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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000008.1:1137024..1139200+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_40650-T1 ID=ASPNIDRAFT_40650-T1|Name=ASPNIDRAFT_40650-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2177bp|location=Sequence derived from alignment at ACJE01000008.1:1137024..1139200+ (Aspergillus niger ATCC 1015)
ATGCCCGCTCTCAGGCGGAAGAATGGCCGAGAGCCAGCTTGTGAGGCATG
CCGCCGACGCAAACTGGCCTGCGACCACGAAACCCCCGCCTGCCAGCGGT
GTCGGAGACTATCCTTGAAATGCGTCTATCTTGCCAATCCACTCACCAAA
GGCAGAGCGAGAAGCCTGCCTGAGGCTGACTCGCCGACTGTCTTGAGCAA
TGAGAGCGAGGGTGTCCCAAGTACCAAAACCTGCCCGGGAGCCCAGTCAA
CCACGCCCATCCTCGAAAGCTCAGCCGAGTACCTGGGGCCCACGAGTTTT
TCATCTGTATTTGTAGAACATCGGGATCGATTCGAAGTGGATCAGACCCT
GAAAACGCCCACTGGAGGGGGTATCGATGGTGTCGGGGCGCAATCACCCA
CCCAGCCGGGGAACCCTACCATCACGCCGAGAATGCTCCAACTGGGGATA
CAGATCCTACAAAACCTGCCGGATGAACGAACATGTAACTTACTTTTCGT
TCATCCGATGGCTTTGATGGATGCCTGTTTCCGACCAGCTTATCGAGTCG
CGTCTGATAAGATGTGGGATGAGTATCGAGACGTGCTCCGGCTGCGGAAC
AGCGAGCACCTACAGTTTGTTGCGAAGCGGTTTTCAGAGTGCAGTCTAAC
GCCTTTACCGGCTGTACAAGATCCACACCGCTGGATCGAGTCTTTCTCGG
GAAAGAGAACTCGTTGGGAGCTTCTAGGATCCTTGTTCACTTTTTGGTCG
TCTGCAGCCTCACAGTTGCCGGTACAGCACGATATCATCACCCAGTACTG
TCAGCAACATGCGTTCAAGAGACCCAAAGACCTTATGGTGCATCTGAAAC
GGTGTGCGTCCATGTGCATTGAGCTGTGTAGTCAGCTGGGTGCAATTAAT
ATTCTTTTTGTCAATTTGGCGTTCAAACATAACATCCTCGAGAGCATTGC
CAGTGGTGATAAGAGTAAGTCCTAACCCGGAGATATCCAAGCATAGCACA
TAGCACTGATCAACAGGCCTTTCTTGCTGGCGCCAACATGGCGATGTAAT
TGCAGTGACGACATCAATCGGGCTTCACCGGGAATTATCATCTAATTGGA
ACGAGGTTTCATTCCAGCACGAACTCAAGCGACGAGTCTACGCATCGATT
TACAATTTCGACAAGGTCATCTCCACATTTACCGGCAGACCACCGCTCCT
GAACAGAAAGTACTCGACGACCAAGCTGCCGCTGGACATTGACGACGAGG
ATATATTCTCCGGCAGAATTGGCGATGCCGTGGCAAAGCTCAACTCAAAT
GGTTGGGACAGCAGCGAAGACCGACAGCCGTATCCTGCCACCATCTTGCG
GGCGCGAGCAATGCTAGCAAGGAACCGCGAAGAGATGCTAGAAGTTTTAG
AGACTTCGCAGGATAGCATCACAGATGCTGCAGTTCAAACATGCCTGTAT
GACTTCAGCCCAATCTGTATCCCTCGCACTTGCAACTGCTGACAAGCAAA
CAGCCACCTCAAAGCACAAGCTACAGACATCTACGCACAATTCCCCGAAG
TCATCAAGTTTAAAGCAGAACACGTCCACGACCGCGACATGCCCGGCCAG
