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ASPNIDRAFT_39337-T1, ASPNIDRAFT_39337-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_39337-T1
Unique NameASPNIDRAFT_39337-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2097168..2098822-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_39337-T1 ID=ASPNIDRAFT_39337-T1|Name=ASPNIDRAFT_39337-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1655bp|location=Sequence derived from alignment at ACJE01000019.1:2097168..2098822- (Aspergillus niger ATCC 1015)
ATGCCTCTGTCTCAGGGTCTTCTATTTTAGGGGGGATTGGGTGGAGTTTG
CATATATAATTCCTGGTGACGCTGCGGAATGCTGATTTTGCTAAAGAAGA
AAAGAGCTATCGCACTTCACTCATCATCGGCACCATGACCTGGCCCACGT
CCTCGTGGCAATTTCTTTGCTTTCCATCACCACCTCGATCCATGCCCAAC
TAACGGGATCAGTTGGACCCCTGACCTCCGTTTCAGACAAGGCCGCTGTG
AAGACCTGCAATGTCCTCGACTACGGAGCCAGGTCGGACAATACCACCGA
TGTGGGACAGCCCATTATCGACGCTTTCGCTGACTGCGGTAGCGGTGGTC
TCATTTATATCCCTGAGGGTGACTATCTCTTGAAAAACTGGATCTCTCTG
GAAAATGGCTCCGCGTGGGCTATCCAGCTCGATGGCGTGCTTTACCGGGA
CTCTTCGCCCTCCTCCCAGTCGTACATGTTCGAGATCTCCGGTGGCAGAG
ATTTCGAGCTGTTTAGTTCAAATGCGACAGGTGCTATTCAAGGTAGCGGG
TACCTTTACCACCGAGATGATACGTACACTGGTCCCCGGATGCTGCACAT
TTCCGGGGTGTCGGATTGGTCTGTTCATGACCTGGTGTTGGTAGACTCGC
CTATGTTCCACTTTGTCATCGACGGCGGTTACAATGGAGAAGTGTACAAT
ATGGCCATCCGTGGTGCTGATCACGGTGGTCTGGATGGTATCGATGTCTA
TGGCGACAATATGTGGATTCACGATGTGACTTCCGCTGCCCCAAGAACTT
AATTTTGTATTGAGATAAGCTAATGATATGGTAGATTATGGTCACCAACA
AGGACGAATGTGTCACAACCAAGGTTAGTGAATAGCAATATCTCCCAACT
ACCAAAGTACTAATTCTGATTGCAACAGACCAACTCCCACAACTTCCTAA
TTGAGAACATCTACTGCAACTCCAGCGGCGGATGCGCCATCGGATCCCTC
GGTTCCGGTGCCAACGTCAGCAACATCGTCTACCGCAACGTCTACACATG
GGACTCGAATCAGATGATGATGATCAAGAGCAACGGCGGCTCGGGCGATG
TATCCAACGCCGTGTTTGAGAATTTCATCGGTCCATAAGCCAGCCCCATC
CCTTCCATTCCCCAACGCAAAAGCTAATAAGCGATAAGGCCACGGAAACG
CTTACTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGCTATCGAC
GGCGACGGCATCTACTACCATAACATCACATTCCAGAACTGGACGGGAAC
CGCCGTCGATGGTGAAACCCGGCCTCCTATTCGAGTCATCTGCCCCGAAG
ACACACCCTGCACCGAGATCGCCCTCGTCCAGATTGACCTGTGGGTTGAA
GAAGGTGGTTACGATGAGTACATTTGCAAGAATGCGTATGGATCGGGCTA
CTGTCTTGACTCTGCTACCGGTACTTCCACCCCTTACACAACAACTACTT
ATGTGAACTCTGCCCCGACGGGATATGAGGCGCCCACTATGACTGATGAT
