You are here

Home

ASPNIDRAFT_39638-T1, ASPNIDRAFT_39638-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_39638-T1
Unique NameASPNIDRAFT_39638-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:2190260..2191336+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_39638-T1 ID=ASPNIDRAFT_39638-T1|Name=ASPNIDRAFT_39638-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1077bp|location=Sequence derived from alignment at ACJE01000009.1:2190260..2191336+ (Aspergillus niger ATCC 1015)
ATGGAATCGAAAGCCACTCTGGGAAGTATCCAGAAAGCCGTCTGGGCCGG
AAAGCTGCCCTTACATATCACTCTGGCCCCATCAGAGAGCCGTACATTTG
ACCAGACAGATCCATACCTAGTACGTCCTCTTCTAGTACCTGATGAACTA
GAGCTAACTTACTCAGATCTCCTGTCCTCGCATATCATACTTACCATCGC
TTCTCCCGAGGCTGAGAGCTTTTTTCGCTTCCTCCTTAATTGACCCCAGT
TCCCGCCCGCACGAAGGCTGGTTCTCCTTCGAGGGCGTTCCGTTGAAATG
GCACTACCCAGTTGGCCTCCTTTATGACCTTTATGCGGGAGCAGATCCTG
CCTCTAAAGGAGGTGCTGAAACTGACTTGTTATCCACAACGGATGAAGAC
CCGTTACCATGGCGTCTAGTCGTGCATTTCAGCGACTGGCCTGATGAAGA
GCTCGTCCGACTTGATGCAGAAGGGATAGTGATGCACGATGCTTTTATCA
ATAGTGTCAAAGAAGCAGATTTCCTGAGGAATGGTACCGCCAAAGGAATC
ATGACCCTTTCCAGGGAGGATTCGGCGGGGCTTTGGGAGTCAGTGAGAGA
TGGTACGTTATTCCATTTACATGGACTTGAACAAAGAGGGAAGTGCTAAC
CACGCACCCAGTGGACCTTCCAAACTTCCAGCGAATATCCAACATTCTCC
TACCACCCCAGTCACAACCGTTCCGCAACATTCCTGTCCGGTTCTTTCTC
CCCCTCCCCCCAGACTCAGACTCGCCCTCTCTCAAAGTAGTCCAGTCTCC
TATTCCACCAACCATTCAACCAACTCCCGGAAACAGCGCCAGTGTCATGG
CAAGCCAATCCATATTGAGTACGTCCAGGGGTCCTCAACCACAGACCATA
GGGTCAGCACTACACTCACTACTACCACATCTATTTCCAAGTCGAAGGAC
ACCTGTCCTGGCGAAACCAGTACTGCATGGTGCCGCTGTGCCCATGGGGG
CACCACTAGACGAAGTAGTGAGGTGTTCAGGATATGGCGATGGGTGGCTT
TACATTGTGATCAGAATGATGGGTTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000009.1:2190260..2191336+

