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ASPNIDRAFT_38610-T1, ASPNIDRAFT_38610-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_38610-T1
Unique NameASPNIDRAFT_38610-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:195793..197300-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_38610-T1 ID=ASPNIDRAFT_38610-T1|Name=ASPNIDRAFT_38610-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1508bp|location=Sequence derived from alignment at ACJE01000021.1:195793..197300- (Aspergillus niger ATCC 1015)
ATGCCGTCCACTTCCGCGGCCCTAACGCCTGGATTGGCGTCGTTCCTCAA
GTCCTTGAAGACGAATCCGATTGATACATCGATTGACGATCTGATCTCGT
GCGTCCTCGACGTCATATCACCGCGTGTCGCAGCAGCTCGTGCAACATAC
TGACCAGCCTCTAGGCTTCTGAAACGCAGACAGATTCGCCATTCCAGATC
ATGCGCGACCGCAACCGCCTACCTCCTGCGCAGTGTTATCTCAGCTACTC
GGACTTCGGATGCAAACAAGATGATCGAGCGGGTCCAGCATGTGGGAAGG
CGCGTGATGGCCGCTCAGCCCAGGGAAATGGTGGTCGGAAATATTGTCAG
ACGTGTGCTCGGATTGATCCGTGATGAAGCGGAAGACGACAGAGAGGCCG
ACTTCACTCTGAGTGAAGCGGGCTCGGAGAGCCAGCCTCAGACCCCTCGT
GCCTTGGATGGTCAGTCCTGTTTTATAACACATCGAACCAGGATTATGCA
AAAGCTAACCCACAGCGCCGTTTGTAGACCCCTCCGAGGTTCTCTCTTCT
CGCCATGAAGGTTCCGACCGGTCATCCTCGAGACAGCCTTTCACTTCGCT
GTCAGCTACACCCATTTCCATGTTCAGTCTCCTCTCACACCCAGAGCCTG
AGTCGTCTCTGCCTGGCACCCCGGCCTCTGCGTCTCCGTCTGGCCGCCTA
CTGGGCCAAAGTCACAACAAAGACATCCGTGCCGAAGTCCTGGACGGTAT
CAACGAAATTATCGATGAGTTGGGCCAGGTAGACGACCAGATTGCGGCCT
ACGCCCTGGAACACATTCACTCCAACGAAATCATCCTGACACACACATCC
TCAACTACCGTCCAGAAATTCTTGCTCAAGGCTGCGGCCAAGCGCAAGTT
CACCGTGATCCATGCCGAATCTTATCCCAACAACCATGAAGCGACCCATG
CCACTGTCAGCGGACAGGCCCCCAAGGACGACGACATTCTGAGCACCGAG
GCTTTCCAGAAACCTTTGATCGCCCTGGGCATCACTGTTATCCTGATCCC
TGATTCCGCAGTCTTCGCGCTCATGTCCCGTGTCAACAAGGTCATCTTGG
GCACGCACTCGGTTCTTGCCAACGGCGGATTGGTGGCTGCGGCAGGCACG
CGGGTCATCGCTCGCGCGGCCAAGGTGCACCAGACCCCCGTGGTCGTTGT
GAGCGGTGTCTACAAGCTCAGCCCTGTCTACCCATTCGATTTCGACTCGC
TGATCGAGTATGGCGATGTCAGCAAGGTTATTGGATACGAAGACGGTGAC
CTGGTAGACCAGATTGACGTGCAGAACCCGCTGTACGACTATGTCCCTGC
GGAACTTGTCGATCTTTACATCACCAACCTGTAAGCTACCATTCCTTTTG
CCCCGTTTCATCTGCAGAACTGACAAGCATTATAGGGGAGGTCATGCGCC
GTCTTACCTTTACCGTATTGTCTCGGACCACTACCGCAAGGAGGATATCA
ATGTCTAA
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Coding sequence (CDS) from alignment at ACJE01000021.1:195793..197300-