CTGCTCGCTTTGCGTGTCCTTGTGCGCTTGGATTTTCTGCTCAACCTGTT
CATCTTAGAGCGACTACTGACCCGACACAGGGTGGTTGACGAGCAGGCGC
TAATCCAGGTTAGCCATGAAATGGTAGGATTAACCTTGATATACTGGAAG
CACAAGGACCGGTTCGAGAATCACATTGATTTTTCCTGGCTGGTATGACT
CACAGCCCCCTTTAAATAGATACACCTCATCAATACTGACGCGACATGCT
CAGGCTATGTCCTACGCCGTCCCAGGCAGCGGTATTCTCTGCCTTGAGCT
GCTCCGCCAATCGAGCTCTCCCGAAACGTACACCTTAGAACTTCCCCGAT
CGGACATCATCCAGGACCTCAGTGTACTGGTCGCCTTTCTCGACTGGCTC
CGCCCCTCGGAATCCGACATCGCAGCCAAGGCGCAAATCAAGGGAATATT
GCAACGCTCATTGGACCGAATCCTCAGCATGCCGGCATCGCTGCACAGTC
CGACGAGAGCCCTGGACGCGCTGCCCGACTTTGTAGGCGCAGATCCCCAT
CTCGACTTGTTAAACACATTCGCGTGG back to topCoding sequence (CDS) from alignment at ACJE01000008.1:1137024..1139200+ >ASPNIDRAFT_40650-T1 ID=ASPNIDRAFT_40650-T1|Name=ASPNIDRAFT_40650-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7944bp|location=Sequence derived from alignment at ACJE01000008.1:1137024..1139200+ (Aspergillus niger ATCC 1015)
ATGCCCGCTCTCAGGCGGAAGAATGGCCGAGAGCCAGCTTGTGAGGCATG
CCGCCGACGCAAACTGGCCTGCGACCACGAAACCCCCGCCTGCCAGCGGT
GTCGGAGACTATCCTTGAAATGCGTCTATCTTGCCAATCCACTCACCAAA
GGCAGAGCGAGAAGCCTGCCTGAGGCTGACTCGCCGACTGTCTTGAGCAA
TGAGAGCGAGGGTGTCCCAAGTACCAAAACCTGCCCGGGAGCCCAGTCAA
CCACGCCCATCCTCGAAAGCTCAGCCGAGTACCTGGGGCCCACGAGTTTT
TCATCTGTATTTGTAGAACATCGGGATCGATTCGAAGTGGATCAGACCCT
GAAAACGCCCACTGGAGGGGGTATCGATGGTGTCGGGGCGCAATCACCCA
CCCAGCCGGGGAACCCTACCATCACGCCGAGAATGCTCCAACTGGGGATA
CAGATCCTACAAAACCTGCCGGATGAACGAACATGTAACTTACTTTTCGT
TCATCCGATGGCTTTGATGGATGCCTGTTTCCGACCAGCTTATCGAGTCG
CGTCTGATAAGATGTGGGATGAGTATCGAGACGTGCTCCGGCTGCGGAAC
AGCGAGCACCTACAGTTTGTTGCGAAGCGGTTTTCAGAGTGCAGTCTAAC
GCCTTTACCGGCTGTACAAGATCCACACCGCTGGATCGAGTCTTTCTCGG
GAAAGAGAACTCGTTGGGAGCTTCTAGGATCCTTGTTCACTTTTTGGTCG
TCTGCAGCCTCACAGTTGCCGGTACAGCACGATATCATCACCCAGTACTG
TCAGCAACATGCGTTCAAGAGACCCAAAGACCTTATGGTGCATCTGAAAC
GGTGTGCGTCCATGTGCATTGAGCTGTGTAGTCAGCTGGGTGCAATTAAT
ATTCTTTTTGTCAATTTGGCGTTCAAACATAACATCCTCGAGAGCATTGC
CAGTGGTGATAAGAGCCTTTCTTGCTGGCGCCAACATGGCGATGTAATTG
CAGTGACGACATCAATCGGGCTTCACCGGGAATTATCATCTAATTGGAAC
GAGGTTTCATTCCAGCACGAACTCAAGCGACGAGTCTACGCATCGATTTA
