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ASPNIDRAFT_40173-T1, ASPNIDRAFT_40173-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40173-T1
Unique NameASPNIDRAFT_40173-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:326255..326670-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40173-T1 ID=ASPNIDRAFT_40173-T1|Name=ASPNIDRAFT_40173-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=416bp|location=Sequence derived from alignment at ACJE01000009.1:326255..326670- (Aspergillus niger ATCC 1015)
ATGACCGGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCC
GATTCATTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCT
GGCTTTACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGTAAAT
GGATTTCTGGCGACTTGGTTGCGTGACATTTGACTAATCGACTCGTGTAG
GGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCG
CATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGGTATGCGGC
AGTTCAAGCTCTTGTTCATTCCCCTGGGCGCTGCAATACTGATTATATTC
TTGAACAACCTAGGCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTAT
TCAAGCCGTGCAGTGA
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Coding sequence (CDS) from alignment at ACJE01000009.1:326255..326670-

>ASPNIDRAFT_40173-T1 ID=ASPNIDRAFT_40173-T1|Name=ASPNIDRAFT_40173-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=864bp|location=Sequence derived from alignment at ACJE01000009.1:326255..326670- (Aspergillus niger ATCC 1015)
GCCAAATACTGCTCAAGGGCGATAACGTGTCTCTTATTCAAGCCGTGCAG
TGAGGTTTTGACGAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGT
TCGCATGGCTACAAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGATGACC
GGTCGTGGAGGCGGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCA
TTTCATCTTCAAGCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTT
ACGAGCAGCTTGCTTTCCGCATAGAGGGAAAAATCAGGGCCAAATACTGC
TCAAGGGCGATAACGTGTCTCTTATTCAAGCCGTGCAGTGAGGTTTTGAC
GAGTTCATGAACCTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTAC
AAAGTCCGAAGAAGAGAAGCGGAGACCTCTAGATGACCGGTCGTGGAGGC
GGTGGAGCCGCTCGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAA
GCTCCTTCAGCAACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTG
CTTTCCGCATAGAGGGAAAAATCAGGGCCAAATACTGCTCAAGGGCGATA
ACGTGTCTCTTATTCAAGCCGTGCAGTGAGGTTTTGACGAGTTCATGAAC
CTTGTCATTGACGATGCAGTGGAGGTTCGCATGGCTACAAAGTCCGAAGA
AGAGAAGCGGAGACCTCTAGATGACCGGTCGTGGAGGCGGTGGAGCCGCT
CGCAAGACCCTGCTTGCGCCGATTCATTTCATCTTCAAGCTCCTTCAGCA
ACGGTCTACAGTCTCTATCTGGCTTTACGAGCAGCTTGCTTTCCGCATAG
AGGGAAAAATCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40173ASPNIDRAFT_40173Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40173-T1ASPNIDRAFT_40173-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40173-T1.cdsASPNIDRAFT_40173-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40173-T1.exon3ASPNIDRAFT_40173-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40173-T1.exon2ASPNIDRAFT_40173-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40173-T1.exon1ASPNIDRAFT_40173-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09265NHW
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR027078
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:326255..326670 -
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