>ASPNIDRAFT_38610-T1 ID=ASPNIDRAFT_38610-T1|Name=ASPNIDRAFT_38610-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5280bp|location=Sequence derived from alignment at ACJE01000021.1:195793..197300- (Aspergillus niger ATCC 1015)
GGGAGGTCATGCGCCGTCTTACCTTTACCGTATTGTCTCGGACCACTACC
GCAAGGAGGATATCAATGTCTAAACCCCTCCGAGGTTCTCTCTTCTCGCC
ATGAAGGTTCCGACCGGTCATCCTCGAGACAGCCTTTCACTTCGCTGTCA
GCTACACCCATTTCCATGTTCAGTCTCCTCTCACACCCAGAGCCTGAGTC
GTCTCTGCCTGGCACCCCGGCCTCTGCGTCTCCGTCTGGCCGCCTACTGG
GCCAAAGTCACAACAAAGACATCCGTGCCGAAGTCCTGGACGGTATCAAC
GAAATTATCGATGAGTTGGGCCAGGTAGACGACCAGATTGCGGCCTACGC
CCTGGAACACATTCACTCCAACGAAATCATCCTGACACACACATCCTCAA
CTACCGTCCAGAAATTCTTGCTCAAGGCTGCGGCCAAGCGCAAGTTCACC
GTGATCCATGCCGAATCTTATCCCAACAACCATGAAGCGACCCATGCCAC
TGTCAGCGGACAGGCCCCCAAGGACGACGACATTCTGAGCACCGAGGCTT
TCCAGAAACCTTTGATCGCCCTGGGCATCACTGTTATCCTGATCCCTGAT
TCCGCAGTCTTCGCGCTCATGTCCCGTGTCAACAAGGTCATCTTGGGCAC
GCACTCGGTTCTTGCCAACGGCGGATTGGTGGCTGCGGCAGGCACGCGGG
TCATCGCTCGCGCGGCCAAGGTGCACCAGACCCCCGTGGTCGTTGTGAGC
GGTGTCTACAAGCTCAGCCCTGTCTACCCATTCGATTTCGACTCGCTGAT
CGAGTATGGCGATGTCAGCAAGGTTATTGGATACGAAGACGGTGACCTGG
TAGACCAGATTGACGTGCAGAACCCGCTGTACGACTATGTCCCTGCGGAA
CTTGTCGATCTTTACATCACCAACCTGCTTCTGAAACGCAGACAGATTCG
CCATTCCAGATCATGCGCGACCGCAACCGCCTACCTCCTGCGCAGTGTTA
TCTCAGCTACTCGGACTTCGGATGCAAACAAGATGATCGAGCGGGTCCAG
CATGTGGGAAGGCGCGTGATGGCCGCTCAGCCCAGGGAAATGGTGGTCGG
AAATATTGTCAGACGTGTGCTCGGATTGATCCGTGATGAAGCGGAAGACG
ACAGAGAGGCCGACTTCACTCTGAGTGAAGCGGGCTCGGAGAGCCAGCCT
CAGACCCCTCGTGCCTTGGATGATGCCGTCCACTTCCGCGGCCCTAACGC
CTGGATTGGCGTCGTTCCTCAAGTCCTTGAAGACGAATCCGATTGATACA
TCGATTGACGATCTGATCTCGGGAGGTCATGCGCCGTCTTACCTTTACCG
TATTGTCTCGGACCACTACCGCAAGGAGGATATCAATGTCTAAACCCCTC
CGAGGTTCTCTCTTCTCGCCATGAAGGTTCCGACCGGTCATCCTCGAGAC
AGCCTTTCACTTCGCTGTCAGCTACACCCATTTCCATGTTCAGTCTCCTC
TCACACCCAGAGCCTGAGTCGTCTCTGCCTGGCACCCCGGCCTCTGCGTC
TCCGTCTGGCCGCCTACTGGGCCAAAGTCACAACAAAGACATCCGTGCCG
AAGTCCTGGACGGTATCAACGAAATTATCGATGAGTTGGGCCAGGTAGAC
GACCAGATTGCGGCCTACGCCCTGGAACACATTCACTCCAACGAAATCAT
CCTGACACACACATCCTCAACTACCGTCCAGAAATTCTTGCTCAAGGCTG
CGGCCAAGCGCAAGTTCACCGTGATCCATGCCGAATCTTATCCCAACAAC
CATGAAGCGACCCATGCCACTGTCAGCGGACAGGCCCCCAAGGACGACGA
CATTCTGAGCACCGAGGCTTTCCAGAAACCTTTGATCGCCCTGGGCATCA
