You are here

Home

ASPNIDRAFT_40619-T1, ASPNIDRAFT_40619-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40619-T1
Unique NameASPNIDRAFT_40619-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:14110..15158+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40619-T1 ID=ASPNIDRAFT_40619-T1|Name=ASPNIDRAFT_40619-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1049bp|location=Sequence derived from alignment at ACJE01000001.1:14110..15158+ (Aspergillus niger ATCC 1015)
ATGGCAAGCAACTTGCGTCTGGAAGCGCTCTTCGAGGTTAAAGACCGTTG
GGTCGCCATTACCGGTGCAGGTGAAGTACCATCCAAGGAAAACAACTGGC
TTAATATTGACATCTTGCTATCAGGTAGCGGTATAGGTCGTATGTTAGCA
CGAGGTTGTACAGTGAATGGGGCCAACACCATTCTCATCGATGTCAATGA
GCGTTCTCTGGAGGAGACCAAGACAGAGCTTCAAGAACTCAGCCAATCTG
GGGACTTATCTCCGACCTCTGTAGTTACGTCTGTTCCCCACGCATATCCG
GTCATTACATTATTCTGAGTCAATTCTAGAATACATGGCGACCTTTCCAG
CGAAGCAGGTGTCACAGCGGTCGTCGCCGCAATTAAATCAATACGCGGTT
CACTTGATGCTCTCATACATTGCGCCGCAGTACGCTATATGAACGAGGTT
ACTTATAAGCCTGGTGGCAGTCTGGGTGACCTTGAAGATGCGACTATGTC
TGCCCCCTATCAAGGCTGGGAACAAACCTTTCGCTTGAACGTGCTCGCAC
CATATTATCTGACTGCGGGTTTAGTACGCCTGCTGGGCACAGCAGCCGCG
AAAGGCGATGGTCGAGGCTGCGTGCTAATGTTAAGCAGCCCAGCTAGTGT
GCATAATCATCAATTTGTGCCCTGCTATCAGACGTCTAAAGCAGCGGTTG
ATCACCTTGTACGGATCATGGCCGCTGAGTTCGCAGACTACTACAGTATG
TTGTAGCTCGTAGCTCCACCCATCATTTTTTCTGCGACACTCATCTAGTT
TCATTTACAGTTCGCGTCAACGGGATTTCACCAGGCATTGTGCCTTCCGG
AATGACCACGACAGATGCCAATTCAAATCTCCACCTAGCGGCAGAAGCTC
CAGCGGGCCGAGCAGGGAACGAGGATGACATGGTAGGGACCATGCTGTGG
TTGATCAGCAAGGCGGGCGCTTTTATGGACGGCAAGGTTGTCAGGGTTGA
AGGCGGCCGGCTTCTTATTCTTCGAGGAGCAACGTGTCATTCCGGTTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:14110..15158+