CAATTTCGACAAGGTCATCTCCACATTTACCGGCAGACCACCGCTCCTGA
ACAGAAAGTACTCGACGACCAAGCTGCCGCTGGACATTGACGACGAGGAT
ATATTCTCCGGCAGAATTGGCGATGCCGTGGCAAAGCTCAACTCAAATGG
TTGGGACAGCAGCGAAGACCGACAGCCGTATCCTGCCACCATCTTGCGGG
CGCGAGCAATGCTAGCAAGGAACCGCGAAGAGATGCTAGAAGTTTTAGAG
ACTTCGCAGGATAGCATCACAGATGCTGCAGTTCAAACATGCCTCCACCT
CAAAGCACAAGCTACAGACATCTACGCACAATTCCCCGAAGTCATCAAGT
TTAAAGCAGAACACGTCCACGACCGCGACATGCCCGGCCAGCTGCTCGCT
TTGCGTGTCCTTGTGCGCTTGGATTTTCTGCTCAACCTGTTCATCTTAGA
GCGACTACTGACCCGACACAGGGTGGTTGACGAGCAGGCGCTAATCCAGG
TTAGCCATGAAATGCCCCCTTTAAATAGATACACCTCATCAATACTGACG
CGACATGCTCAGGCTATGTCCTACGCCGTCCCAGGCAGCGGTATTCTCTG
CCTTGAGCTGCTCCGCCAATCGAGCTCTCCCGAAACGTACACCTTAGAAC
TTCCCCGATCGGACATCATCCAGGACCTCAGTGTACTGGTCGCCTTTCTC
GACTGGCTCCGCCCCTCGGAATCCGACATCGCAGCCAAGGCGCAAATCAA
GGGAATATTGCAACGCTCATTGGACCGAATCCTCAGCATGCCGGCATCGC
TGCACAGTCCGACGAGAGCCCTGGACGCGCTGCCCGACTTTGTAGGCGCA
GATCCCCATCTCGACTTGTTAAACACATTCGCGTGGATGCCCGCTCTCAG
GCGGAAGAATGGCCGAGAGCCAGCTTGTGAGGCATGCCGCCGACGCAAAC
TGGCCTGCGACCACGAAACCCCCGCCTGCCAGCGGTGTCGGAGACTATCC
TTGAAATGCGTCTATCTTGCCAATCCACTCACCAAAGGCAGAGCGAGAAG
CCTGCCTGAGGCTGACTCGCCGACTGTCTTGAGCAATGAGAGCGAGGGTG
TCCCAAGTACCAAAACCTGCCCGGGAGCCCAGTCAACCACGCCCATCCTC
GAAAGCTCAGCCGAGTACCTGGGGCCCACGAGTTTTTCATCTGTATTTGT
AGAACATCGGGATCGATTCGAAGTGGATCAGACCCTGAAAACGCCCACTG
GAGGGGGTATCGATGGTGTCGGGGCGCAATCACCCACCCAGCCGGGGAAC
CCTACCATCACGCCGAGAATGCTCCAACTGGGGATACAGATCCTACAAAA
CCTGCCGGATGAACGAACATGTAACTTACTTTTCGTTCATCCGATGGCTT
TGATGGATGCCTGTTTCCGACCAGCTTATCGAGTCGCGTCTGATAAGATG
TGGGATGAGTATCGAGACGTGCTCCGGCTGCGGAACAGCGAGCACCTACA
GTTTGTTGCGAAGCGGTTTTCAGAGTGCAGTCTAACGCCTTTACCGGCTG
TACAAGATCCACACCGCTGGATCGAGTCTTTCTCGGGAAAGAGAACTCGT
TGGGAGCTTCTAGGATCCTTGTTCACTTTTTGGTCGTCTGCAGCCTCACA
GTTGCCGGTACAGCACGATATCATCACCCAGTACTGTCAGCAACATGCGT
TCAAGAGACCCAAAGACCTTATGGTGCATCTGAAACGGTGTGCGTCCATG
TGCATTGAGCTGTGTAGTCAGCTGGGTGCAATTAATATTCTTTTTGTCAA
TTTGGCGTTCAAACATAACATCCTCGAGAGCATTGCCAGTGGTGATAAGA
GCCTTTCTTGCTGGCGCCAACATGGCGATGTAATTGCAGTGACGACATCA
ATCGGGCTTCACCGGGAATTATCATCTAATTGGAACGAGGTTTCATTCCA
GCACGAACTCAAGCGACGAGTCTACGCATCGATTTACAATTTCGACAAGG