CTGTTATCCTGATCCCTGATTCCGCAGTCTTCGCGCTCATGTCCCGTGTC
AACAAGGTCATCTTGGGCACGCACTCGGTTCTTGCCAACGGCGGATTGGT
GGCTGCGGCAGGCACGCGGGTCATCGCTCGCGCGGCCAAGGTGCACCAGA
CCCCCGTGGTCGTTGTGAGCGGTGTCTACAAGCTCAGCCCTGTCTACCCA
TTCGATTTCGACTCGCTGATCGAGTATGGCGATGTCAGCAAGGTTATTGG
ATACGAAGACGGTGACCTGGTAGACCAGATTGACGTGCAGAACCCGCTGT
ACGACTATGTCCCTGCGGAACTTGTCGATCTTTACATCACCAACCTGCTT
CTGAAACGCAGACAGATTCGCCATTCCAGATCATGCGCGACCGCAACCGC
CTACCTCCTGCGCAGTGTTATCTCAGCTACTCGGACTTCGGATGCAAACA
AGATGATCGAGCGGGTCCAGCATGTGGGAAGGCGCGTGATGGCCGCTCAG
CCCAGGGAAATGGTGGTCGGAAATATTGTCAGACGTGTGCTCGGATTGAT
CCGTGATGAAGCGGAAGACGACAGAGAGGCCGACTTCACTCTGAGTGAAG
CGGGCTCGGAGAGCCAGCCTCAGACCCCTCGTGCCTTGGATGATGCCGTC
CACTTCCGCGGCCCTAACGCCTGGATTGGCGTCGTTCCTCAAGTCCTTGA
AGACGAATCCGATTGATACATCGATTGACGATCTGATCTCGGGAGGTCAT
GCGCCGTCTTACCTTTACCGTATTGTCTCGGACCACTACCGCAAGGAGGA
TATCAATGTCTAAACCCCTCCGAGGTTCTCTCTTCTCGCCATGAAGGTTC
CGACCGGTCATCCTCGAGACAGCCTTTCACTTCGCTGTCAGCTACACCCA
TTTCCATGTTCAGTCTCCTCTCACACCCAGAGCCTGAGTCGTCTCTGCCT
GGCACCCCGGCCTCTGCGTCTCCGTCTGGCCGCCTACTGGGCCAAAGTCA
CAACAAAGACATCCGTGCCGAAGTCCTGGACGGTATCAACGAAATTATCG
ATGAGTTGGGCCAGGTAGACGACCAGATTGCGGCCTACGCCCTGGAACAC
ATTCACTCCAACGAAATCATCCTGACACACACATCCTCAACTACCGTCCA
GAAATTCTTGCTCAAGGCTGCGGCCAAGCGCAAGTTCACCGTGATCCATG
CCGAATCTTATCCCAACAACCATGAAGCGACCCATGCCACTGTCAGCGGA
CAGGCCCCCAAGGACGACGACATTCTGAGCACCGAGGCTTTCCAGAAACC
TTTGATCGCCCTGGGCATCACTGTTATCCTGATCCCTGATTCCGCAGTCT
TCGCGCTCATGTCCCGTGTCAACAAGGTCATCTTGGGCACGCACTCGGTT
CTTGCCAACGGCGGATTGGTGGCTGCGGCAGGCACGCGGGTCATCGCTCG
CGCGGCCAAGGTGCACCAGACCCCCGTGGTCGTTGTGAGCGGTGTCTACA
AGCTCAGCCCTGTCTACCCATTCGATTTCGACTCGCTGATCGAGTATGGC
GATGTCAGCAAGGTTATTGGATACGAAGACGGTGACCTGGTAGACCAGAT
TGACGTGCAGAACCCGCTGTACGACTATGTCCCTGCGGAACTTGTCGATC
TTTACATCACCAACCTGCTTCTGAAACGCAGACAGATTCGCCATTCCAGA
TCATGCGCGACCGCAACCGCCTACCTCCTGCGCAGTGTTATCTCAGCTAC
TCGGACTTCGGATGCAAACAAGATGATCGAGCGGGTCCAGCATGTGGGAA
GGCGCGTGATGGCCGCTCAGCCCAGGGAAATGGTGGTCGGAAATATTGTC
AGACGTGTGCTCGGATTGATCCGTGATGAAGCGGAAGACGACAGAGAGGC
CGACTTCACTCTGAGTGAAGCGGGCTCGGAGAGCCAGCCTCAGACCCCTC
GTGCCTTGGATGATGCCGTCCACTTCCGCGGCCCTAACGCCTGGATTGGC
GTCGTTCCTCAAGTCCTTGAAGACGAATCCGATTGATACATCGATTGACG
ATCTGATCTCGGGAGGTCATGCGCCGTCTTACCTTTACCGTATTGTCTCG
