You are here

Home

ASPNIDRAFT_39000-T1, ASPNIDRAFT_39000-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_39000-T1
Unique NameASPNIDRAFT_39000-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1060915..1062306-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_39000-T1 ID=ASPNIDRAFT_39000-T1|Name=ASPNIDRAFT_39000-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1392bp|location=Sequence derived from alignment at ACJE01000019.1:1060915..1062306- (Aspergillus niger ATCC 1015)
ATGGACTTCCAACGATTACGTTTCAAACAAGTGATGGTCAGCGGGTCTTC
AGTTGCGACCACGCAGCAGGAGTACAAGACTTTACCGAACCGAGCGCGAA
ACAAAAGCAAACTGGGCTGTCGAGAATGCAAGACAAAGCGGGTTAAATGC
GATGAGGCCTATCCAACGTGCAAGCGGTGCCAGCGTCAAGGCCTTGTCTG
TTCGTCGGCACCGCGGCCAACACAGTGGCAAGTTGAGGCACCGTGGCTCT
CATTGCAGCCTAAAACACATGTCAATCGACGTCTACTACAGTATTACCTG
GAGAAAGTCAGCCAAGCGTTCGTTATAGATCCTGAGAACAATCCGTTCTC
TTTTCCTATATTGAAAGATATTGCCCAATCTCCGGCACTTCTCCATGCTA
TCCAGTCAATCAGTGCCAGCCATGAACAGTACTTCCCGGTCCAAGCCCCC
ATTCTGGCCCTTGAGGAACGTGGCAAAGCCATAGCTTGCCTTCGAAGAGA
GATAGATCAAGTCCAACGTGCTAATTACACGCACTTTCTGACCATAATGC
TGTTGTCTCTTATGCAAGTTGCTGGTCCTGACCCGAAGGACTATGGCAAA
CAGCACTTATTCGGTGCCTGTGCCTTGATCAACAGTATGCTCCAAGACAC
ATCTGTGTCGACGACTAACGACCCTGTGGTTCGACTCTGCCTGGGAGTCT
ATCTTTACTGGGACATGTGCAGTTCGTTCTTAGTAAAGCCCGGTGAACTA
CAGGGTGTCAACTCATTTAACATATCTCTCGCGGTGCGCAGGATGGGTGA
CTGGCACCACCCAATGTATGGAACATGTAGCCGTCTACTACTTACCATAG
CGAATGTCGGACGATATTGCCGGCAGGTACATGATATGCCGCAGAGACGC
AACTTCGCCCAAGAAGATATGCTGGAGGCGGAGCTTAGTAACTGGACGAC
GAGCTCCAATAACCCCGACCTGATCCACTTATATGAAGCGTTCCGCAACC
ACGGTCTTGTTCTCCTTTATCAATCTCGTGCACATGCACAGAGGAGTCTT
TCTACTGATACGAATTCGACCAAAGCACAAGAGTCATTGATCCTACGGTA
CGCCGAAGAAACAGTCCGTCATCTGATGCTAATCCCTTCGTCCTCGTACT
ATCTCAATTTTCAATCCCTTGCTCTTCTATCAGCCGGGTCCGAATTGACC
GAGTCGCATCACCTCCTGCGCGATAAAGTGCGTGACAGACTGCGGGCCAT
CTACTCTTTGAATCGCATACCCGCAAATTTAATGGCTCTTCAACTTGTTG
AAGAACTTTGGGATGCCCGAGACAGTGGTAATTCCACTTCCTTCTGGCTA
TCGCACATGCTGCAGAAGGATTGGCTGTTGCTTCTAGTATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:1060915..1062306-

>ASPNIDRAFT_39000-T1 ID=ASPNIDRAFT_39000-T1|Name=ASPNIDRAFT_39000-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1392bp|location=Sequence derived from alignment at ACJE01000019.1:1060915..1062306- (Aspergillus niger ATCC 1015)
ATGGACTTCCAACGATTACGTTTCAAACAAGTGATGGTCAGCGGGTCTTC
AGTTGCGACCACGCAGCAGGAGTACAAGACTTTACCGAACCGAGCGCGAA
ACAAAAGCAAACTGGGCTGTCGAGAATGCAAGACAAAGCGGGTTAAATGC
GATGAGGCCTATCCAACGTGCAAGCGGTGCCAGCGTCAAGGCCTTGTCTG
TTCGTCGGCACCGCGGCCAACACAGTGGCAAGTTGAGGCACCGTGGCTCT
CATTGCAGCCTAAAACACATGTCAATCGACGTCTACTACAGTATTACCTG
GAGAAAGTCAGCCAAGCGTTCGTTATAGATCCTGAGAACAATCCGTTCTC
TTTTCCTATATTGAAAGATATTGCCCAATCTCCGGCACTTCTCCATGCTA
TCCAGTCAATCAGTGCCAGCCATGAACAGTACTTCCCGGTCCAAGCCCCC
ATTCTGGCCCTTGAGGAACGTGGCAAAGCCATAGCTTGCCTTCGAAGAGA
GATAGATCAAGTCCAACGTGCTAATTACACGCACTTTCTGACCATAATGC
TGTTGTCTCTTATGCAAGTTGCTGGTCCTGACCCGAAGGACTATGGCAAA
CAGCACTTATTCGGTGCCTGTGCCTTGATCAACAGTATGCTCCAAGACAC
ATCTGTGTCGACGACTAACGACCCTGTGGTTCGACTCTGCCTGGGAGTCT
ATCTTTACTGGGACATGTGCAGTTCGTTCTTAGTAAAGCCCGGTGAACTA
CAGGGTGTCAACTCATTTAACATATCTCTCGCGGTGCGCAGGATGGGTGA
CTGGCACCACCCAATGTATGGAACATGTAGCCGTCTACTACTTACCATAG
CGAATGTCGGACGATATTGCCGGCAGGTACATGATATGCCGCAGAGACGC
AACTTCGCCCAAGAAGATATGCTGGAGGCGGAGCTTAGTAACTGGACGAC
GAGCTCCAATAACCCCGACCTGATCCACTTATATGAAGCGTTCCGCAACC
ACGGTCTTGTTCTCCTTTATCAATCTCGTGCACATGCACAGAGGAGTCTT
TCTACTGATACGAATTCGACCAAAGCACAAGAGTCATTGATCCTACGGTA
CGCCGAAGAAACAGTCCGTCATCTGATGCTAATCCCTTCGTCCTCGTACT
ATCTCAATTTTCAATCCCTTGCTCTTCTATCAGCCGGGTCCGAATTGACC
GAGTCGCATCACCTCCTGCGCGATAAAGTGCGTGACAGACTGCGGGCCAT
CTACTCTTTGAATCGCATACCCGCAAATTTAATGGCTCTTCAACTTGTTG
AAGAACTTTGGGATGCCCGAGACAGTGGTAATTCCACTTCCTTCTGGCTA
TCGCACATGCTGCAGAAGGATTGGCTGTTGCTTCTAGTATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39000ASPNIDRAFT_39000Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39000-T1.cdsASPNIDRAFT_39000-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39000-T1.exon1ASPNIDRAFT_39000-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39000-T1ASPNIDRAFT_39000-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1060915..1062306 -
Powered by Drupal