You are here

Home

ASPNIDRAFT_39359-T1, ASPNIDRAFT_39359-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_39359-T1
Unique NameASPNIDRAFT_39359-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2162038..2163006-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_39359-T1 ID=ASPNIDRAFT_39359-T1|Name=ASPNIDRAFT_39359-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=969bp|location=Sequence derived from alignment at ACJE01000019.1:2162038..2163006- (Aspergillus niger ATCC 1015)
ATGTCGCCGGCTCGTCGTGCCCTTATTGCTATCACCTCCGCTCACGCCCC
CCTCTATCCGGAAGGCAAGGAGACTGGTGAGTTTTTTTTTCCCCTCTTTG
GCACCTAGATATGATATCTGCCAGATACATTTCTGACTCAGACAAACAGG
TCTCTTTATTACTGAAGCCCTGCACCCCTTCGAGGTCTTCCGTAAAGCCG
GTTTCGAGGTTGACCTGGTTTCCGAAACGGGAACCTACCAGCCTGATTGG
CTCTCACAGCAGAAGGATTGGCTAAACGATAAAGACCGCGCCGTGTGGGA
GGACCACTCGAGTGAATTCCGCTCCAAGCTTGACAACCTGCTGAAGCCGA
GCGATATTGATCCAGAAAAAGTGAACGACCACCAACCAGGCCAGGTTATA
GCCGATCCAAATGTCCAATTGCTAATTGAGATCATAGTATGGACTTTTCT
TTGCTTCGGCTGGACATGCGTCTTTGATCGACTACCCGGACGCCAAGGGT
CTACAAGCGATCGCTTCCAAAATCTTTACCTCGGGCGGTATTGTCTCAGC
AGTGTAGGTTATCTCCCTATCCCCGATCACGGTGGACTCTCGGAGCTTAC
GAGACTTTCTTAGCTGTCACGGCGGCGCCATCTTCCCCGGCGTTATAGAT
CCCAGTACCAACAAGTCTATCATCGATTCTCGCAGAGTGACGGGCTTCAC
CACTCGCGGCGAAGAGGAGGAAAACGTACTCGACACCATCAAGAGCTGGA
ACAGGCCGACTATTGAGGCTTCCGCAGCCAGTTGTGGGGCCACTTGTGAG
TTGTTCTCTTTTGGTTCATGAACGATCTGTGCTAATAATTGCAGATGTCT
CTCCCCCGGGACCATGGGACGCATTTACCATTACAGATGGGCGCGTCGTG
ACAGGTGCCAACCCTGCTAGTGCCCATGTCACTGCCGAAGCCGCCGTGAC
CGCCTTCGACAAGCTCTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:2162038..2163006-

>ASPNIDRAFT_39359-T1 ID=ASPNIDRAFT_39359-T1|Name=ASPNIDRAFT_39359-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3600bp|location=Sequence derived from alignment at ACJE01000019.1:2162038..2163006- (Aspergillus niger ATCC 1015)
ATGTCTCTCCCCCGGGACCATGGGACGCATTTACCATTACAGATGGGCGC
GTCGTGACAGGTGCCAACCCTGCTAGTGCCCATGTCACTGCCGAAGCCGC
CGTGACCGCCTTCGACAAGCTCTAACTGTCACGGCGGCGCCATCTTCCCC
GGCGTTATAGATCCCAGTACCAACAAGTCTATCATCGATTCTCGCAGAGT
GACGGGCTTCACCACTCGCGGCGAAGAGGAGGAAAACGTACTCGACACCA
TCAAGAGCTGGAACAGGCCGACTATTGAGGCTTCCGCAGCCAGTTGTGGG
