTCATGCCATCCTGAGACGGT
GGCTAGTACCTATTAGCCCCAGCCAGCAGATGCCACTACCTCCCAGACAC
CTTATCTTCACATGCTCTACCCTCGCATTTGTGCCCATTGCTGGTTATGC
TCCTTACTCGCCAGCCAAAGCCGCGATCCGCTCATTGTCTGATACTCTCA
GCCAAGAAATTGAGATGTACAACGGTTCTCGCGCCGACAAGTGCCGCTCG
GAGGCTCCAGCCACGGACGTGAAGATCCATACAGTCTTCCCCATGGGCAT
TCTCAGCCCTGGATTCGACAACGAACAGAAGCTCAAGCCGGAGCTTACTA
AGAAGCTGGAGGCTGCTGACAAGCCACAGACTCCGAGGGAGGTTGCAAAC
ATTGCGATCAAGGCCCTGGAGAGGGGCGAGTACATGATCACCACGATGTT
CGTTGGCGATGTGATGAAGGGATCAGCGCTCGGAGGCAGCCAACGGAATT
CATTCATTAAGGATACTTTCACTGGCTGGCTCAGCAACTTGTTGTTCCTG
CATGTCAGCCCCGATCTCAGGAGGCAGGCCTGGAGCTGGGGTGAGAAGCA
CGGCGTCCCATCTCGCCCGAGAGAGTAAACCGTCGTTATCACGGGCGGTT
CGGAGGGGATGGGCAAGGCCGTGGCTTGCCAGCTTGCAGAGAAGGGTGCA
AATGTTGTGCTTGTCGCACGCACGGAGTCGAAGCTCCAGGATGCCCTCGA
GGCTGTCAAGATGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGGGCA
GGGTATGTTTCCATCGTCGCCTCCCATGTGTTGCCCTTAGCATGGGTACG
GCGGCTGAAGCCGACCGGCAGAGATTCCACTACATCTGTGCGGATCTGAC
CAATGCTGCGGAGTGTGACCGTGTCATGGCCGAAGTCACCGAATGGAACC
ACGGACAATCTCCCGATATCGTATGGTGCTGCGCAGGATACTGCAGCCCC
GGCTTCTTTGCCGAGACCCCCGTCCAGACATTGAGGGACCAAATGGATAC
GGTGTACTGGACAGCTGCCAACACTGCTCATGCCATCCTGAGACGGTGGC
TAGTACCTATTAGCCCCAGCCAGCAGATGCCACTACCTCCCAGACACCTT
ATCTTCACATGCTCTACCCTCGCATTTGTGCCCATTGCTGGTTATGCTCC
TTACTCGCCAGCCAAAGCCGCGATCCGCTCATTGTCTGATACTCTCAGCC
AAGAAATTGAGATGTACAACGGTTCTCGCGCCGACAAGTGCCGCTCGGAG
GCTCCAGCCACGGACGTGAAGATCCATACAGTCTTCCCCATGGGCATTCT
CAGCCCTGGATTCGACAACGAACAGAAGCTCAAGCCGGAGCTTACTAAGA
AGCTGGAGGCTGCTGACAAGCCACAGACTCCGAGGGAGGTTGCAAACATT
GCGATCAAGGCCCTGGAGAGGGGCGAGTACATGATCACCACGATGTTCGT
TGGCGATGTGATGAAGGGATCAGCGCTCGGAGGCAGCCAACGGAATTCAT
TCATTAAGGATACTTTCACTGGCTGGCTCAGCAACTTGTTGTTCCTGCAT
GTCAGCCCCGATCTCAGGAGGCAGGCCTGGAGCTGGGGTGAGAAGCACGG
CGTCCCATCTCGCCCGAGAGAGTAAACCGTCGTTATCACGGGCGGTTCGG
AGGGGATGGGCAAGGCCGTGGCTTGCCAGCTTGCAGAGAAGGGTGCAAAT
GTTGTGCTTGTCGCACGCACGGAGTCGAAGCTCCAGGATGCCCTCGAGGC
TGTCAAGATGTTCGGCTTTGGTCGTAATCAGTTCGTCGTTCAGGGCAGGG
TATGTTTCCATCGTCGCCTCCCATGTGTTGCCCTTAGCATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | 3-dehydrosphinganine reductase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:801016..802141 - |
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