You are here

Home

ASPNIDRAFT_40408-T1, ASPNIDRAFT_40408-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40408-T1
Unique NameASPNIDRAFT_40408-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:391108..392011+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40408-T1 ID=ASPNIDRAFT_40408-T1|Name=ASPNIDRAFT_40408-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=904bp|location=Sequence derived from alignment at ACJE01000008.1:391108..392011+ (Aspergillus niger ATCC 1015)
ATGACGACGATCGTATGCAAACGCCTGGTGCAGCAGCGGGTTGCCCGCGC
GAATTGGGTGGTGGGCGATGGTTGCCGTACCCTCACCACCAGCGCTCCGT
GGCTTGCAGGACACAATCGATGGTCTCAGATCAAACATGACAAGGCCAAA
AATGACAAGGCAAAAAGCAAGGAGCGCCAACTTATTGGCAAGGAAATCAG
CAGTGCAACTCAGAGTATGTACTTGGAAGGCTTTCGACAATCAATCCCCC
GTCATTCTTCGGTATTGATCTCAAGCAGTGTGGGGTCCCGATCCTAAATT
CAATCCGCGCCTTACCCTCGCCCTTTCCAATGCAAAGCGAGCAGGAATTC
CAAAGACTGTGATCGAAGCAGCAGTTGCTCGGGGACAGGGCATAAGTGTC
ACTGGTGAAGCTTTGGAACAGGTCACGGTCGAAGCTATTCTCCCTCATTC
GGTTGCGGCCGTTCTCGAGTGTCTGACCGATCAGAAAGCCCGTGTATTGC
AAGACGTTCGACACGCTATCAAAGATGCCGGGGGCATCGTCACACCTACC
ACATACCTCTTTGAAAAGAAAGGCAGGATCATCTTCGAGAAGAAGGATGG
GGTGGATCCCGACGACTATATAGACCAGGCTATCGAAGCAGGTGCGACGG
ATATCACGGCAGATGAGCAAGGCCGGCTCCTTGTCTTCACAGAGCCTACG
GAAACAAAGAGTGTGGGCGAGACACTTGAGAAAATGATTGGCCTTTCCAT
TGAGGAGTTGGATATCATATGGGATCCCAACCAAGACACAATAGTCGATC
TCAAGGATGAGGCACAGGTTGCGGAAATGGAGGATATCATCAGTGACCTT
CGAGAAGAGCCGAGTCTACGAGATATCTACCTGAACACAGTCCAGCGCTT
CTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:391108..392011+

>ASPNIDRAFT_40408-T1 ID=ASPNIDRAFT_40408-T1|Name=ASPNIDRAFT_40408-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1680bp|location=Sequence derived from alignment at ACJE01000008.1:391108..392011+ (Aspergillus niger ATCC 1015)
ATGACGACGATCGTATGCAAACGCCTGGTGCAGCAGCGGGTTGCCCGCGC
GAATTGGGTGGTGGGCGATGGTTGCCGTACCCTCACCACCAGCGCTCCGT
GGCTTGCAGGACACAATCGATGGTCTCAGATCAAACATGACAAGGCCAAA
AATGACAAGGCAAAAAGCAAGGAGCGCCAACTTATTGGCAAGGAAATCAG
CAGTGCAACTCAGATGTGGGGTCCCGATCCTAAATTCAATCCGCGCCTTA
CCCTCGCCCTTTCCAATGCAAAGCGAGCAGGAATTCCAAAGACTGTGATC
GAAGCAGCAGTTGCTCGGGGACAGGGCATAAGTGTCACTGGTGAAGCTTT
GGAACAGGTCACGGTCGAAGCTATTCTCCCTCATTCGGTTGCGGCCGTTC
TCGAGTGTCTGACCGATCAGAAAGCCCGTGTATTGCAAGACGTTCGACAC
GCTATCAAAGATGCCGGGGGCATCGTCACACCTACCACATACCTCTTTGA
AAAGAAAGGCAGGATCATCTTCGAGAAGAAGGATGGGGTGGATCCCGACG
ACTATATAGACCAGGCTATCGAAGCAGGTGCGACGGATATCACGGCAGAT
GAGCAAGGCCGGCTCCTTGTCTTCACAGAGCCTACGGAAACAAAGAGTGT
GGGCGAGACACTTGAGAAAATGATTGGCCTTTCCATTGAGGAGTTGGATA
TCATATGGGATCCCAACCAAGACACAATAGTCGATCTCAAGGATGAGGCA
CAGGTTGCGGAAATGGAGGATATCATCAGTGACCTTCGAGAAGAGCCGAG
TCTACGAGATATCTACCTGAACACAGTCCAGCGCTTCTGAATGACGACGA
TCGTATGCAAACGCCTGGTGCAGCAGCGGGTTGCCCGCGCGAATTGGGTG
GTGGGCGATGGTTGCCGTACCCTCACCACCAGCGCTCCGTGGCTTGCAGG
ACACAATCGATGGTCTCAGATCAAACATGACAAGGCCAAAAATGACAAGG
CAAAAAGCAAGGAGCGCCAACTTATTGGCAAGGAAATCAGCAGTGCAACT
CAGATGTGGGGTCCCGATCCTAAATTCAATCCGCGCCTTACCCTCGCCCT
TTCCAATGCAAAGCGAGCAGGAATTCCAAAGACTGTGATCGAAGCAGCAG
TTGCTCGGGGACAGGGCATAAGTGTCACTGGTGAAGCTTTGGAACAGGTC
ACGGTCGAAGCTATTCTCCCTCATTCGGTTGCGGCCGTTCTCGAGTGTCT
GACCGATCAGAAAGCCCGTGTATTGCAAGACGTTCGACACGCTATCAAAG
ATGCCGGGGGCATCGTCACACCTACCACATACCTCTTTGAAAAGAAAGGC
AGGATCATCTTCGAGAAGAAGGATGGGGTGGATCCCGACGACTATATAGA
CCAGGCTATCGAAGCAGGTGCGACGGATATCACGGCAGATGAGCAAGGCC
GGCTCCTTGTCTTCACAGAGCCTACGGAAACAAAGAGTGTGGGCGAGACA
CTTGAGAAAATGATTGGCCTTTCCATTGAGGAGTTGGATATCATATGGGA
TCCCAACCAAGACACAATAGTCGATCTCAAGGATGAGGCACAGGTTGCGG
AAATGGAGGATATCATCAGTGACCTTCGAGAAGAGCCGAGTCTACGAGAT
ATCTACCTGAACACAGTCCAGCGCTTCTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40408ASPNIDRAFT_40408Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40408-T1.exon1ASPNIDRAFT_40408-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40408-T1.exon2ASPNIDRAFT_40408-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40408-T1.cdsASPNIDRAFT_40408-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40408-T1ASPNIDRAFT_40408-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR029072
DBxrefInterPro:IPR002876
DBxrefInterPro:IPR017856
DBxrefInterPro:IPR026564
DBxrefPFAM:PF01709
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:391108..392011 +
Powered by Drupal