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ASPNIDRAFT_39279-T1, ASPNIDRAFT_39279-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_39279-T1
Unique NameASPNIDRAFT_39279-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1899358..1900732+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_39279-T1 ID=ASPNIDRAFT_39279-T1|Name=ASPNIDRAFT_39279-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1375bp|location=Sequence derived from alignment at ACJE01000019.1:1899358..1900732+ (Aspergillus niger ATCC 1015)
ATGCATTTCTTTGACTTACCTCAAGAGCTTCTGGAAGCTATCTTGGCACA
AGCCTCGCGTGGCTCTCTCGCCAGCCTCGCGCGGGTTTGCCAACGCCTTC
GACCGCTCGCCGAGCGCATCTTGTACCAGTCGGTGTACTTGCGAAATCAC
GACGGAGAAAAGTTCACCTACGCACTGGACTGTGTGCCAGCTCGCGCTGG
GTATGTTAGAGAGCTGATAGTTCACTACCATTATGTCGATGTTGAAGATG
AAGAGGAGTATTATCCCTTGTATGCAGAAACCCTCTCCCCGACGATCGGG
CGTCTCGTAAATCTGCGAACACTTGTCATCAAGGGGCTCGAGTTCGATGC
GGACCGCGAAGAGGACGATGAAATCATTGGGGGGTATGAAAGAGTCATCG
CAGAAGCCGAGAAATGGGACACACTTTTTGCGCAATCTGCTGTGCCGGGC
TCGCAGATCCTTCCTTCTCTTACAAAATGTCTGCCAATAACCTTCACTGC
TCTCTTACCTCATATGCTAATATTTCTCAGGTATGATGATCATGGACGAC
ATCGCGCCCAATCAACCAGCGTGGGACTTTAGTCTGAGGGGCGCCGTGCT
AATCCATCCGTGCCTTCAAGACCTGACCATCGTCGGGGGCGAAATTGAGA
GCCTGAAGAATCATGTGCCTTCACCACGATCAACGCCCCTCGAGAGGCTA
AGCCTGTTCGGCTGCGATGTGTCCCCCTCTGCGATGGGCGAGATGTTGTC
GCTGCCACGTGCCTTGAAACATTTGACGTATAAAGGGGCTCCATGGTGTT
ACAGGCCCACAAATCTTATGCCGAACCGGCAAATATACGTCGACAAGATA
AAGGCACAAGCGGATTCGCTTCTGAGTCTTGACATTGACTTCTATCCAGG
GGTTGTTGACAATCCCCCGGTAGACTTCACCGCCCTCCAGTGCCTGGAAC
AACTTACCGTCGAATCAGATGCATTGAGAGGAACTGGAGAATACGACCCG
AAGAACAACAGCAAACTATGCCTCTGGAAAAGCCCCGAGCTAAAATGTCA
GCTTCCTCCAAGCCTCAAGCATCTAGTGCTGTTCCTATACTGCCCGAAGA
ACCCGCCAGATTGGCGTACTCTAATTATACTTTACAACTGGATTTCGCGG
GGAAGTTTGCCGAACCTGGAAAAGGTCACGTTCCAGATAGCAAAACCGTG
TGGGCAAGAGATACTGGACCGTTCGATCGGAGGAAATGAAATGTCGATTG
GTCAGGCTTTTGGAGAGGTCAAAGTGCAATTGCAGTTCGAGCTGGTCCCT
AACAGCAACAACGACGGCTACGAGCTTTTCGACTGCCCTGAATGCGGCGT
AAATTGGCGAAACATGCATGCTTGA
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Coding sequence (CDS) from alignment at ACJE01000019.1:1899358..1900732+

>ASPNIDRAFT_39279-T1 ID=ASPNIDRAFT_39279-T1|Name=ASPNIDRAFT_39279-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2646bp|location=Sequence derived from alignment at ACJE01000019.1:1899358..1900732+ (Aspergillus niger ATCC 1015)
ATGCATTTCTTTGACTTACCTCAAGAGCTTCTGGAAGCTATCTTGGCACA
AGCCTCGCGTGGCTCTCTCGCCAGCCTCGCGCGGGTTTGCCAACGCCTTC
GACCGCTCGCCGAGCGCATCTTGTACCAGTCGGTGTACTTGCGAAATCAC
GACGGAGAAAAGTTCACCTACGCACTGGACTGTGTGCCAGCTCGCGCTGG
GTATGTTAGAGAGCTGATAGTTCACTACCATTATGTCGATGTTGAAGATG
AAGAGGAGTATTATCCCTTGTATGCAGAAACCCTCTCCCCGACGATCGGG
CGTCTCGTAAATCTGCGAACACTTGTCATCAAGGGGCTCGAGTTCGATGC
GGACCGCGAAGAGGACGATGAAATCATTGGGGGGTATGAAAGAGTCATCG
CAGAAGCCGAGAAATGGGACACACTTTTTGCGCAATCTGCTGTGCCGGGC
TCGCAGATCCTTCCTTCTCTTACAAAATGTATGATGATCATGGACGACAT