GACCACTACCGCAAGGAGGATATCAATGTCTAAACCCCTCCGAGGTTCTC
TCTTCTCGCCATGAAGGTTCCGACCGGTCATCCTCGAGACAGCCTTTCAC
TTCGCTGTCAGCTACACCCATTTCCATGTTCAGTCTCCTCTCACACCCAG
AGCCTGAGTCGTCTCTGCCTGGCACCCCGGCCTCTGCGTCTCCGTCTGGC
CGCCTACTGGGCCAAAGTCACAACAAAGACATCCGTGCCGAAGTCCTGGA
CGGTATCAACGAAATTATCGATGAGTTGGGCCAGGTAGACGACCAGATTG
CGGCCTACGCCCTGGAACACATTCACTCCAACGAAATCATCCTGACACAC
ACATCCTCAACTACCGTCCAGAAATTCTTGCTCAAGGCTGCGGCCAAGCG
CAAGTTCACCGTGATCCATGCCGAATCTTATCCCAACAACCATGAAGCGA
CCCATGCCACTGTCAGCGGACAGGCCCCCAAGGACGACGACATTCTGAGC
ACCGAGGCTTTCCAGAAACCTTTGATCGCCCTGGGCATCACTGTTATCCT
GATCCCTGATTCCGCAGTCTTCGCGCTCATGTCCCGTGTCAACAAGGTCA
TCTTGGGCACGCACTCGGTTCTTGCCAACGGCGGATTGGTGGCTGCGGCA
GGCACGCGGGTCATCGCTCGCGCGGCCAAGGTGCACCAGACCCCCGTGGT
CGTTGTGAGCGGTGTCTACAAGCTCAGCCCTGTCTACCCATTCGATTTCG
ACTCGCTGATCGAGTATGGCGATGTCAGCAAGGTTATTGGATACGAAGAC
GGTGACCTGGTAGACCAGATTGACGTGCAGAACCCGCTGTACGACTATGT
CCCTGCGGAACTTGTCGATCTTTACATCACCAACCTGCTTCTGAAACGCA
GACAGATTCGCCATTCCAGATCATGCGCGACCGCAACCGCCTACCTCCTG
CGCAGTGTTATCTCAGCTACTCGGACTTCGGATGCAAACAAGATGATCGA
GCGGGTCCAGCATGTGGGAAGGCGCGTGATGGCCGCTCAGCCCAGGGAAA
TGGTGGTCGGAAATATTGTCAGACGTGTGCTCGGATTGATCCGTGATGAA
GCGGAAGACGACAGAGAGGCCGACTTCACTCTGAGTGAAGCGGGCTCGGA
GAGCCAGCCTCAGACCCCTCGTGCCTTGGATGATGCCGTCCACTTCCGCG
GCCCTAACGCCTGGATTGGCGTCGTTCCTCAAGTCCTTGAAGACGAATCC
GATTGATACATCGATTGACGATCTGATCTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38610ASPNIDRAFT_38610Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38610-T1ASPNIDRAFT_38610-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38610-T1.cdsASPNIDRAFT_38610-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38610-T1.exon4ASPNIDRAFT_38610-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_38610-T1.exon3ASPNIDRAFT_38610-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_38610-T1.exon2ASPNIDRAFT_38610-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_38610-T1.exon1ASPNIDRAFT_38610-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR037171
DBxrefInterPro:IPR000649
DBxrefInterPro:IPR042529
DBxrefPFAM:PF01008
Product beta subunit
Producttranslation initiation factor 2B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:195793..197300 -
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