You are here

Home

ASPNIDRAFT_38727-T1, ASPNIDRAFT_38727-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_38727-T1
Unique NameASPNIDRAFT_38727-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:182875..184068-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_38727-T1 ID=ASPNIDRAFT_38727-T1|Name=ASPNIDRAFT_38727-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1194bp|location=Sequence derived from alignment at ACJE01000019.1:182875..184068- (Aspergillus niger ATCC 1015)
ATGGCGTCAAGTAAGTCGCGAATTGTTTCCATGGCAATCCTCTTCCACTG
ACTAGTGTTAGATCAATTCTCTGTCGCATCCCCGCCGACGGATGCTATCT
CCGCCTTGAAGTTCTCGCCCGACCCCGACTCCACGCGAATCGTTGTTTCT
TCCTGGGATAAGAACGTGTATCTGTACGACTTGCGCGATGAAAATGGTAC
CGTCGGAGAAGGCAAGCTGTTACAGAAGTTTGAGCATCGCGCTCCGGTGT
TGGATGTGTGTTTCGGCGCAACCGAGGATGAGATCTACACGGCTGGCTTG
GATTGGGACGTCAAGAAGTGAGTCCATGTCTGTTCTGTTTGGGCTTCGGT
AGCAACCAGCGCATAACCAACCTATTCCCTGCTGACAATAAACAGAATTG
ATGTAGCATCATCCACCCAGACCGTCCTCAGCAGCCACGAAGCTGGTGTT
CGAAGCGTCGTTTTCAGCAAGGAACACAACCTAGTAATATCCGCCTCTTG
GGACTCCACGTTGCATGTGCACCCGACGAACGATCCCGCCACAGCCCCCG
CTATCATTCCCCTCCCCTCGAAGCCCTTCTCCATGTCTCTTACCGCTACG
AAGCTCGTTGTCGCAATGGCTTCCCGCGCCCTACACATCTACGATCTGAA
AGCATTGGCTATGCTCACCGCTCAGTCGGAGGGTACGGTCCCCAACAAGA
TTGAAATCGAACCCTGGCAGCGAAGGGAGAGCAGCTTGAAGTTCATGACT
CGCTCAGTGGCATGCATGCCCGACGATGCAGGATACGCGTCATCCAGCAT
CGAGGGCCGTGTCGCGGTCGAATGGTTCGATCCGTCTGCTGAGTCGCAAG
CCCGCAAATATGCCTTCAAGTGTCACAGACAGACGGCGGATGATGTCGAC
GTCGTTTACCCTGTCAATGCGCTTGCGTTCCACCCGGTCCACGGTACGTT
TGCTTCGGGCGGTGGTGATGGAGTGGTTGCGCTTTGGGACGGTATTGCGA
AGAGGAGAATCAGACAGTATCAGAAGTATCCGTCGAGTGTGGCTGCTGTG
GACTTTAGCGGTAACGGAAAGTACCTGGCGATCGCGATTAGTCCGGGCTT
CGAGGATGGAAAAGATGATGTTGTCGAAGGGACGGTTAAGATCTTTGTAC
GTGAGCTTGGAGAGACGGAGGCGAAGGGGAAGGGCGCCAAATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:182875..184068-

