You are here

ASPNIDRAFT_40551-T1, ASPNIDRAFT_40551-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40551-T1
Unique NameASPNIDRAFT_40551-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:825613..826846+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40551-T1 ID=ASPNIDRAFT_40551-T1|Name=ASPNIDRAFT_40551-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1234bp|location=Sequence derived from alignment at ACJE01000008.1:825613..826846+ (Aspergillus niger ATCC 1015)
ATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGCACGTGGCA GGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGAGTATGACTCATAGC AGAAGAATGCTGCCATCGTGACGTCCGCTTTTGCTGAGAATCATGTGTCG TAAGGTGATACAATGACCAAGCCAACTCCGGCAATGCTCGAGGCTATCTG CCAGACCACACTTCTTGACGATGTCTTCGGTGAAGACCCAGTGACAAATG ATCTTGAAGCTTATGTGGCAGAGCGTACTCAACATGAAAGCGCTCTCTTG GTCATGTCTGGCACAATGGGCAACCAGGTTGCCATCCGCACGCACCTGAA GGAACCGCCTTATTCTGTCTTGTGCGATCATCGGTCTCATATCATCTGTT ACGAGGCTGGTGGAGTAAGCTCCCTCACGGGCGCTACGGTCATGCCCGTC ACCCCGAAGAATGGTGTTCACCTTACTTTGGAGGATATAAAGAAACATGC GGTACTCAGCGATAACATCCACTACTGTCCTACGAAGCTCATCAGTCTTG AGAACACGTTGGATGGGATGGTTATGCCACTTTCTGAGGCTCGGCGTATC ACTGAATGGGCCCATCAAAACAACATCAAGGTCCATCTGGATGGTGCGAG ACTTTGGGAAGCAGTGGTGTCCGGTGCCGGTAGTTTGCCTGACTACACTA CTTTGTTCGATAGCGTAAGCCTATGTTTCTCGAAGGGCTTAGGTGCCCCC ATTGGAAGTATTATTGTTGGCTCGAACGAGTTCATCAAGAAAGCTCGATG GTTTCGCAAATCCATCGGTGGTGGTGTACGTCAAGCTGGAGTCATCTCTG CGGCGGCCCGCGTCGCGGTTGAGGAGACATTTGGACCAGACCCCAATGGA CAGCAAGGGAAGCTTCTAGGGTCTCATCAGAGAGCAAAGAAGGTTGCCGA TATGTGGACTAGCCGTGGAGGCAAGCTATCTCACCCGGTACAGACCAACA TGGTGTGGTTGGACGTCGAGGGGTCGGGCTTGGGGCCTGATGACCTGGCT GAGATCGGACGTGAAAAGGGGTTGAAGCTTGGGGGTAGTCGCATTGTCGT CCACTACCGTAAGTATCCCTTTCCCATGCGAACTACTCTCTCCTAATCAA TCTAACATGACTGCAGAGGTATCCGAAGAGTCCCTCTCTCGACTCGAGCA GGTGTTTGAGGCAGCTATGAACAAGAAAGCTTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:825613..826846+

>ASPNIDRAFT_40551-T1 ID=ASPNIDRAFT_40551-T1|Name=ASPNIDRAFT_40551-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3312bp|location=Sequence derived from alignment at ACJE01000008.1:825613..826846+ (Aspergillus niger ATCC 1015)
ATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGCACGTGGCA
GGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGATACAATGACCAAGC
CAACTCCGGCAATGCTCGAGGCTATCTGCCAGACCACACTTCTTGACGAT
GTCTTCGGTGAAGACCCAGTGACAAATGATCTTGAAGCTTATGTGGCAGA
GCGTACTCAACATGAAAGCGCTCTCTTGGTCATGTCTGGCACAATGGGCA
ACCAGGTTGCCATCCGCACGCACCTGAAGGAACCGCCTTATTCTGTCTTG
TGCGATCATCGGTCTCATATCATCTGTTACGAGGCTGGTGGAGTAAGCTC
CCTCACGGGCGCTACGGTCATGCCCGTCACCCCGAAGAATGGTGTTCACC
TTACTTTGGAGGATATAAAGAAACATGCGGTACTCAGCGATAACATCCAC
TACTGTCCTACGAAGCTCATCAGTCTTGAGAACACGTTGGATGGGATGGT
TATGCCACTTTCTGAGGCTCGGCGTATCACTGAATGGGCCCATCAAAACA
ACATCAAGGTCCATCTGGATGGTGCGAGACTTTGGGAAGCAGTGGTGTCC
GGTGCCGGTAGTTTGCCTGACTACACTACTTTGTTCGATAGCGTAAGCCT
ATGTTTCTCGAAGGGCTTAGGTGCCCCCATTGGAAGTATTATTGTTGGCT
CGAACGAGTTCATCAAGAAAGCTCGATGGTTTCGCAAATCCATCGGTGGT
GGTGTACGTCAAGCTGGAGTCATCTCTGCGGCGGCCCGCGTCGCGGTTGA
GGAGACATTTGGACCAGACCCCAATGGACAGCAAGGGAAGCTTCTAGGGT
CTCATCAGAGAGCAAAGAAGGTTGCCGATATGTGGACTAGCCGTGGAGGC
AAGCTATCTCACCCGGTACAGACCAACATGGTGTGGTTGGACGTCGAGGG
GTCGGGCTTGGGGCCTGATGACCTGGCTGAGATCGGACGTGAAAAGGGGT
TGAAGCTTGGGGGTAGTCGCATTGTCGTCCACTACCAGGTATCCGAAGAG