GCCACTTTATGGACTTTTCTTTGCTTCGGCTGGACATGCGTCTTTGATCG
ACTACCCGGACGCCAAGGGTCTACAAGCGATCGCTTCCAAAATCTTTACC
TCGGGCGGTATTGTCTCAGCAGTGTCTCTTTATTACTGAAGCCCTGCACC
CCTTCGAGGTCTTCCGTAAAGCCGGTTTCGAGGTTGACCTGGTTTCCGAA
ACGGGAACCTACCAGCCTGATTGGCTCTCACAGCAGAAGGATTGGCTAAA
CGATAAAGACCGCGCCGTGTGGGAGGACCACTCGAGTGAATTCCGCTCCA
AGCTTGACAACCTGCTGAAGCCGAGCGATATTGATCCAGAAAAAATGTCG
CCGGCTCGTCGTGCCCTTATTGCTATCACCTCCGCTCACGCCCCCCTCTA
TCCGGAAGGCAAGGAGACTGATGTCTCTCCCCCGGGACCATGGGACGCAT
TTACCATTACAGATGGGCGCGTCGTGACAGGTGCCAACCCTGCTAGTGCC
CATGTCACTGCCGAAGCCGCCGTGACCGCCTTCGACAAGCTCTAACTGTC
ACGGCGGCGCCATCTTCCCCGGCGTTATAGATCCCAGTACCAACAAGTCT
ATCATCGATTCTCGCAGAGTGACGGGCTTCACCACTCGCGGCGAAGAGGA
GGAAAACGTACTCGACACCATCAAGAGCTGGAACAGGCCGACTATTGAGG
CTTCCGCAGCCAGTTGTGGGGCCACTTTATGGACTTTTCTTTGCTTCGGC
TGGACATGCGTCTTTGATCGACTACCCGGACGCCAAGGGTCTACAAGCGA
TCGCTTCCAAAATCTTTACCTCGGGCGGTATTGTCTCAGCAGTGTCTCTT
TATTACTGAAGCCCTGCACCCCTTCGAGGTCTTCCGTAAAGCCGGTTTCG
AGGTTGACCTGGTTTCCGAAACGGGAACCTACCAGCCTGATTGGCTCTCA
CAGCAGAAGGATTGGCTAAACGATAAAGACCGCGCCGTGTGGGAGGACCA
CTCGAGTGAATTCCGCTCCAAGCTTGACAACCTGCTGAAGCCGAGCGATA
TTGATCCAGAAAAAATGTCGCCGGCTCGTCGTGCCCTTATTGCTATCACC
TCCGCTCACGCCCCCCTCTATCCGGAAGGCAAGGAGACTGATGTCTCTCC
CCCGGGACCATGGGACGCATTTACCATTACAGATGGGCGCGTCGTGACAG
GTGCCAACCCTGCTAGTGCCCATGTCACTGCCGAAGCCGCCGTGACCGCC
TTCGACAAGCTCTAACTGTCACGGCGGCGCCATCTTCCCCGGCGTTATAG
ATCCCAGTACCAACAAGTCTATCATCGATTCTCGCAGAGTGACGGGCTTC
ACCACTCGCGGCGAAGAGGAGGAAAACGTACTCGACACCATCAAGAGCTG
GAACAGGCCGACTATTGAGGCTTCCGCAGCCAGTTGTGGGGCCACTTTAT
GGACTTTTCTTTGCTTCGGCTGGACATGCGTCTTTGATCGACTACCCGGA
CGCCAAGGGTCTACAAGCGATCGCTTCCAAAATCTTTACCTCGGGCGGTA
TTGTCTCAGCAGTGTCTCTTTATTACTGAAGCCCTGCACCCCTTCGAGGT
CTTCCGTAAAGCCGGTTTCGAGGTTGACCTGGTTTCCGAAACGGGAACCT
ACCAGCCTGATTGGCTCTCACAGCAGAAGGATTGGCTAAACGATAAAGAC
CGCGCCGTGTGGGAGGACCACTCGAGTGAATTCCGCTCCAAGCTTGACAA
CCTGCTGAAGCCGAGCGATATTGATCCAGAAAAAATGTCGCCGGCTCGTC
GTGCCCTTATTGCTATCACCTCCGCTCACGCCCCCCTCTATCCGGAAGGC
AAGGAGACTGATGTCTCTCCCCCGGGACCATGGGACGCATTTACCATTAC
AGATGGGCGCGTCGTGACAGGTGCCAACCCTGCTAGTGCCCATGTCACTG
CCGAAGCCGCCGTGACCGCCTTCGACAAGCTCTAACTGTCACGGCGGCGC
CATCTTCCCCGGCGTTATAGATCCCAGTACCAACAAGTCTATCATCGATT
CTCGCAGAGTGACGGGCTTCACCACTCGCGGCGAAGAGGAGGAAAACGTA