TTGGCCACCGCTTTTGGCACGTCGGCTTCGATTCCGATTCCTACTATTCC
GGCGTCTTTCTTCCCTGGTGTGACACCGATTAGTGCCGTGGCTGGGAGTT
CTTGA
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Coding sequence (CDS) from alignment at ACJE01000019.1:2097168..2098822-

>ASPNIDRAFT_39337-T1 ID=ASPNIDRAFT_39337-T1|Name=ASPNIDRAFT_39337-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6975bp|location=Sequence derived from alignment at ACJE01000019.1:2097168..2098822- (Aspergillus niger ATCC 1015)
GCCACGGAAACGCTTACTCCCTCGACCTCGACAGTTACTGGAGCAGCATG
GACGCTATCGACGGCGACGGCATCTACTACCATAACATCACATTCCAGAA
CTGGACGGGAACCGCCGTCGATGGTGAAACCCGGCCTCCTATTCGAGTCA
TCTGCCCCGAAGACACACCCTGCACCGAGATCGCCCTCGTCCAGATTGAC
CTGTGGGTTGAAGAAGGTGGTTACGATGAGTACATTTGCAAGAATGCGTA
TGGATCGGGCTACTGTCTTGACTCTGCTACCGGTACTTCCACCCCTTACA
CAACAACTACTTATGTGAACTCTGCCCCGACGGGATATGAGGCGCCCACT
ATGACTGATGATTTGGCCACCGCTTTTGGCACGTCGGCTTCGATTCCGAT
TCCTACTATTCCGGCGTCTTTCTTCCCTGGTGTGACACCGATTAGTGCCG
TGGCTGGGAGTTCTTGAACCAACTCCCACAACTTCCTAATTGAGAACATC
TACTGCAACTCCAGCGGCGGATGCGCCATCGGATCCCTCGGTTCCGGTGC
CAACGTCAGCAACATCGTCTACCGCAACGTCTACACATGGGACTCGAATC
AGATGATGATGATCAAGAGCAACGGCGGCTCGGGCGATGTATCCAACGCC
GTGTTTGAGAATTTCATCGATTATGGTCACCAACAAGGACGAATGTGTCA
CAACCAAGAGCTATCGCACTTCACTCATCATCGGCACCATGACCTGGCCC
ACGTCCTCGTGGCAATTTCTTTGCTTTCCATCACCACCTCGATCCATGCC
CAACTAACGGGATCAGTTGGACCCCTGACCTCCGTTTCAGACAAGGCCGC
TGTGAAGACCTGCAATGTCCTCGACTACGGAGCCAGGTCGGACAATACCA
CCGATGTGGGACAGCCCATTATCGACGCTTTCGCTGACTGCGGTAGCGGT
GGTCTCATTTATATCCCTGAGGGTGACTATCTCTTGAAAAACTGGATCTC
TCTGGAAAATGGCTCCGCGTGGGCTATCCAGCTCGATGGCGTGCTTTACC
GGGACTCTTCGCCCTCCTCCCAGTCGTACATGTTCGAGATCTCCGGTGGC
AGAGATTTCGAGCTGTTTAGTTCAAATGCGACAGGTGCTATTCAAGGTAG
CGGGTACCTTTACCACCGAGATGATACGTACACTGGTCCCCGGATGCTGC
ACATTTCCGGGGTGTCGGATTGGTCTGTTCATGACCTGGTGTTGGTAGAC
TCGCCTATGTTCCACTTTGTCATCGACGGCGGTTACAATGGAGAAGTGTA
CAATATGGCCATCCGTGGTGCTGATCACGGTGGTCTGGATGGTATCGATG
TCTATGGCGACAATATGTGGATTCACGATATGCCTCTGTCTCAGGGCCAC
GGAAACGCTTACTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGC
TATCGACGGCGACGGCATCTACTACCATAACATCACATTCCAGAACTGGA
CGGGAACCGCCGTCGATGGTGAAACCCGGCCTCCTATTCGAGTCATCTGC