>ASPNIDRAFT_39638-T1 ID=ASPNIDRAFT_39638-T1|Name=ASPNIDRAFT_39638-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2916bp|location=Sequence derived from alignment at ACJE01000009.1:2190260..2191336+ (Aspergillus niger ATCC 1015)
ATGGAATCGAAAGCCACTCTGGGAAGTATCCAGAAAGCCGTCTGGGCCGG
AAAGCTGCCCTTACATATCACTCTGGCCCCATCAGAGAGCCGTACATTTG
ACCAGACAGATCCATACCTAATCTCCTGTCCTCGCATATCATACTTACCA
TCGCTTCTCCCGAGGCTGAGAGCTTTTTTCGCTTCCTCCTTAATTGACCC
CAGTTCCCGCCCGCACGAAGGCTGGTTCTCCTTCGAGGGCGTTCCGTTGA
AATGGCACTACCCAGTTGGCCTCCTTTATGACCTTTATGCGGGAGCAGAT
CCTGCCTCTAAAGGAGGTGCTGAAACTGACTTGTTATCCACAACGGATGA
AGACCCGTTACCATGGCGTCTAGTCGTGCATTTCAGCGACTGGCCTGATG
AAGAGCTCGTCCGACTTGATGCAGAAGGGATAGTGATGCACGATGCTTTT
ATCAATAGTGTCAAAGAAGCAGATTTCCTGAGGAATGGTACCGCCAAAGG
AATCATGACCCTTTCCAGGGAGGATTCGGCGGGGCTTTGGGAGTCAGTGA
GAGATGTGGACCTTCCAAACTTCCAGCGAATATCCAACATTCTCCTACCA
CCCCAGTCACAACCGTTCCGCAACATTCCTGTCCGGTTCTTTCTCCCCCT
CCCCCCAGACTCAGACTCGCCCTCTCTCAAAGTAGTCCAGTCTCCTATTC
CACCAACCATTCAACCAACTCCCGGAAACAGCGCCAGTGTCATGGCAAGC
CAATCCATATTGAGTACGTCCAGGGGTCCTCAACCACAGACCATAGGGTC
AGCACTACACTCACTACTACCACATCTATTTCCAAGTCGAAGGACACCTG
TCCTGGCGAAACCAGTACTGCATGGTGCCGCTGTGCCCATGGGGGCACCA
CTAGACGAAGTAGTGAGGTGTTCAGGATATGGCGATGGGTGGCTTTACAT
TGTGATCAGAATGATGGGTTAAATGGAATCGAAAGCCACTCTGGGAAGTA
TCCAGAAAGCCGTCTGGGCCGGAAAGCTGCCCTTACATATCACTCTGGCC
CCATCAGAGAGCCGTACATTTGACCAGACAGATCCATACCTAATCTCCTG
TCCTCGCATATCATACTTACCATCGCTTCTCCCGAGGCTGAGAGCTTTTT
TCGCTTCCTCCTTAATTGACCCCAGTTCCCGCCCGCACGAAGGCTGGTTC
TCCTTCGAGGGCGTTCCGTTGAAATGGCACTACCCAGTTGGCCTCCTTTA
TGACCTTTATGCGGGAGCAGATCCTGCCTCTAAAGGAGGTGCTGAAACTG
ACTTGTTATCCACAACGGATGAAGACCCGTTACCATGGCGTCTAGTCGTG
CATTTCAGCGACTGGCCTGATGAAGAGCTCGTCCGACTTGATGCAGAAGG
GATAGTGATGCACGATGCTTTTATCAATAGTGTCAAAGAAGCAGATTTCC
TGAGGAATGGTACCGCCAAAGGAATCATGACCCTTTCCAGGGAGGATTCG
GCGGGGCTTTGGGAGTCAGTGAGAGATGTGGACCTTCCAAACTTCCAGCG
AATATCCAACATTCTCCTACCACCCCAGTCACAACCGTTCCGCAACATTC
CTGTCCGGTTCTTTCTCCCCCTCCCCCCAGACTCAGACTCGCCCTCTCTC
AAAGTAGTCCAGTCTCCTATTCCACCAACCATTCAACCAACTCCCGGAAA
CAGCGCCAGTGTCATGGCAAGCCAATCCATATTGAGTACGTCCAGGGGTC
CTCAACCACAGACCATAGGGTCAGCACTACACTCACTACTACCACATCTA
TTTCCAAGTCGAAGGACACCTGTCCTGGCGAAACCAGTACTGCATGGTGC
CGCTGTGCCCATGGGGGCACCACTAGACGAAGTAGTGAGGTGTTCAGGAT
ATGGCGATGGGTGGCTTTACATTGTGATCAGAATGATGGGTTAAATGGAA
TCGAAAGCCACTCTGGGAAGTATCCAGAAAGCCGTCTGGGCCGGAAAGCT
GCCCTTACATATCACTCTGGCCCCATCAGAGAGCCGTACATTTGACCAGA
CAGATCCATACCTAATCTCCTGTCCTCGCATATCATACTTACCATCGCTT
CTCCCGAGGCTGAGAGCTTTTTTCGCTTCCTCCTTAATTGACCCCAGTTC
CCGCCCGCACGAAGGCTGGTTCTCCTTCGAGGGCGTTCCGTTGAAATGGC
ACTACCCAGTTGGCCTCCTTTATGACCTTTATGCGGGAGCAGATCCTGCC
TCTAAAGGAGGTGCTGAAACTGACTTGTTATCCACAACGGATGAAGACCC
GTTACCATGGCGTCTAGTCGTGCATTTCAGCGACTGGCCTGATGAAGAGC
TCGTCCGACTTGATGCAGAAGGGATAGTGATGCACGATGCTTTTATCAAT
AGTGTCAAAGAAGCAGATTTCCTGAGGAATGGTACCGCCAAAGGAATCAT
GACCCTTTCCAGGGAGGATTCGGCGGGGCTTTGGGAGTCAGTGAGAGATG
TGGACCTTCCAAACTTCCAGCGAATATCCAACATTCTCCTACCACCCCAG
TCACAACCGTTCCGCAACATTCCTGTCCGGTTCTTTCTCCCCCTCCCCCC
AGACTCAGACTCGCCCTCTCTCAAAGTAGTCCAGTCTCCTATTCCACCAA
CCATTCAACCAACTCCCGGAAACAGCGCCAGTGTCATGGCAAGCCAATCC
ATATTGAGTACGTCCAGGGGTCCTCAACCACAGACCATAGGGTCAGCACT
ACACTCACTACTACCACATCTATTTCCAAGTCGAAGGACACCTGTCCTGG
CGAAACCAGTACTGCATGGTGCCGCTGTGCCCATGGGGGCACCACTAGAC
GAAGTAGTGAGGTGTTCAGGATATGGCGATGGGTGGCTTTACATTGTGAT
CAGAATGATGGGTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006914autophagy
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG5ASPNIDRAFT_39638Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39638-T1.exon1ASPNIDRAFT_39638-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_39638-T1.exon2ASPNIDRAFT_39638-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_39638-T1.exon3ASPNIDRAFT_39638-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39638-T1.cdsASPNIDRAFT_39638-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39638-T1ASPNIDRAFT_39638-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR042526
DBxrefInterPro:IPR042527
DBxrefInterPro:IPR007239
DBxrefPFAM:PF04106
Productautophagy protein 5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:2190260..2191336 +
Powered by Drupal