>ASPNIDRAFT_38727-T1 ID=ASPNIDRAFT_38727-T1|Name=ASPNIDRAFT_38727-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3213bp|location=Sequence derived from alignment at ACJE01000019.1:182875..184068- (Aspergillus niger ATCC 1015)
AATTGATGTAGCATCATCCACCCAGACCGTCCTCAGCAGCCACGAAGCTG
GTGTTCGAAGCGTCGTTTTCAGCAAGGAACACAACCTAGTAATATCCGCC
TCTTGGGACTCCACGTTGCATGTGCACCCGACGAACGATCCCGCCACAGC
CCCCGCTATCATTCCCCTCCCCTCGAAGCCCTTCTCCATGTCTCTTACCG
CTACGAAGCTCGTTGTCGCAATGGCTTCCCGCGCCCTACACATCTACGAT
CTGAAAGCATTGGCTATGCTCACCGCTCAGTCGGAGGGTACGGTCCCCAA
CAAGATTGAAATCGAACCCTGGCAGCGAAGGGAGAGCAGCTTGAAGTTCA
TGACTCGCTCAGTGGCATGCATGCCCGACGATGCAGGATACGCGTCATCC
AGCATCGAGGGCCGTGTCGCGGTCGAATGGTTCGATCCGTCTGCTGAGTC
GCAAGCCCGCAAATATGCCTTCAAGTGTCACAGACAGACGGCGGATGATG
TCGACGTCGTTTACCCTGTCAATGCGCTTGCGTTCCACCCGGTCCACGGT
ACGTTTGCTTCGGGCGGTGGTGATGGAGTGGTTGCGCTTTGGGACGGTAT
TGCGAAGAGGAGAATCAGACAGTATCAGAAGTATCCGTCGAGTGTGGCTG
CTGTGGACTTTAGCGGTAACGGAAAGTACCTGGCGATCGCGATTAGTCCG
GGCTTCGAGGATGGAAAAGATGATGTTGTCGAAGGGACGGTTAAGATCTT
TGTACGTGAGCTTGGAGAGACGGAGGCGAAGGGGAAGGGCGCCAAATAAT
GTTAGATCAATTCTCTGTCGCATCCCCGCCGACGGATGCTATCTCCGCCT
TGAAGTTCTCGCCCGACCCCGACTCCACGCGAATCGTTGTTTCTTCCTGG
GATAAGAACGTGTATCTGTACGACTTGCGCGATGAAAATGGTACCGTCGG
AGAAGGCAAGCTGTTACAGAAGTTTGAGCATCGCGCTCCGGTGTTGGATG
TGTGTTTCGGCGCAACCGAGGATGAGATCTACACGGCTGGCTTGGATTGG
GACGTCAAGAAATGGCGTCAAAATTGATGTAGCATCATCCACCCAGACCG
TCCTCAGCAGCCACGAAGCTGGTGTTCGAAGCGTCGTTTTCAGCAAGGAA
CACAACCTAGTAATATCCGCCTCTTGGGACTCCACGTTGCATGTGCACCC
GACGAACGATCCCGCCACAGCCCCCGCTATCATTCCCCTCCCCTCGAAGC
CCTTCTCCATGTCTCTTACCGCTACGAAGCTCGTTGTCGCAATGGCTTCC
CGCGCCCTACACATCTACGATCTGAAAGCATTGGCTATGCTCACCGCTCA
GTCGGAGGGTACGGTCCCCAACAAGATTGAAATCGAACCCTGGCAGCGAA
GGGAGAGCAGCTTGAAGTTCATGACTCGCTCAGTGGCATGCATGCCCGAC
GATGCAGGATACGCGTCATCCAGCATCGAGGGCCGTGTCGCGGTCGAATG
GTTCGATCCGTCTGCTGAGTCGCAAGCCCGCAAATATGCCTTCAAGTGTC
ACAGACAGACGGCGGATGATGTCGACGTCGTTTACCCTGTCAATGCGCTT
GCGTTCCACCCGGTCCACGGTACGTTTGCTTCGGGCGGTGGTGATGGAGT
GGTTGCGCTTTGGGACGGTATTGCGAAGAGGAGAATCAGACAGTATCAGA
AGTATCCGTCGAGTGTGGCTGCTGTGGACTTTAGCGGTAACGGAAAGTAC
CTGGCGATCGCGATTAGTCCGGGCTTCGAGGATGGAAAAGATGATGTTGT
CGAAGGGACGGTTAAGATCTTTGTACGTGAGCTTGGAGAGACGGAGGCGA
AGGGGAAGGGCGCCAAATAATGTTAGATCAATTCTCTGTCGCATCCCCGC
CGACGGATGCTATCTCCGCCTTGAAGTTCTCGCCCGACCCCGACTCCACG
CGAATCGTTGTTTCTTCCTGGGATAAGAACGTGTATCTGTACGACTTGCG
CGATGAAAATGGTACCGTCGGAGAAGGCAAGCTGTTACAGAAGTTTGAGC
ATCGCGCTCCGGTGTTGGATGTGTGTTTCGGCGCAACCGAGGATGAGATC
TACACGGCTGGCTTGGATTGGGACGTCAAGAAATGGCGTCAAAATTGATG
TAGCATCATCCACCCAGACCGTCCTCAGCAGCCACGAAGCTGGTGTTCGA
AGCGTCGTTTTCAGCAAGGAACACAACCTAGTAATATCCGCCTCTTGGGA
CTCCACGTTGCATGTGCACCCGACGAACGATCCCGCCACAGCCCCCGCTA
TCATTCCCCTCCCCTCGAAGCCCTTCTCCATGTCTCTTACCGCTACGAAG
CTCGTTGTCGCAATGGCTTCCCGCGCCCTACACATCTACGATCTGAAAGC
ATTGGCTATGCTCACCGCTCAGTCGGAGGGTACGGTCCCCAACAAGATTG
AAATCGAACCCTGGCAGCGAAGGGAGAGCAGCTTGAAGTTCATGACTCGC
TCAGTGGCATGCATGCCCGACGATGCAGGATACGCGTCATCCAGCATCGA
GGGCCGTGTCGCGGTCGAATGGTTCGATCCGTCTGCTGAGTCGCAAGCCC
GCAAATATGCCTTCAAGTGTCACAGACAGACGGCGGATGATGTCGACGTC
GTTTACCCTGTCAATGCGCTTGCGTTCCACCCGGTCCACGGTACGTTTGC
TTCGGGCGGTGGTGATGGAGTGGTTGCGCTTTGGGACGGTATTGCGAAGA
GGAGAATCAGACAGTATCAGAAGTATCCGTCGAGTGTGGCTGCTGTGGAC
TTTAGCGGTAACGGAAAGTACCTGGCGATCGCGATTAGTCCGGGCTTCGA
GGATGGAAAAGATGATGTTGTCGAAGGGACGGTTAAGATCTTTGTACGTG
AGCTTGGAGAGACGGAGGCGAAGGGGAAGGGCGCCAAATAATGTTAGATC
AATTCTCTGTCGCATCCCCGCCGACGGATGCTATCTCCGCCTTGAAGTTC
TCGCCCGACCCCGACTCCACGCGAATCGTTGTTTCTTCCTGGGATAAGAA
CGTGTATCTGTACGACTTGCGCGATGAAAATGGTACCGTCGGAGAAGGCA
AGCTGTTACAGAAGTTTGAGCATCGCGCTCCGGTGTTGGATGTGTGTTTC
GGCGCAACCGAGGATGAGATCTACACGGCTGGCTTGGATTGGGACGTCAA
GAAATGGCGTCAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38727ASPNIDRAFT_38727Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38727-T1ASPNIDRAFT_38727-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38727-T1.cdsASPNIDRAFT_38727-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38727-T1.exon3ASPNIDRAFT_38727-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_38727-T1.exon2ASPNIDRAFT_38727-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_38727-T1.exon1ASPNIDRAFT_38727-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:182875..184068 -
Powered by Drupal