CCCGAAGACACACCCTGCACCGAGATCGCCCTCGTCCAGATTGACCTGTG
GGTTGAAGAAGGTGGTTACGATGAGTACATTTGCAAGAATGCGTATGGAT
CGGGCTACTGTCTTGACTCTGCTACCGGTACTTCCACCCCTTACACAACA
ACTACTTATGTGAACTCTGCCCCGACGGGATATGAGGCGCCCACTATGAC
TGATGATTTGGCCACCGCTTTTGGCACGTCGGCTTCGATTCCGATTCCTA
CTATTCCGGCGTCTTTCTTCCCTGGTGTGACACCGATTAGTGCCGTGGCT
GGGAGTTCTTGAACCAACTCCCACAACTTCCTAATTGAGAACATCTACTG
CAACTCCAGCGGCGGATGCGCCATCGGATCCCTCGGTTCCGGTGCCAACG
TCAGCAACATCGTCTACCGCAACGTCTACACATGGGACTCGAATCAGATG
ATGATGATCAAGAGCAACGGCGGCTCGGGCGATGTATCCAACGCCGTGTT
TGAGAATTTCATCGATTATGGTCACCAACAAGGACGAATGTGTCACAACC
AAGAGCTATCGCACTTCACTCATCATCGGCACCATGACCTGGCCCACGTC
CTCGTGGCAATTTCTTTGCTTTCCATCACCACCTCGATCCATGCCCAACT
AACGGGATCAGTTGGACCCCTGACCTCCGTTTCAGACAAGGCCGCTGTGA
AGACCTGCAATGTCCTCGACTACGGAGCCAGGTCGGACAATACCACCGAT
GTGGGACAGCCCATTATCGACGCTTTCGCTGACTGCGGTAGCGGTGGTCT
CATTTATATCCCTGAGGGTGACTATCTCTTGAAAAACTGGATCTCTCTGG
AAAATGGCTCCGCGTGGGCTATCCAGCTCGATGGCGTGCTTTACCGGGAC
TCTTCGCCCTCCTCCCAGTCGTACATGTTCGAGATCTCCGGTGGCAGAGA
TTTCGAGCTGTTTAGTTCAAATGCGACAGGTGCTATTCAAGGTAGCGGGT
ACCTTTACCACCGAGATGATACGTACACTGGTCCCCGGATGCTGCACATT
TCCGGGGTGTCGGATTGGTCTGTTCATGACCTGGTGTTGGTAGACTCGCC
TATGTTCCACTTTGTCATCGACGGCGGTTACAATGGAGAAGTGTACAATA
TGGCCATCCGTGGTGCTGATCACGGTGGTCTGGATGGTATCGATGTCTAT
GGCGACAATATGTGGATTCACGATATGCCTCTGTCTCAGGGCCACGGAAA
CGCTTACTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGCTATCG
ACGGCGACGGCATCTACTACCATAACATCACATTCCAGAACTGGACGGGA
ACCGCCGTCGATGGTGAAACCCGGCCTCCTATTCGAGTCATCTGCCCCGA
AGACACACCCTGCACCGAGATCGCCCTCGTCCAGATTGACCTGTGGGTTG
AAGAAGGTGGTTACGATGAGTACATTTGCAAGAATGCGTATGGATCGGGC
TACTGTCTTGACTCTGCTACCGGTACTTCCACCCCTTACACAACAACTAC
TTATGTGAACTCTGCCCCGACGGGATATGAGGCGCCCACTATGACTGATG
ATTTGGCCACCGCTTTTGGCACGTCGGCTTCGATTCCGATTCCTACTATT
CCGGCGTCTTTCTTCCCTGGTGTGACACCGATTAGTGCCGTGGCTGGGAG
TTCTTGAACCAACTCCCACAACTTCCTAATTGAGAACATCTACTGCAACT
CCAGCGGCGGATGCGCCATCGGATCCCTCGGTTCCGGTGCCAACGTCAGC
AACATCGTCTACCGCAACGTCTACACATGGGACTCGAATCAGATGATGAT
GATCAAGAGCAACGGCGGCTCGGGCGATGTATCCAACGCCGTGTTTGAGA
ATTTCATCGATTATGGTCACCAACAAGGACGAATGTGTCACAACCAAGAG
CTATCGCACTTCACTCATCATCGGCACCATGACCTGGCCCACGTCCTCGT
GGCAATTTCTTTGCTTTCCATCACCACCTCGATCCATGCCCAACTAACGG