TCATCTCCACATTTACCGGCAGACCACCGCTCCTGAACAGAAAGTACTCG
ACGACCAAGCTGCCGCTGGACATTGACGACGAGGATATATTCTCCGGCAG
AATTGGCGATGCCGTGGCAAAGCTCAACTCAAATGGTTGGGACAGCAGCG
AAGACCGACAGCCGTATCCTGCCACCATCTTGCGGGCGCGAGCAATGCTA
GCAAGGAACCGCGAAGAGATGCTAGAAGTTTTAGAGACTTCGCAGGATAG
CATCACAGATGCTGCAGTTCAAACATGCCTCCACCTCAAAGCACAAGCTA
CAGACATCTACGCACAATTCCCCGAAGTCATCAAGTTTAAAGCAGAACAC
GTCCACGACCGCGACATGCCCGGCCAGCTGCTCGCTTTGCGTGTCCTTGT
GCGCTTGGATTTTCTGCTCAACCTGTTCATCTTAGAGCGACTACTGACCC
GACACAGGGTGGTTGACGAGCAGGCGCTAATCCAGGTTAGCCATGAAATG
CCCCCTTTAAATAGATACACCTCATCAATACTGACGCGACATGCTCAGGC
TATGTCCTACGCCGTCCCAGGCAGCGGTATTCTCTGCCTTGAGCTGCTCC
GCCAATCGAGCTCTCCCGAAACGTACACCTTAGAACTTCCCCGATCGGAC
ATCATCCAGGACCTCAGTGTACTGGTCGCCTTTCTCGACTGGCTCCGCCC
CTCGGAATCCGACATCGCAGCCAAGGCGCAAATCAAGGGAATATTGCAAC
GCTCATTGGACCGAATCCTCAGCATGCCGGCATCGCTGCACAGTCCGACG
AGAGCCCTGGACGCGCTGCCCGACTTTGTAGGCGCAGATCCCCATCTCGA
CTTGTTAAACACATTCGCGTGGATGCCCGCTCTCAGGCGGAAGAATGGCC
GAGAGCCAGCTTGTGAGGCATGCCGCCGACGCAAACTGGCCTGCGACCAC
GAAACCCCCGCCTGCCAGCGGTGTCGGAGACTATCCTTGAAATGCGTCTA
TCTTGCCAATCCACTCACCAAAGGCAGAGCGAGAAGCCTGCCTGAGGCTG
ACTCGCCGACTGTCTTGAGCAATGAGAGCGAGGGTGTCCCAAGTACCAAA
ACCTGCCCGGGAGCCCAGTCAACCACGCCCATCCTCGAAAGCTCAGCCGA
GTACCTGGGGCCCACGAGTTTTTCATCTGTATTTGTAGAACATCGGGATC
GATTCGAAGTGGATCAGACCCTGAAAACGCCCACTGGAGGGGGTATCGAT
GGTGTCGGGGCGCAATCACCCACCCAGCCGGGGAACCCTACCATCACGCC
GAGAATGCTCCAACTGGGGATACAGATCCTACAAAACCTGCCGGATGAAC
GAACATGTAACTTACTTTTCGTTCATCCGATGGCTTTGATGGATGCCTGT
TTCCGACCAGCTTATCGAGTCGCGTCTGATAAGATGTGGGATGAGTATCG
AGACGTGCTCCGGCTGCGGAACAGCGAGCACCTACAGTTTGTTGCGAAGC
GGTTTTCAGAGTGCAGTCTAACGCCTTTACCGGCTGTACAAGATCCACAC
CGCTGGATCGAGTCTTTCTCGGGAAAGAGAACTCGTTGGGAGCTTCTAGG
ATCCTTGTTCACTTTTTGGTCGTCTGCAGCCTCACAGTTGCCGGTACAGC
ACGATATCATCACCCAGTACTGTCAGCAACATGCGTTCAAGAGACCCAAA
GACCTTATGGTGCATCTGAAACGGTGTGCGTCCATGTGCATTGAGCTGTG
TAGTCAGCTGGGTGCAATTAATATTCTTTTTGTCAATTTGGCGTTCAAAC
ATAACATCCTCGAGAGCATTGCCAGTGGTGATAAGAGCCTTTCTTGCTGG
CGCCAACATGGCGATGTAATTGCAGTGACGACATCAATCGGGCTTCACCG
GGAATTATCATCTAATTGGAACGAGGTTTCATTCCAGCACGAACTCAAGC