CGCGCCCAATCAACCAGCGTGGGACTTTAGTCTGAGGGGCGCCGTGCTAA
TCCATCCGTGCCTTCAAGACCTGACCATCGTCGGGGGCGAAATTGAGAGC
CTGAAGAATCATGTGCCTTCACCACGATCAACGCCCCTCGAGAGGCTAAG
CCTGTTCGGCTGCGATGTGTCCCCCTCTGCGATGGGCGAGATGTTGTCGC
TGCCACGTGCCTTGAAACATTTGACGTATAAAGGGGCTCCATGGTGTTAC
AGGCCCACAAATCTTATGCCGAACCGGCAAATATACGTCGACAAGATAAA
GGCACAAGCGGATTCGCTTCTGAGTCTTGACATTGACTTCTATCCAGGGG
TTGTTGACAATCCCCCGGTAGACTTCACCGCCCTCCAGTGCCTGGAACAA
CTTACCGTCGAATCAGATGCATTGAGAGGAACTGGAGAATACGACCCGAA
GAACAACAGCAAACTATGCCTCTGGAAAAGCCCCGAGCTAAAATGTCAGC
TTCCTCCAAGCCTCAAGCATCTAGTGCTGTTCCTATACTGCCCGAAGAAC
CCGCCAGATTGGCGTACTCTAATTATACTTTACAACTGGATTTCGCGGGG
AAGTTTGCCGAACCTGGAAAAGGTCACGTTCCAGATAGCAAAACCGTGTG
GGCAAGAGATACTGGACCGTTCGATCGGAGGAAATGAAATGTCGATTGGT
CAGGCTTTTGGAGAGGTCAAAGTGCAATTGCAGTTCGAGCTGGTCCCTAA
CAGCAACAACGACGGCTACGAGCTTTTCGACTGCCCTGAATGCGGCGTAA
ATTGGCGAAACATGCATGCTTGAATGCATTTCTTTGACTTACCTCAAGAG
CTTCTGGAAGCTATCTTGGCACAAGCCTCGCGTGGCTCTCTCGCCAGCCT
CGCGCGGGTTTGCCAACGCCTTCGACCGCTCGCCGAGCGCATCTTGTACC
AGTCGGTGTACTTGCGAAATCACGACGGAGAAAAGTTCACCTACGCACTG
GACTGTGTGCCAGCTCGCGCTGGGTATGTTAGAGAGCTGATAGTTCACTA
CCATTATGTCGATGTTGAAGATGAAGAGGAGTATTATCCCTTGTATGCAG
AAACCCTCTCCCCGACGATCGGGCGTCTCGTAAATCTGCGAACACTTGTC
ATCAAGGGGCTCGAGTTCGATGCGGACCGCGAAGAGGACGATGAAATCAT
TGGGGGGTATGAAAGAGTCATCGCAGAAGCCGAGAAATGGGACACACTTT
TTGCGCAATCTGCTGTGCCGGGCTCGCAGATCCTTCCTTCTCTTACAAAA
TGTATGATGATCATGGACGACATCGCGCCCAATCAACCAGCGTGGGACTT
TAGTCTGAGGGGCGCCGTGCTAATCCATCCGTGCCTTCAAGACCTGACCA
TCGTCGGGGGCGAAATTGAGAGCCTGAAGAATCATGTGCCTTCACCACGA
TCAACGCCCCTCGAGAGGCTAAGCCTGTTCGGCTGCGATGTGTCCCCCTC
TGCGATGGGCGAGATGTTGTCGCTGCCACGTGCCTTGAAACATTTGACGT
ATAAAGGGGCTCCATGGTGTTACAGGCCCACAAATCTTATGCCGAACCGG
CAAATATACGTCGACAAGATAAAGGCACAAGCGGATTCGCTTCTGAGTCT
TGACATTGACTTCTATCCAGGGGTTGTTGACAATCCCCCGGTAGACTTCA
CCGCCCTCCAGTGCCTGGAACAACTTACCGTCGAATCAGATGCATTGAGA
GGAACTGGAGAATACGACCCGAAGAACAACAGCAAACTATGCCTCTGGAA
AAGCCCCGAGCTAAAATGTCAGCTTCCTCCAAGCCTCAAGCATCTAGTGC
TGTTCCTATACTGCCCGAAGAACCCGCCAGATTGGCGTACTCTAATTATA
CTTTACAACTGGATTTCGCGGGGAAGTTTGCCGAACCTGGAAAAGGTCAC
GTTCCAGATAGCAAAACCGTGTGGGCAAGAGATACTGGACCGTTCGATCG
GAGGAAATGAAATGTCGATTGGTCAGGCTTTTGGAGAGGTCAAAGTGCAA
TTGCAGTTCGAGCTGGTCCCTAACAGCAACAACGACGGCTACGAGCTTTT
CGACTGCCCTGAATGCGGCGTAAATTGGCGAAACATGCATGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39279ASPNIDRAFT_39279Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39279-T1.exon1ASPNIDRAFT_39279-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_39279-T1.exon2ASPNIDRAFT_39279-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39279-T1.cdsASPNIDRAFT_39279-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39279-T1ASPNIDRAFT_39279-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
DBxrefPFAM:PF00646
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1899358..1900732 +
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