GATCAGTTGGACCCCTGACCTCCGTTTCAGACAAGGCCGCTGTGAAGACC
TGCAATGTCCTCGACTACGGAGCCAGGTCGGACAATACCACCGATGTGGG
ACAGCCCATTATCGACGCTTTCGCTGACTGCGGTAGCGGTGGTCTCATTT
ATATCCCTGAGGGTGACTATCTCTTGAAAAACTGGATCTCTCTGGAAAAT
GGCTCCGCGTGGGCTATCCAGCTCGATGGCGTGCTTTACCGGGACTCTTC
GCCCTCCTCCCAGTCGTACATGTTCGAGATCTCCGGTGGCAGAGATTTCG
AGCTGTTTAGTTCAAATGCGACAGGTGCTATTCAAGGTAGCGGGTACCTT
TACCACCGAGATGATACGTACACTGGTCCCCGGATGCTGCACATTTCCGG
GGTGTCGGATTGGTCTGTTCATGACCTGGTGTTGGTAGACTCGCCTATGT
TCCACTTTGTCATCGACGGCGGTTACAATGGAGAAGTGTACAATATGGCC
ATCCGTGGTGCTGATCACGGTGGTCTGGATGGTATCGATGTCTATGGCGA
CAATATGTGGATTCACGATATGCCTCTGTCTCAGGGCCACGGAAACGCTT
ACTCCCTCGACCTCGACAGTTACTGGAGCAGCATGGACGCTATCGACGGC
GACGGCATCTACTACCATAACATCACATTCCAGAACTGGACGGGAACCGC
CGTCGATGGTGAAACCCGGCCTCCTATTCGAGTCATCTGCCCCGAAGACA
CACCCTGCACCGAGATCGCCCTCGTCCAGATTGACCTGTGGGTTGAAGAA
GGTGGTTACGATGAGTACATTTGCAAGAATGCGTATGGATCGGGCTACTG
TCTTGACTCTGCTACCGGTACTTCCACCCCTTACACAACAACTACTTATG
TGAACTCTGCCCCGACGGGATATGAGGCGCCCACTATGACTGATGATTTG
GCCACCGCTTTTGGCACGTCGGCTTCGATTCCGATTCCTACTATTCCGGC
GTCTTTCTTCCCTGGTGTGACACCGATTAGTGCCGTGGCTGGGAGTTCTT
GAACCAACTCCCACAACTTCCTAATTGAGAACATCTACTGCAACTCCAGC
GGCGGATGCGCCATCGGATCCCTCGGTTCCGGTGCCAACGTCAGCAACAT
CGTCTACCGCAACGTCTACACATGGGACTCGAATCAGATGATGATGATCA
AGAGCAACGGCGGCTCGGGCGATGTATCCAACGCCGTGTTTGAGAATTTC
ATCGATTATGGTCACCAACAAGGACGAATGTGTCACAACCAAGAGCTATC
GCACTTCACTCATCATCGGCACCATGACCTGGCCCACGTCCTCGTGGCAA
TTTCTTTGCTTTCCATCACCACCTCGATCCATGCCCAACTAACGGGATCA
GTTGGACCCCTGACCTCCGTTTCAGACAAGGCCGCTGTGAAGACCTGCAA
TGTCCTCGACTACGGAGCCAGGTCGGACAATACCACCGATGTGGGACAGC
CCATTATCGACGCTTTCGCTGACTGCGGTAGCGGTGGTCTCATTTATATC
CCTGAGGGTGACTATCTCTTGAAAAACTGGATCTCTCTGGAAAATGGCTC
CGCGTGGGCTATCCAGCTCGATGGCGTGCTTTACCGGGACTCTTCGCCCT
CCTCCCAGTCGTACATGTTCGAGATCTCCGGTGGCAGAGATTTCGAGCTG
TTTAGTTCAAATGCGACAGGTGCTATTCAAGGTAGCGGGTACCTTTACCA
CCGAGATGATACGTACACTGGTCCCCGGATGCTGCACATTTCCGGGGTGT
CGGATTGGTCTGTTCATGACCTGGTGTTGGTAGACTCGCCTATGTTCCAC
TTTGTCATCGACGGCGGTTACAATGGAGAAGTGTACAATATGGCCATCCG
TGGTGCTGATCACGGTGGTCTGGATGGTATCGATGTCTATGGCGACAATA
TGTGGATTCACGATATGCCTCTGTCTCAGGGCCACGGAAACGCTTACTCC
CTCGACCTCGACAGTTACTGGAGCAGCATGGACGCTATCGACGGCGACGG
CATCTACTACCATAACATCACATTCCAGAACTGGACGGGAACCGCCGTCG
