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ASPNIDRAFT_39718-T1, ASPNIDRAFT_39718-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_39718-T1
Unique NameASPNIDRAFT_39718-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:1893529..1894983-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_39718-T1 ID=ASPNIDRAFT_39718-T1|Name=ASPNIDRAFT_39718-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1455bp|location=Sequence derived from alignment at ACJE01000009.1:1893529..1894983- (Aspergillus niger ATCC 1015)
ATGGCCCGCTCCGCCATTGTCCAAGAATACGCCCCTCCGTCCTCCGCACC
CACCTTCTCCGTCGACCGCAAAGTCACCCACGAGCGCCAACAAAATGGCA
TTTCTCGCCCCAATGGATATCGCGTCTCCTGGCATGCCAATCCCGCCGTC
GAACCACACCACTTTGGCCAGTCCCATCCCATGAAGCCATGGCGTCTGAC
CCTCACAAAACAGCTGGTCATGGCCTACGGCATGCACCATGCGATGGACC
TCTACCTGGCGCGCGCAGCCACCTACGAAGAGCTGGCGGACTTCCACAAA
TCAGATTACCTCGATTTCCTACAGCAAGTCGTCCCCGGCGATATGGAGAA
TCCTGAACAGAGCGAGAACATCGCGCGCTTCAACTTCGGTGACGATTGCC
CCATCTTCGACGGCCTCTACAACTACTGCTCCCTCTACGCCGGCGGTACC
ATCGACGCAGCCCGAAAGCTCTGCAACAACCAGTCGGAGATCGCAGTCAA
CTGGTCTGGTGGCCTACATCACGCCAAAAAAGCCGAAGCCAGCGGTTTCT
GCTACATCAACGACATCGTCCTCGGCATCCTGCAGCTCCTCCGCCTGCAC
CCGCGCGTCATGTACATCGACATCGACGTCCACCACGGCGACGGCGTGGA
ACAAGCCTTCTGGTCCACCGACCGCGTCCTCACCGTCTCCTTCCACAAAT
ACGACAAGGACAACTTCTTCCCCGGCACCGGTGGCCTCGACAGCACGGGG
CCCACCCATCCCCTCAACCCGGGCGCCCACCACTCCGTCAACGTCCCCCT
CCACGACGGCATCGACGACGAATCCTACATCCAACTCTTCCGCGACGTCG
TCGGCTCCTGCGTCGAAGTCTACCGACCGGGCGCCATCGTCCTCCAATGC
GGTGCCGACTCCCTCGGCTGCGACCGTCTCGGCTGCTTCAACCTGAACGT
CGCCGCCCACGGCGCCTGCGTCGCCTTCGTCAAAACTTTTAACCTCCCTC
TCCTCGTCGTCGGTGGCGGTGGCTACACCCCACGCAACGTCTCCCGCGCC
TGGGCTCACGAAACCTCCATCCTCATCGACGCCCAGGATACCATCGACCC
TCACATCCCCGAAACCGTCACCTTCCGCAACCACTTCGGCCCTGACTTCT
CTCTCTTCCCGCCCCTCTCGGAAATGCGCAAGCTCGAAAACAAGAACCCT
CGCACTTATCTCGCCGGCTTGCTCCAGTCCATCCGCGAACAGCTTCGATA
CATCCAAGGTGCCCCGAGCGTGCAAATGAGCTTCATTCCTCCGGATATTC
TCGGTCTTCGCGAAGACACGGAGAAGGAAATCGAAGAAGAGACAGCCATG
ATGGAGGAGGAGCGCGAGGAACGATCTGGTGGTGGTAGTTTAGGGAAGTC
GAGTCGACGGAGGGATTTGGAGAGAGGTGCTGGGCAGCGGGGGGAGCTGT
TTTAA
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Coding sequence (CDS) from alignment at ACJE01000009.1:1893529..1894983-

>ASPNIDRAFT_39718-T1 ID=ASPNIDRAFT_39718-T1|Name=ASPNIDRAFT_39718-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1455bp|location=Sequence derived from alignment at ACJE01000009.1:1893529..1894983- (Aspergillus niger ATCC 1015)