TCCCTCTCTCGACTCGAGCAGGTGTTTGAGGCAGCTATGAACAAGAAAGC
TTGAATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGCACGT
GGCAGGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGATACAATGACC
AAGCCAACTCCGGCAATGCTCGAGGCTATCTGCCAGACCACACTTCTTGA
CGATGTCTTCGGTGAAGACCCAGTGACAAATGATCTTGAAGCTTATGTGG
CAGAGCGTACTCAACATGAAAGCGCTCTCTTGGTCATGTCTGGCACAATG
GGCAACCAGGTTGCCATCCGCACGCACCTGAAGGAACCGCCTTATTCTGT
CTTGTGCGATCATCGGTCTCATATCATCTGTTACGAGGCTGGTGGAGTAA
GCTCCCTCACGGGCGCTACGGTCATGCCCGTCACCCCGAAGAATGGTGTT
CACCTTACTTTGGAGGATATAAAGAAACATGCGGTACTCAGCGATAACAT
CCACTACTGTCCTACGAAGCTCATCAGTCTTGAGAACACGTTGGATGGGA
TGGTTATGCCACTTTCTGAGGCTCGGCGTATCACTGAATGGGCCCATCAA
AACAACATCAAGGTCCATCTGGATGGTGCGAGACTTTGGGAAGCAGTGGT
GTCCGGTGCCGGTAGTTTGCCTGACTACACTACTTTGTTCGATAGCGTAA
GCCTATGTTTCTCGAAGGGCTTAGGTGCCCCCATTGGAAGTATTATTGTT
GGCTCGAACGAGTTCATCAAGAAAGCTCGATGGTTTCGCAAATCCATCGG
TGGTGGTGTACGTCAAGCTGGAGTCATCTCTGCGGCGGCCCGCGTCGCGG
TTGAGGAGACATTTGGACCAGACCCCAATGGACAGCAAGGGAAGCTTCTA
GGGTCTCATCAGAGAGCAAAGAAGGTTGCCGATATGTGGACTAGCCGTGG
AGGCAAGCTATCTCACCCGGTACAGACCAACATGGTGTGGTTGGACGTCG
AGGGGTCGGGCTTGGGGCCTGATGACCTGGCTGAGATCGGACGTGAAAAG
GGGTTGAAGCTTGGGGGTAGTCGCATTGTCGTCCACTACCAGGTATCCGA
AGAGTCCCTCTCTCGACTCGAGCAGGTGTTTGAGGCAGCTATGAACAAGA
AAGCTTGAATGGCTAGCGTATCAACAGCTTCCAATGGGAGCAGACCCAGC
ACGTGGCAGGGCGCTGGGGCAGCTGAGTTTGACCTGAGAAGTGATACAAT
GACCAAGCCAACTCCGGCAATGCTCGAGGCTATCTGCCAGACCACACTTC
TTGACGATGTCTTCGGTGAAGACCCAGTGACAAATGATCTTGAAGCTTAT
GTGGCAGAGCGTACTCAACATGAAAGCGCTCTCTTGGTCATGTCTGGCAC
AATGGGCAACCAGGTTGCCATCCGCACGCACCTGAAGGAACCGCCTTATT
CTGTCTTGTGCGATCATCGGTCTCATATCATCTGTTACGAGGCTGGTGGA
GTAAGCTCCCTCACGGGCGCTACGGTCATGCCCGTCACCCCGAAGAATGG
TGTTCACCTTACTTTGGAGGATATAAAGAAACATGCGGTACTCAGCGATA
ACATCCACTACTGTCCTACGAAGCTCATCAGTCTTGAGAACACGTTGGAT
GGGATGGTTATGCCACTTTCTGAGGCTCGGCGTATCACTGAATGGGCCCA
TCAAAACAACATCAAGGTCCATCTGGATGGTGCGAGACTTTGGGAAGCAG
TGGTGTCCGGTGCCGGTAGTTTGCCTGACTACACTACTTTGTTCGATAGC
GTAAGCCTATGTTTCTCGAAGGGCTTAGGTGCCCCCATTGGAAGTATTAT
TGTTGGCTCGAACGAGTTCATCAAGAAAGCTCGATGGTTTCGCAAATCCA
TCGGTGGTGGTGTACGTCAAGCTGGAGTCATCTCTGCGGCGGCCCGCGTC
GCGGTTGAGGAGACATTTGGACCAGACCCCAATGGACAGCAAGGGAAGCT
TCTAGGGTCTCATCAGAGAGCAAAGAAGGTTGCCGATATGTGGACTAGCC
GTGGAGGCAAGCTATCTCACCCGGTACAGACCAACATGGTGTGGTTGGAC
GTCGAGGGGTCGGGCTTGGGGCCTGATGACCTGGCTGAGATCGGACGTGA
AAAGGGGTTGAAGCTTGGGGGTAGTCGCATTGTCGTCCACTACCAGGTAT
CCGAAGAGTCCCTCTCTCGACTCGAGCAGGTGTTTGAGGCAGCTATGAAC
AAGAAAGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016829lyase activity
Vocabulary: Biological Process
TermDefinition
GO:0006520cellular amino acid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40551ASPNIDRAFT_40551Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40551-T1.exon1ASPNIDRAFT_40551-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40551-T1.exon2ASPNIDRAFT_40551-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40551-T1.exon3ASPNIDRAFT_40551-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40551-T1.cdsASPNIDRAFT_40551-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40551-T1ASPNIDRAFT_40551-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR023603
DBxrefInterPro:IPR015422
DBxrefInterPro:IPR015421
DBxrefInterPro:IPR001597
DBxrefPFAM:PF01212
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:825613..826846 +