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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000009.1:228683..229461+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_40206-T1 ID=ASPNIDRAFT_40206-T1|Name=ASPNIDRAFT_40206-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=779bp|location=Sequence derived from alignment at ACJE01000009.1:228683..229461+ (Aspergillus niger ATCC 1015)
ATGTCTTCTCCCAAGATCGTCCTCTACACCAACCGCACCTGCCCTTGGGC
TCACCGCGCCCACATTGTTCTCCAGGAGCTCGGTCTCCCCTTCCAAGAGG
TCACCATTGATTTGGATACCCCACGCGAGCCATGGTATCTGGAAGTTAAC
CCGGTATGTCCGACCTACCTATCCACCTTCCACAAAGCTTAGCTAACCAA
CGTTCACAATCAAAGCGTGGTCTCGTTCCCTCCCTCTCCTACAATGGTGA
AGTGATCACCGAATCCGGCATCGTCGCTCAATTCCTCGCCGACGCGTACC
CCTCCCACCTCGTGCCCCCGTCAAACACTCCCGAGGGAGCTCTGCAGCGC
GCCCGCATCGCCTTCTTTGTCGACACTTACTCCAGCAAAGCTGCCCCCCA
CTACAATGCCGCCCTGCGTGGTGCTACCGAAGCCGACCGGAAGGCCGGCG
TTGAGAGCTACGTAGCTGCTATCAAGAAGGAGATCGAGCCCCTCCTGTAC
CAGGGACTGGAGGGAAAGCAGCACGGTCCTTTCTTCGGTGGTAGCGATAA
ATTGACTTTGGTGGAGGTGCTGCTCGGATCGTTCCTGATCCGTCTGCACG
CCTTCGCGGACAAGGAGGCTGACTTGATCGACCCGGCCATCTGGGAGGGA
TTGGCGGAGGCGAAGAACTTCAGCCGTTGGGCGCAGGCGACTCGGGAGCA
TCCTAGCGTCAATGGTATCTTTGATGCTAAGGCATGTGCTGACAGGACGA
AGAAGAAGCTCTTGGCGAACAGGAAGTAG back to topCoding sequence (CDS) from alignment at ACJE01000009.1:228683..229461+ >ASPNIDRAFT_40206-T1 ID=ASPNIDRAFT_40206-T1|Name=ASPNIDRAFT_40206-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1434bp|location=Sequence derived from alignment at ACJE01000009.1:228683..229461+ (Aspergillus niger ATCC 1015)
ATGTCTTCTCCCAAGATCGTCCTCTACACCAACCGCACCTGCCCTTGGGC
TCACCGCGCCCACATTGTTCTCCAGGAGCTCGGTCTCCCCTTCCAAGAGG
TCACCATTGATTTGGATACCCCACGCGAGCCATGGTATCTGGAAGTTAAC
CCGCGTGGTCTCGTTCCCTCCCTCTCCTACAATGGTGAAGTGATCACCGA
ATCCGGCATCGTCGCTCAATTCCTCGCCGACGCGTACCCCTCCCACCTCG
TGCCCCCGTCAAACACTCCCGAGGGAGCTCTGCAGCGCGCCCGCATCGCC
TTCTTTGTCGACACTTACTCCAGCAAAGCTGCCCCCCACTACAATGCCGC
CCTGCGTGGTGCTACCGAAGCCGACCGGAAGGCCGGCGTTGAGAGCTACG
TAGCTGCTATCAAGAAGGAGATCGAGCCCCTCCTGTACCAGGGACTGGAG
GGAAAGCAGCACGGTCCTTTCTTCGGTGGTAGCGATAAATTGACTTTGGT
GGAGGTGCTGCTCGGATCGTTCCTGATCCGTCTGCACGCCTTCGCGGACA
AGGAGGCTGACTTGATCGACCCGGCCATCTGGGAGGGATTGGCGGAGGCG
AAGAACTTCAGCCGTTGGGCGCAGGCGACTCGGGAGCATCCTAGCGTCAA
TGGTATCTTTGATGCTAAGGCATGTGCTGACAGGACGAAGAAGAAGCTCT
TGGCGAACAGGAAGTAGATGTCTTCTCCCAAGATCGTCCTCTACACCAAC
CGCACCTGCCCTTGGGCTCACCGCGCCCACATTGTTCTCCAGGAGCTCGG
TCTCCCCTTCCAAGAGGTCACCATTGATTTGGATACCCCACGCGAGCCAT
GGTATCTGGAAGTTAACCCGCGTGGTCTCGTTCCCTCCCTCTCCTACAAT
GGTGAAGTGATCACCGAATCCGGCATCGTCGCTCAATTCCTCGCCGACGC
GTACCCCTCCCACCTCGTGCCCCCGTCAAACACTCCCGAGGGAGCTCTGC
AGCGCGCCCGCATCGCCTTCTTTGTCGACACTTACTCCAGCAAAGCTGCC
CCCCACTACAATGCCGCCCTGCGTGGTGCTACCGAAGCCGACCGGAAGGC
CGGCGTTGAGAGCTACGTAGCTGCTATCAAGAAGGAGATCGAGCCCCTCC
TGTACCAGGGACTGGAGGGAAAGCAGCACGGTCCTTTCTTCGGTGGTAGC
GATAAATTGACTTTGGTGGAGGTGCTGCTCGGATCGTTCCTGATCCGTCT
GCACGCCTTCGCGGACAAGGAGGCTGACTTGATCGACCCGGCCATCTGGG
AGGGATTGGCGGAGGCGAAGAACTTCAGCCGTTGGGCGCAGGCGACTCGG
GAGCATCCTAGCGTCAATGGTATCTTTGATGCTAAGGCATGTGCTGACAG
GACGAAGAAGAAGCTCTTGGCGAACAGGAAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR036282 |
| DBxref | InterPro:IPR010987 |
| DBxref | InterPro:IPR040079 |
| DBxref | InterPro:IPR004045 |
| DBxref | PFAM:PF13417 |
| DBxref | PFAM:PF13409 |
| DBxref | PFAM:PF02798 |
| DBxref | PFAM:PF00462 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000009.1 | supercontig | ACJE01000009.1:228683..229461 + |
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