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ASPNIDRAFT_40237-T1, ASPNIDRAFT_40237-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40237-T1
Unique NameASPNIDRAFT_40237-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:152757..153959-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40237-T1 ID=ASPNIDRAFT_40237-T1|Name=ASPNIDRAFT_40237-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1203bp|location=Sequence derived from alignment at ACJE01000009.1:152757..153959- (Aspergillus niger ATCC 1015)
ATGCGCCATGCTTCTACTAGCGCCACGAAAAAGGCTGGCCCCCTCGCCGG
CATCACTGTCGTCAGTCTGGAACAAGCCATAGCCGCTCCCTTCTGTACCC
GCCAACTAGCCGACCTAGGAGCCCGAGTCATCAAAGTCGAACGACCTGGC
GTCGGAGACTTTGCTCGCAATTATGACACCCGCGTTAACGGCCTAGCCTC
CCACTTCGTCTGGACCAACCGGTCTAAAGAGAGTCTCGCCTTGGACCTCA
AAAAGCCGTCCGATCACAGCGTGCTCATGCGCCTGCTCGGCCGCGCCGAT
GTCCTCGTCCAGAACCTCGCTCCCGGCGCCAGTGCTCGACTGGGTTTATC
CTACGATGATCTCAAAGCGGCTCATCCATCCTTGATTGTGTGCAACATCT
CCGGGTATGGTCCTGACGGACCGTACCGCGATAAGAAGGCCTACGATCTG
TTGATCCAGAGCGAGGCTGGCATGCTCTCCGTCACGGGGACGGGAAAAGA
GCCCGCCAAGGTGGGCATCTCCATCGCTGATATTTCCGCTGGTAGCTATG
CCTACTCCAATATCCTGGCGGCGTTGTATCAGCGGGAGAGGGATCCCTCG
AAGCGGGGGTGTAACATTGATATCTCCATGTTGGAGAGCATGGTTGAGTG
GATGGGCTTCCCTATGTATTATACTTATGAGAATGCCCCGGGCCCGACAC
CAGCGGGTGCTTCGCATGCGGCTATCTATCCTTATGGCCCGTTTGAGACG
GGAGATGGAACGGTGATGTTGGGGATCCAGAATGAGCGTGAGTGGGCTAA
GTTCTGTGACATCGTCTTGGGTCAACCCAGTCTTGCTACGAATGAGCGGT
TTGTGAATAACTCGCTGCGCTCGCAGAACCGTGATGAGTTGAAGAAGATA
ATCTGTGACGTCTTCTCGTCGCTTTCGGCGGAGCAGGTGATTGCTCGACT
GGATGCAGCGGCGATTGCTAATGCCAGCGTCAATGATATGCAAGGCGTCT
GGAACCACCCACAGCTCAAGGCTCGGCAGCGATGGACAGATGTTAAGACG
CCCGCAGGAAGTGTGCCGGCTCTGCTACCTCCTGGAATGACCATGGGGGA
TGAGGATACTTATGGGGCGCGCATGGACGCTGTCCCTGATGTGGGTGAGC
ATAACAAGGCTATTCTGGCCGAGTTGGGGCTCGACGAGGGTACGGAGAAA
TAG
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Coding sequence (CDS) from alignment at ACJE01000009.1:152757..153959-

>ASPNIDRAFT_40237-T1 ID=ASPNIDRAFT_40237-T1|Name=ASPNIDRAFT_40237-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1203bp|location=Sequence derived from alignment at ACJE01000009.1:152757..153959- (Aspergillus niger ATCC 1015)
ATGCGCCATGCTTCTACTAGCGCCACGAAAAAGGCTGGCCCCCTCGCCGG
CATCACTGTCGTCAGTCTGGAACAAGCCATAGCCGCTCCCTTCTGTACCC
GCCAACTAGCCGACCTAGGAGCCCGAGTCATCAAAGTCGAACGACCTGGC
GTCGGAGACTTTGCTCGCAATTATGACACCCGCGTTAACGGCCTAGCCTC
CCACTTCGTCTGGACCAACCGGTCTAAAGAGAGTCTCGCCTTGGACCTCA
AAAAGCCGTCCGATCACAGCGTGCTCATGCGCCTGCTCGGCCGCGCCGAT
GTCCTCGTCCAGAACCTCGCTCCCGGCGCCAGTGCTCGACTGGGTTTATC
CTACGATGATCTCAAAGCGGCTCATCCATCCTTGATTGTGTGCAACATCT
CCGGGTATGGTCCTGACGGACCGTACCGCGATAAGAAGGCCTACGATCTG
TTGATCCAGAGCGAGGCTGGCATGCTCTCCGTCACGGGGACGGGAAAAGA
GCCCGCCAAGGTGGGCATCTCCATCGCTGATATTTCCGCTGGTAGCTATG
CCTACTCCAATATCCTGGCGGCGTTGTATCAGCGGGAGAGGGATCCCTCG
AAGCGGGGGTGTAACATTGATATCTCCATGTTGGAGAGCATGGTTGAGTG
GATGGGCTTCCCTATGTATTATACTTATGAGAATGCCCCGGGCCCGACAC
CAGCGGGTGCTTCGCATGCGGCTATCTATCCTTATGGCCCGTTTGAGACG
GGAGATGGAACGGTGATGTTGGGGATCCAGAATGAGCGTGAGTGGGCTAA
GTTCTGTGACATCGTCTTGGGTCAACCCAGTCTTGCTACGAATGAGCGGT
TTGTGAATAACTCGCTGCGCTCGCAGAACCGTGATGAGTTGAAGAAGATA
ATCTGTGACGTCTTCTCGTCGCTTTCGGCGGAGCAGGTGATTGCTCGACT
GGATGCAGCGGCGATTGCTAATGCCAGCGTCAATGATATGCAAGGCGTCT
GGAACCACCCACAGCTCAAGGCTCGGCAGCGATGGACAGATGTTAAGACG
CCCGCAGGAAGTGTGCCGGCTCTGCTACCTCCTGGAATGACCATGGGGGA
TGAGGATACTTATGGGGCGCGCATGGACGCTGTCCCTGATGTGGGTGAGC
ATAACAAGGCTATTCTGGCCGAGTTGGGGCTCGACGAGGGTACGGAGAAA
TAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008410CoA-transferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40237ASPNIDRAFT_40237Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40237-T1.cdsASPNIDRAFT_40237-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40237-T1.exon1ASPNIDRAFT_40237-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40237-T1ASPNIDRAFT_40237-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000091.3
NoteEggNog:ENOG41
NoteSMCOG1189:L-carnitine dehydratase/bile acid-inducible
DBxrefInterPro:IPR023606
DBxrefInterPro:IPR003673
DBxrefPFAM:PF02515
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:152757..153959 -
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