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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000009.1:1423340..1424082- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_39857-T1 ID=ASPNIDRAFT_39857-T1|Name=ASPNIDRAFT_39857-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=743bp|location=Sequence derived from alignment at ACJE01000009.1:1423340..1424082- (Aspergillus niger ATCC 1015)
ATGACACCTGCTCCATTAACCAAAACACTCGAATTCGAGAAAAAGAACCA
GAACATGCCAAAACTCCCCAAACGTTAGCTTTCCTTCCTCCGCCTCTTTT
CACGCGACAACCCCCACTAACCCTGCTACGCAATGTAGATGTGAAAGTCC
AAAAGCGCCCGATCCCACATCCATCCACTCCCTCCCCATACTCAGGCTCC
TCGTCACCCAAAACCATCTACGTTTCATCCAGCTCCCCCACAATGGGCGT
TGTCAAGCGCGTCCAGAAGTACCTTCGGGCGGCGGAGAACCGCGCCACGG
CAAAACTGCTCAGCGGAAATAACAAAGGAAAGAAGGGCGATCGAAGGAAT
CAGTTCGCGCAGTTGGCGCAAAGTAACGAGGCGTTGAAGAAGGAGGAGGT
GTTTGTGAAGGCCACGGGGCGGGCGATGGAGAGGGCATTGAAGGTGGGGA
AGTGGTTTGAGGCGAGGGGAGAGGATTATACTGTGAGCGTGAAGACGGGG
AGTGTCCTTGTGGTTGACGATGTGGTGGAGGATGAAGAAGAGAGGGAGAA
GGCGGTAGAGGAGAGCGAGAGGATGAAAAAGGAGGTTGAGGAAGCAAAGC
TGAAGGGTGAGAATGCGGAGTTATCCAAGTCGGCGATGCGGAAGAGAAAG
AGGGCTGTTGCGCGGTTGGAGGGCGAACAGGAGCTGCCGGAGACGAGGAC
GAGGTGGGTGAATATGGTGGAGGTGGCAGTTTCATTGAAGTGA back to topCoding sequence (CDS) from alignment at ACJE01000009.1:1423340..1424082- >ASPNIDRAFT_39857-T1 ID=ASPNIDRAFT_39857-T1|Name=ASPNIDRAFT_39857-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1356bp|location=Sequence derived from alignment at ACJE01000009.1:1423340..1424082- (Aspergillus niger ATCC 1015)
ATGTGAAAGTCCAAAAGCGCCCGATCCCACATCCATCCACTCCCTCCCCA
TACTCAGGCTCCTCGTCACCCAAAACCATCTACGTTTCATCCAGCTCCCC
CACAATGGGCGTTGTCAAGCGCGTCCAGAAGTACCTTCGGGCGGCGGAGA
ACCGCGCCACGGCAAAACTGCTCAGCGGAAATAACAAAGGAAAGAAGGGC
GATCGAAGGAATCAGTTCGCGCAGTTGGCGCAAAGTAACGAGGCGTTGAA
GAAGGAGGAGGTGTTTGTGAAGGCCACGGGGCGGGCGATGGAGAGGGCAT
TGAAGGTGGGGAAGTGGTTTGAGGCGAGGGGAGAGGATTATACTGTGAGC
GTGAAGACGGGGAGTGTCCTTGTGGTTGACGATGTGGTGGAGGATGAAGA
AGAGAGGGAGAAGGCGGTAGAGGAGAGCGAGAGGATGAAAAAGGAGGTTG
AGGAAGCAAAGCTGAAGGGTGAGAATGCGGAGTTATCCAAGTCGGCGATG
CGGAAGAGAAAGAGGGCTGTTGCGCGGTTGGAGGGCGAACAGGAGCTGCC
GGAGACGAGGACGAGGTGGGTGAATATGGTGGAGGTGGCAGTTTCATTGA
AGTGAATGACACCTGCTCCATTAACCAAAACACTCGAATTCGAGAAAAAG
AACCAGAACATGCCAAAACTCCCCAAACATGTGAAAGTCCAAAAGCGCCC
GATCCCACATCCATCCACTCCCTCCCCATACTCAGGCTCCTCGTCACCCA
AAACCATCTACGTTTCATCCAGCTCCCCCACAATGGGCGTTGTCAAGCGC
GTCCAGAAGTACCTTCGGGCGGCGGAGAACCGCGCCACGGCAAAACTGCT
CAGCGGAAATAACAAAGGAAAGAAGGGCGATCGAAGGAATCAGTTCGCGC
AGTTGGCGCAAAGTAACGAGGCGTTGAAGAAGGAGGAGGTGTTTGTGAAG
GCCACGGGGCGGGCGATGGAGAGGGCATTGAAGGTGGGGAAGTGGTTTGA
GGCGAGGGGAGAGGATTATACTGTGAGCGTGAAGACGGGGAGTGTCCTTG
TGGTTGACGATGTGGTGGAGGATGAAGAAGAGAGGGAGAAGGCGGTAGAG
GAGAGCGAGAGGATGAAAAAGGAGGTTGAGGAAGCAAAGCTGAAGGGTGA
GAATGCGGAGTTATCCAAGTCGGCGATGCGGAAGAGAAAGAGGGCTGTTG
CGCGGTTGGAGGGCGAACAGGAGCTGCCGGAGACGAGGACGAGGTGGGTG
AATATGGTGGAGGTGGCAGTTTCATTGAAGTGAATGACACCTGCTCCATT
AACCAAAACACTCGAATTCGAGAAAAAGAACCAGAACATGCCAAAACTCC
CCAAAC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008033 | tRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004526 | ribonuclease P activity |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR014612 |
| DBxref | InterPro:IPR036882 |
| DBxref | PFAM:PF12328 |
| DBxref | PFAM:PF01918 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000009.1 | supercontig | ACJE01000009.1:1423340..1424082 - |
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