CTCGACACCATCAAGAGCTGGAACAGGCCGACTATTGAGGCTTCCGCAGC
CAGTTGTGGGGCCACTTTATGGACTTTTCTTTGCTTCGGCTGGACATGCG
TCTTTGATCGACTACCCGGACGCCAAGGGTCTACAAGCGATCGCTTCCAA
AATCTTTACCTCGGGCGGTATTGTCTCAGCAGTGTCTCTTTATTACTGAA
GCCCTGCACCCCTTCGAGGTCTTCCGTAAAGCCGGTTTCGAGGTTGACCT
GGTTTCCGAAACGGGAACCTACCAGCCTGATTGGCTCTCACAGCAGAAGG
ATTGGCTAAACGATAAAGACCGCGCCGTGTGGGAGGACCACTCGAGTGAA
TTCCGCTCCAAGCTTGACAACCTGCTGAAGCCGAGCGATATTGATCCAGA
AAAAATGTCGCCGGCTCGTCGTGCCCTTATTGCTATCACCTCCGCTCACG
CCCCCCTCTATCCGGAAGGCAAGGAGACTGATGTCTCTCCCCCGGGACCA
TGGGACGCATTTACCATTACAGATGGGCGCGTCGTGACAGGTGCCAACCC
TGCTAGTGCCCATGTCACTGCCGAAGCCGCCGTGACCGCCTTCGACAAGC
TCTAACTGTCACGGCGGCGCCATCTTCCCCGGCGTTATAGATCCCAGTAC
CAACAAGTCTATCATCGATTCTCGCAGAGTGACGGGCTTCACCACTCGCG
GCGAAGAGGAGGAAAACGTACTCGACACCATCAAGAGCTGGAACAGGCCG
ACTATTGAGGCTTCCGCAGCCAGTTGTGGGGCCACTTTATGGACTTTTCT
TTGCTTCGGCTGGACATGCGTCTTTGATCGACTACCCGGACGCCAAGGGT
CTACAAGCGATCGCTTCCAAAATCTTTACCTCGGGCGGTATTGTCTCAGC
AGTGTCTCTTTATTACTGAAGCCCTGCACCCCTTCGAGGTCTTCCGTAAA
GCCGGTTTCGAGGTTGACCTGGTTTCCGAAACGGGAACCTACCAGCCTGA
TTGGCTCTCACAGCAGAAGGATTGGCTAAACGATAAAGACCGCGCCGTGT
GGGAGGACCACTCGAGTGAATTCCGCTCCAAGCTTGACAACCTGCTGAAG
CCGAGCGATATTGATCCAGAAAAAATGTCGCCGGCTCGTCGTGCCCTTAT
TGCTATCACCTCCGCTCACGCCCCCCTCTATCCGGAAGGCAAGGAGACTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39359ASPNIDRAFT_39359Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39359-T1ASPNIDRAFT_39359-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39359-T1.cdsASPNIDRAFT_39359-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39359-T1.exon5ASPNIDRAFT_39359-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_39359-T1.exon4ASPNIDRAFT_39359-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_39359-T1.exon3ASPNIDRAFT_39359-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_39359-T1.exon2ASPNIDRAFT_39359-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_39359-T1.exon1ASPNIDRAFT_39359-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteMEROPS:MER0031431
DBxrefInterPro:IPR002818
DBxrefInterPro:IPR029062
DBxrefPFAM:PF01965
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2162038..2163006 -
Powered by Drupal