ATGGTGAAACCCGGCCTCCTATTCGAGTCATCTGCCCCGAAGACACACCC
TGCACCGAGATCGCCCTCGTCCAGATTGACCTGTGGGTTGAAGAAGGTGG
TTACGATGAGTACATTTGCAAGAATGCGTATGGATCGGGCTACTGTCTTG
ACTCTGCTACCGGTACTTCCACCCCTTACACAACAACTACTTATGTGAAC
TCTGCCCCGACGGGATATGAGGCGCCCACTATGACTGATGATTTGGCCAC
CGCTTTTGGCACGTCGGCTTCGATTCCGATTCCTACTATTCCGGCGTCTT
TCTTCCCTGGTGTGACACCGATTAGTGCCGTGGCTGGGAGTTCTTGAACC
AACTCCCACAACTTCCTAATTGAGAACATCTACTGCAACTCCAGCGGCGG
ATGCGCCATCGGATCCCTCGGTTCCGGTGCCAACGTCAGCAACATCGTCT
ACCGCAACGTCTACACATGGGACTCGAATCAGATGATGATGATCAAGAGC
AACGGCGGCTCGGGCGATGTATCCAACGCCGTGTTTGAGAATTTCATCGA
TTATGGTCACCAACAAGGACGAATGTGTCACAACCAAGAGCTATCGCACT
TCACTCATCATCGGCACCATGACCTGGCCCACGTCCTCGTGGCAATTTCT
TTGCTTTCCATCACCACCTCGATCCATGCCCAACTAACGGGATCAGTTGG
ACCCCTGACCTCCGTTTCAGACAAGGCCGCTGTGAAGACCTGCAATGTCC
TCGACTACGGAGCCAGGTCGGACAATACCACCGATGTGGGACAGCCCATT
ATCGACGCTTTCGCTGACTGCGGTAGCGGTGGTCTCATTTATATCCCTGA
GGGTGACTATCTCTTGAAAAACTGGATCTCTCTGGAAAATGGCTCCGCGT
GGGCTATCCAGCTCGATGGCGTGCTTTACCGGGACTCTTCGCCCTCCTCC
CAGTCGTACATGTTCGAGATCTCCGGTGGCAGAGATTTCGAGCTGTTTAG
TTCAAATGCGACAGGTGCTATTCAAGGTAGCGGGTACCTTTACCACCGAG
ATGATACGTACACTGGTCCCCGGATGCTGCACATTTCCGGGGTGTCGGAT
TGGTCTGTTCATGACCTGGTGTTGGTAGACTCGCCTATGTTCCACTTTGT
CATCGACGGCGGTTACAATGGAGAAGTGTACAATATGGCCATCCGTGGTG
CTGATCACGGTGGTCTGGATGGTATCGATGTCTATGGCGACAATATGTGG
ATTCACGATATGCCTCTGTCTCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39337ASPNIDRAFT_39337Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39337-T1ASPNIDRAFT_39337-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39337-T1.cdsASPNIDRAFT_39337-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39337-T1.exon5ASPNIDRAFT_39337-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_39337-T1.exon4ASPNIDRAFT_39337-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_39337-T1.exon3ASPNIDRAFT_39337-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_39337-T1.exon2ASPNIDRAFT_39337-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_39337-T1.exon1ASPNIDRAFT_39337-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2097168..2098822 -
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