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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000009.1:2230330..2231886- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_39630-T1 ID=ASPNIDRAFT_39630-T1|Name=ASPNIDRAFT_39630-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1557bp|location=Sequence derived from alignment at ACJE01000009.1:2230330..2231886- (Aspergillus niger ATCC 1015)
ATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCGGTAAGGACATTTCT
TTCTTTTTTCTTGCTCTGTCTCCTTGCTCATCTCGCCGCAATTGCTAATT
CTGGTATGCTTTGCTTAGAAAGTCCGGCAATCATGGAGCAAATGGAACCT
ATATAACATGAAGCGGTTCTCCGTCAAGAACCCCATGTTCCGAACTCATT
TCCAGCAAAAATGGGATGCCAAGTCGATAGCCCGTGGATATCATGGCGAA
CAAGTCTCCGAGAAGCACTGGGTGCGCATGTTTTCTCCCCGCATTCGTAG
CGTGGTGCCCATGGATCCCGCCAAACTGGCCAAAGACGATGGTTCTGCCT
TGTCTGCCGGCCGTGGTATGGGTGTTGAGTCGCGTTCTGACACAGCCGCG
CATCTTAAACTCTCAAAATACGAGAAAGCCGACGCCGACCAACTGGAAAG
GCCTTTTCCCTATACACAGGCGACTTTTGCTCCCCTAGAGCGCCGGCTGG
ATGTGGCCGTCTTCCGGGCTATGTTCGCTAGCAGTACGAGGCAGGCGCGG
CAATTTGTCATTCATGGAGCGGTCACTGTCAATGGAAAGAAGGTGAGTGT
GCCTGAGACGCTGCATGGTCCTTTTCATTTAAGCGCTGCCATCGAAAGCT
GATCGGTTACGTTTGACAGATGAGATACCCCGGTTACCTGCTCAACCCTG
GTGATCTTTTCCAGGTCGAACCCGAGCGTGTCATGTTTGCCACCGGTGCT
CCAAAGGACAAGTACGACCGGCGCGCGGCTCGTGTTGCTGAGAAGGAGGC
GGAGAAGGAGGCGGAGAAAAAGGCCGAGGAAGCCGAGGAAGCCAAGGAAG
AGAGTGAGGCCAAGGAGGAGGATAAGCAAGAGGTCCAGTCCCCGCGCCAG
ACCTTGCAGGCTATGCTGTCGCAGGCCAAGAACATCATGGCCGACAGCAA
GTCGGTGCTTCCCGCCAAGCGGAAGCAGGAGCTGCGTGGATTCCAGAAGG
CCGTCCGTCGCGTGCTGTCTCGCTCTGATTCAAACGTCCTCGCCGACAAC
CTGGAGGCTCAATTTTCCGAGCTGACTTTGCTGCTCAAGGCCAAGAAGGC
AGAGAAGACGAAGAAGTCGGGCAACAAGGAAAGACAGGATACCACATCTG
CCAACTCCGAGAAGTCCACCGATACCAAGGCTGCTACTGAGGTAGACAGC
GAGACTCAGCCCGGCGATAAGCTGTCCGAGGCATTCCGCCAGGCTGCTGA
GAACCCCGAACAGGAGGTGGATACGTCCGAGTTGACCGATGAGGAGTTCA
AGATTCTTCGTCGTGCCCTTATCCAGATGCGTGATAACCCGATCGATCAT
TCGAAGCCGTACGCTACGCCCTGGCGGCCGCGGGACTTCATGAGCGCCTT
TGCCACGATCCCTCGCTACCTGGAAGTGAACCCTAAGGCTTGTGCGGCCG
TCTACCTGCGCCACCCCGTTGTTCGTCCGGGCTTGTCGGAGGTTCCATCG
CCCTTCAACCTTGCGACTGGAGCGCTGGCATACCACTGGTACCTGAGACG
GCGGTAG back to topCoding sequence (CDS) from alignment at ACJE01000009.1:2230330..2231886- >ASPNIDRAFT_39630-T1 ID=ASPNIDRAFT_39630-T1|Name=ASPNIDRAFT_39630-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4194bp|location=Sequence derived from alignment at ACJE01000009.1:2230330..2231886- (Aspergillus niger ATCC 1015)
ATGAGATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTCGA
ACCCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACC
GGCGCGCGGCTCGTGTTGCTGAGAAGGAGGCGGAGAAGGAGGCGGAGAAA
AAGGCCGAGGAAGCCGAGGAAGCCAAGGAAGAGAGTGAGGCCAAGGAGGA
GGATAAGCAAGAGGTCCAGTCCCCGCGCCAGACCTTGCAGGCTATGCTGT
CGCAGGCCAAGAACATCATGGCCGACAGCAAGTCGGTGCTTCCCGCCAAG
CGGAAGCAGGAGCTGCGTGGATTCCAGAAGGCCGTCCGTCGCGTGCTGTC
TCGCTCTGATTCAAACGTCCTCGCCGACAACCTGGAGGCTCAATTTTCCG
AGCTGACTTTGCTGCTCAAGGCCAAGAAGGCAGAGAAGACGAAGAAGTCG
GGCAACAAGGAAAGACAGGATACCACATCTGCCAACTCCGAGAAGTCCAC
CGATACCAAGGCTGCTACTGAGGTAGACAGCGAGACTCAGCCCGGCGATA
AGCTGTCCGAGGCATTCCGCCAGGCTGCTGAGAACCCCGAACAGGAGGTG
GATACGTCCGAGTTGACCGATGAGGAGTTCAAGATTCTTCGTCGTGCCCT
TATCCAGATGCGTGATAACCCGATCGATCATTCGAAGCCGTACGCTACGC
CCTGGCGGCCGCGGGACTTCATGAGCGCCTTTGCCACGATCCCTCGCTAC
CTGGAAGTGAACCCTAAGGCTTGTGCGGCCGTCTACCTGCGCCACCCCGT
TGTTCGTCCGGGCTTGTCGGAGGTTCCATCGCCCTTCAACCTTGCGACTG
GAGCGCTGGCATACCACTGGTACCTGAGACGGCGGTAGAAAGTCCGGCAA
TCATGGAGCAAATGGAACCTATATAACATGAAGCGGTTCTCCGTCAAGAA
CCCCATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCAAGTCGATAG
CCCGTGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGGGTGCGCATG
TTTTCTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGCCAAACTGGC
CAAAGACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGGGTGTTGAGT
CGCGTTCTGACACAGCCGCGCATCTTAAACTCTCAAAATACGAGAAAGCC
GACGCCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGCGACTTTTGC
TCCCCTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTATGTTCGCTA
GCAGTACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCGGTCACTGTC
AATGGAAAGAAGATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCGAT
GAGATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTCGAAC
CCGAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACCGG
CGCGCGGCTCGTGTTGCTGAGAAGGAGGCGGAGAAGGAGGCGGAGAAAAA
GGCCGAGGAAGCCGAGGAAGCCAAGGAAGAGAGTGAGGCCAAGGAGGAGG
ATAAGCAAGAGGTCCAGTCCCCGCGCCAGACCTTGCAGGCTATGCTGTCG
CAGGCCAAGAACATCATGGCCGACAGCAAGTCGGTGCTTCCCGCCAAGCG
GAAGCAGGAGCTGCGTGGATTCCAGAAGGCCGTCCGTCGCGTGCTGTCTC
GCTCTGATTCAAACGTCCTCGCCGACAACCTGGAGGCTCAATTTTCCGAG
CTGACTTTGCTGCTCAAGGCCAAGAAGGCAGAGAAGACGAAGAAGTCGGG
CAACAAGGAAAGACAGGATACCACATCTGCCAACTCCGAGAAGTCCACCG
ATACCAAGGCTGCTACTGAGGTAGACAGCGAGACTCAGCCCGGCGATAAG
CTGTCCGAGGCATTCCGCCAGGCTGCTGAGAACCCCGAACAGGAGGTGGA
TACGTCCGAGTTGACCGATGAGGAGTTCAAGATTCTTCGTCGTGCCCTTA
TCCAGATGCGTGATAACCCGATCGATCATTCGAAGCCGTACGCTACGCCC
TGGCGGCCGCGGGACTTCATGAGCGCCTTTGCCACGATCCCTCGCTACCT
GGAAGTGAACCCTAAGGCTTGTGCGGCCGTCTACCTGCGCCACCCCGTTG
TTCGTCCGGGCTTGTCGGAGGTTCCATCGCCCTTCAACCTTGCGACTGGA
GCGCTGGCATACCACTGGTACCTGAGACGGCGGTAGAAAGTCCGGCAATC
ATGGAGCAAATGGAACCTATATAACATGAAGCGGTTCTCCGTCAAGAACC
CCATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCAAGTCGATAGCC
CGTGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGGGTGCGCATGTT
TTCTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGCCAAACTGGCCA
AAGACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGGGTGTTGAGTCG
CGTTCTGACACAGCCGCGCATCTTAAACTCTCAAAATACGAGAAAGCCGA
CGCCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGCGACTTTTGCTC
CCCTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTATGTTCGCTAGC
AGTACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCGGTCACTGTCAA
TGGAAAGAAGATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCGATGA
GATACCCCGGTTACCTGCTCAACCCTGGTGATCTTTTCCAGGTCGAACCC
GAGCGTGTCATGTTTGCCACCGGTGCTCCAAAGGACAAGTACGACCGGCG
CGCGGCTCGTGTTGCTGAGAAGGAGGCGGAGAAGGAGGCGGAGAAAAAGG
CCGAGGAAGCCGAGGAAGCCAAGGAAGAGAGTGAGGCCAAGGAGGAGGAT
AAGCAAGAGGTCCAGTCCCCGCGCCAGACCTTGCAGGCTATGCTGTCGCA
GGCCAAGAACATCATGGCCGACAGCAAGTCGGTGCTTCCCGCCAAGCGGA
AGCAGGAGCTGCGTGGATTCCAGAAGGCCGTCCGTCGCGTGCTGTCTCGC
TCTGATTCAAACGTCCTCGCCGACAACCTGGAGGCTCAATTTTCCGAGCT
GACTTTGCTGCTCAAGGCCAAGAAGGCAGAGAAGACGAAGAAGTCGGGCA
ACAAGGAAAGACAGGATACCACATCTGCCAACTCCGAGAAGTCCACCGAT
ACCAAGGCTGCTACTGAGGTAGACAGCGAGACTCAGCCCGGCGATAAGCT
GTCCGAGGCATTCCGCCAGGCTGCTGAGAACCCCGAACAGGAGGTGGATA
CGTCCGAGTTGACCGATGAGGAGTTCAAGATTCTTCGTCGTGCCCTTATC
CAGATGCGTGATAACCCGATCGATCATTCGAAGCCGTACGCTACGCCCTG
GCGGCCGCGGGACTTCATGAGCGCCTTTGCCACGATCCCTCGCTACCTGG
AAGTGAACCCTAAGGCTTGTGCGGCCGTCTACCTGCGCCACCCCGTTGTT
CGTCCGGGCTTGTCGGAGGTTCCATCGCCCTTCAACCTTGCGACTGGAGC
GCTGGCATACCACTGGTACCTGAGACGGCGGTAGAAAGTCCGGCAATCAT
GGAGCAAATGGAACCTATATAACATGAAGCGGTTCTCCGTCAAGAACCCC
ATGTTCCGAACTCATTTCCAGCAAAAATGGGATGCCAAGTCGATAGCCCG
TGGATATCATGGCGAACAAGTCTCCGAGAAGCACTGGGTGCGCATGTTTT
CTCCCCGCATTCGTAGCGTGGTGCCCATGGATCCCGCCAAACTGGCCAAA
GACGATGGTTCTGCCTTGTCTGCCGGCCGTGGTATGGGTGTTGAGTCGCG
TTCTGACACAGCCGCGCATCTTAAACTCTCAAAATACGAGAAAGCCGACG
CCGACCAACTGGAAAGGCCTTTTCCCTATACACAGGCGACTTTTGCTCCC
CTAGAGCGCCGGCTGGATGTGGCCGTCTTCCGGGCTATGTTCGCTAGCAG
TACGAGGCAGGCGCGGCAATTTGTCATTCATGGAGCGGTCACTGTCAATG
GAAAGAAGATGAGGAACAGGGCGACCCAGCATCTGAGCAAGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0019843 | rRNA binding |
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | BUSCO:EOG092651FJ |
| DBxref | InterPro:IPR018079 |
| DBxref | InterPro:IPR036986 |
| DBxref | InterPro:IPR002942 |
| DBxref | PFAM:PF01479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000009.1 | supercontig | ACJE01000009.1:2230330..2231886 - |
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