ATGGCCCGCTCCGCCATTGTCCAAGAATACGCCCCTCCGTCCTCCGCACC
CACCTTCTCCGTCGACCGCAAAGTCACCCACGAGCGCCAACAAAATGGCA
TTTCTCGCCCCAATGGATATCGCGTCTCCTGGCATGCCAATCCCGCCGTC
GAACCACACCACTTTGGCCAGTCCCATCCCATGAAGCCATGGCGTCTGAC
CCTCACAAAACAGCTGGTCATGGCCTACGGCATGCACCATGCGATGGACC
TCTACCTGGCGCGCGCAGCCACCTACGAAGAGCTGGCGGACTTCCACAAA
TCAGATTACCTCGATTTCCTACAGCAAGTCGTCCCCGGCGATATGGAGAA
TCCTGAACAGAGCGAGAACATCGCGCGCTTCAACTTCGGTGACGATTGCC
CCATCTTCGACGGCCTCTACAACTACTGCTCCCTCTACGCCGGCGGTACC
ATCGACGCAGCCCGAAAGCTCTGCAACAACCAGTCGGAGATCGCAGTCAA
CTGGTCTGGTGGCCTACATCACGCCAAAAAAGCCGAAGCCAGCGGTTTCT
GCTACATCAACGACATCGTCCTCGGCATCCTGCAGCTCCTCCGCCTGCAC
CCGCGCGTCATGTACATCGACATCGACGTCCACCACGGCGACGGCGTGGA
ACAAGCCTTCTGGTCCACCGACCGCGTCCTCACCGTCTCCTTCCACAAAT
ACGACAAGGACAACTTCTTCCCCGGCACCGGTGGCCTCGACAGCACGGGG
CCCACCCATCCCCTCAACCCGGGCGCCCACCACTCCGTCAACGTCCCCCT
CCACGACGGCATCGACGACGAATCCTACATCCAACTCTTCCGCGACGTCG
TCGGCTCCTGCGTCGAAGTCTACCGACCGGGCGCCATCGTCCTCCAATGC
GGTGCCGACTCCCTCGGCTGCGACCGTCTCGGCTGCTTCAACCTGAACGT
CGCCGCCCACGGCGCCTGCGTCGCCTTCGTCAAAACTTTTAACCTCCCTC
TCCTCGTCGTCGGTGGCGGTGGCTACACCCCACGCAACGTCTCCCGCGCC
TGGGCTCACGAAACCTCCATCCTCATCGACGCCCAGGATACCATCGACCC
TCACATCCCCGAAACCGTCACCTTCCGCAACCACTTCGGCCCTGACTTCT
CTCTCTTCCCGCCCCTCTCGGAAATGCGCAAGCTCGAAAACAAGAACCCT
CGCACTTATCTCGCCGGCTTGCTCCAGTCCATCCGCGAACAGCTTCGATA
CATCCAAGGTGCCCCGAGCGTGCAAATGAGCTTCATTCCTCCGGATATTC
TCGGTCTTCGCGAAGACACGGAGAAGGAAATCGAAGAAGAGACAGCCATG
ATGGAGGAGGAGCGCGAGGAACGATCTGGTGGTGGTAGTTTAGGGAAGTC
GAGTCGACGGAGGGATTTGGAGAGAGGTGCTGGGCAGCGGGGGGAGCTGT
TTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016575histone deacetylation
Vocabulary: Molecular Function
TermDefinition
GO:0004407histone deacetylase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39718ASPNIDRAFT_39718Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39718-T1.cdsASPNIDRAFT_39718-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39718-T1.exon1ASPNIDRAFT_39718-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_39718-T1ASPNIDRAFT_39718-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR023696
DBxrefInterPro:IPR037138
DBxrefInterPro:IPR023801
DBxrefInterPro:IPR003084
DBxrefInterPro:IPR000286
DBxrefPFAM:PF00850
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:1893529..1894983 -
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