>ASPNIDRAFT_40619-T1 ID=ASPNIDRAFT_40619-T1|Name=ASPNIDRAFT_40619-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2556bp|location=Sequence derived from alignment at ACJE01000001.1:14110..15158+ (Aspergillus niger ATCC 1015)
ATGGCAAGCAACTTGCGTCTGGAAGCGCTCTTCGAGGTTAAAGACCGTTG
GGTCGCCATTACCGGTGCAGGTGAAGTACCATCCAAGGAAAACAACTGGC
TTAATATTGACATCTTGCTATCAGGTAGCGGTATAGGTCGTATGTTAGCA
CGAGGTTGTACAGTGAATGGGGCCAACACCATTCTCATCGATGTCAATGA
GCGTTCTCTGGAGGAGACCAAGACAGAGCTTCAAGAACTCAGCCAATCTG
GGGACTTATCTCCGACCTCTGTAGTTACAATACATGGCGACCTTTCCAGC
GAAGCAGGTGTCACAGCGGTCGTCGCCGCAATTAAATCAATACGCGGTTC
ACTTGATGCTCTCATACATTGCGCCGCAGTACGCTATATGAACGAGGTTA
CTTATAAGCCTGGTGGCAGTCTGGGTGACCTTGAAGATGCGACTATGTCT
GCCCCCTATCAAGGCTGGGAACAAACCTTTCGCTTGAACGTGCTCGCACC
ATATTATCTGACTGCGGGTTTAGTACGCCTGCTGGGCACAGCAGCCGCGA
AAGGCGATGCTCGTAGCTCCACCCATCATTTTTTCTGCGACACTCATCTA
GTTTCATTTACAGTTCGCGTCAACGGGATTTCACCAGGCATTGTGCCTTC
CGGAATGACCACGACAGATGCCAATTCAAATCTCCACCTAGCGGCAGAAG
CTCCAGCGGGCCGAGCAGGGAACGAGGATGACATGGTAGGGACCATGCTG
TGGTTGATCAGCAAGGCGGGCGCTTTTATGGACGGCAAGGTTGTCAGGGT
TGAAGGCGGCCGGCTTCTTATTCTTCGAGGAGCAACGTGTCATTCCGGTT
GAATGGCAAGCAACTTGCGTCTGGAAGCGCTCTTCGAGGTTAAAGACCGT
TGGGTCGCCATTACCGGTGCAGGTGAAGTACCATCCAAGGAAAACAACTG
GCTTAATATTGACATCTTGCTATCAGGTAGCGGTATAGGTCGTATGTTAG
CACGAGGTTGTACAGTGAATGGGGCCAACACCATTCTCATCGATGTCAAT
GAGCGTTCTCTGGAGGAGACCAAGACAGAGCTTCAAGAACTCAGCCAATC
TGGGGACTTATCTCCGACCTCTGTAGTTACAATACATGGCGACCTTTCCA
GCGAAGCAGGTGTCACAGCGGTCGTCGCCGCAATTAAATCAATACGCGGT
TCACTTGATGCTCTCATACATTGCGCCGCAGTACGCTATATGAACGAGGT
TACTTATAAGCCTGGTGGCAGTCTGGGTGACCTTGAAGATGCGACTATGT
CTGCCCCCTATCAAGGCTGGGAACAAACCTTTCGCTTGAACGTGCTCGCA
CCATATTATCTGACTGCGGGTTTAGTACGCCTGCTGGGCACAGCAGCCGC
GAAAGGCGATGCTCGTAGCTCCACCCATCATTTTTTCTGCGACACTCATC
TAGTTTCATTTACAGTTCGCGTCAACGGGATTTCACCAGGCATTGTGCCT
TCCGGAATGACCACGACAGATGCCAATTCAAATCTCCACCTAGCGGCAGA
AGCTCCAGCGGGCCGAGCAGGGAACGAGGATGACATGGTAGGGACCATGC
TGTGGTTGATCAGCAAGGCGGGCGCTTTTATGGACGGCAAGGTTGTCAGG
GTTGAAGGCGGCCGGCTTCTTATTCTTCGAGGAGCAACGTGTCATTCCGG
TTGAATGGCAAGCAACTTGCGTCTGGAAGCGCTCTTCGAGGTTAAAGACC
GTTGGGTCGCCATTACCGGTGCAGGTGAAGTACCATCCAAGGAAAACAAC
TGGCTTAATATTGACATCTTGCTATCAGGTAGCGGTATAGGTCGTATGTT
AGCACGAGGTTGTACAGTGAATGGGGCCAACACCATTCTCATCGATGTCA
ATGAGCGTTCTCTGGAGGAGACCAAGACAGAGCTTCAAGAACTCAGCCAA
TCTGGGGACTTATCTCCGACCTCTGTAGTTACAATACATGGCGACCTTTC
CAGCGAAGCAGGTGTCACAGCGGTCGTCGCCGCAATTAAATCAATACGCG
GTTCACTTGATGCTCTCATACATTGCGCCGCAGTACGCTATATGAACGAG
GTTACTTATAAGCCTGGTGGCAGTCTGGGTGACCTTGAAGATGCGACTAT
GTCTGCCCCCTATCAAGGCTGGGAACAAACCTTTCGCTTGAACGTGCTCG
CACCATATTATCTGACTGCGGGTTTAGTACGCCTGCTGGGCACAGCAGCC
GCGAAAGGCGATGCTCGTAGCTCCACCCATCATTTTTTCTGCGACACTCA
TCTAGTTTCATTTACAGTTCGCGTCAACGGGATTTCACCAGGCATTGTGC
CTTCCGGAATGACCACGACAGATGCCAATTCAAATCTCCACCTAGCGGCA
GAAGCTCCAGCGGGCCGAGCAGGGAACGAGGATGACATGGTAGGGACCAT
GCTGTGGTTGATCAGCAAGGCGGGCGCTTTTATGGACGGCAAGGTTGTCA
GGGTTGAAGGCGGCCGGCTTCTTATTCTTCGAGGAGCAACGTGTCATTCC
GGTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40619ASPNIDRAFT_40619Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40619-T1.exon1ASPNIDRAFT_40619-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40619-T1.exon2ASPNIDRAFT_40619-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40619-T1.exon3ASPNIDRAFT_40619-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40619-T1.cdsASPNIDRAFT_40619-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40619-T1ASPNIDRAFT_40619-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:14110..15158 +
Powered by Drupal