GACGAGTCTACGCATCGATTTACAATTTCGACAAGGTCATCTCCACATTT
ACCGGCAGACCACCGCTCCTGAACAGAAAGTACTCGACGACCAAGCTGCC
GCTGGACATTGACGACGAGGATATATTCTCCGGCAGAATTGGCGATGCCG
TGGCAAAGCTCAACTCAAATGGTTGGGACAGCAGCGAAGACCGACAGCCG
TATCCTGCCACCATCTTGCGGGCGCGAGCAATGCTAGCAAGGAACCGCGA
AGAGATGCTAGAAGTTTTAGAGACTTCGCAGGATAGCATCACAGATGCTG
CAGTTCAAACATGCCTCCACCTCAAAGCACAAGCTACAGACATCTACGCA
CAATTCCCCGAAGTCATCAAGTTTAAAGCAGAACACGTCCACGACCGCGA
CATGCCCGGCCAGCTGCTCGCTTTGCGTGTCCTTGTGCGCTTGGATTTTC
TGCTCAACCTGTTCATCTTAGAGCGACTACTGACCCGACACAGGGTGGTT
GACGAGCAGGCGCTAATCCAGGTTAGCCATGAAATGCCCCCTTTAAATAG
ATACACCTCATCAATACTGACGCGACATGCTCAGGCTATGTCCTACGCCG
TCCCAGGCAGCGGTATTCTCTGCCTTGAGCTGCTCCGCCAATCGAGCTCT
CCCGAAACGTACACCTTAGAACTTCCCCGATCGGACATCATCCAGGACCT
CAGTGTACTGGTCGCCTTTCTCGACTGGCTCCGCCCCTCGGAATCCGACA
TCGCAGCCAAGGCGCAAATCAAGGGAATATTGCAACGCTCATTGGACCGA
ATCCTCAGCATGCCGGCATCGCTGCACAGTCCGACGAGAGCCCTGGACGC
GCTGCCCGACTTTGTAGGCGCAGATCCCCATCTCGACTTGTTAAACACAT
TCGCGTGGATGCCCGCTCTCAGGCGGAAGAATGGCCGAGAGCCAGCTTGT
GAGGCATGCCGCCGACGCAAACTGGCCTGCGACCACGAAACCCCCGCCTG
CCAGCGGTGTCGGAGACTATCCTTGAAATGCGTCTATCTTGCCAATCCAC
TCACCAAAGGCAGAGCGAGAAGCCTGCCTGAGGCTGACTCGCCGACTGTC
TTGAGCAATGAGAGCGAGGGTGTCCCAAGTACCAAAACCTGCCCGGGAGC
CCAGTCAACCACGCCCATCCTCGAAAGCTCAGCCGAGTACCTGGGGCCCA
CGAGTTTTTCATCTGTATTTGTAGAACATCGGGATCGATTCGAAGTGGAT
CAGACCCTGAAAACGCCCACTGGAGGGGGTATCGATGGTGTCGGGGCGCA
ATCACCCACCCAGCCGGGGAACCCTACCATCACGCCGAGAATGCTCCAAC
TGGGGATACAGATCCTACAAAACCTGCCGGATGAACGAACATGTAACTTA
CTTTTCGTTCATCCGATGGCTTTGATGGATGCCTGTTTCCGACCAGCTTA
TCGAGTCGCGTCTGATAAGATGTGGGATGAGTATCGAGACGTGCTCCGGC
TGCGGAACAGCGAGCACCTACAGTTTGTTGCGAAGCGGTTTTCAGAGTGC
AGTCTAACGCCTTTACCGGCTGTACAAGATCCACACCGCTGGATCGAGTC
TTTCTCGGGAAAGAGAACTCGTTGGGAGCTTCTAGGATCCTTGTTCACTT
TTTGGTCGTCTGCAGCCTCACAGTTGCCGGTACAGCACGATATCATCACC
CAGTACTGTCAGCAACATGCGTTCAAGAGACCCAAAGACCTTATGGTGCA
TCTGAAACGGTGTGCGTCCATGTGCATTGAGCTGTGTAGTCAGCTGGGTG
CAATTAATATTCTTTTTGTCAATTTGGCGTTCAAACATAACATCCTCGAG
AGCATTGCCAGTGGTGATAAGAGCCTTTCTTGCTGGCGCCAACATGGCGA
TGTAATTGCAGTGACGACATCAATCGGGCTTCACCGGGAATTATCATCTA
ATTGGAACGAGGTTTCATTCCAGCACGAACTCAAGCGACGAGTCTACGCA
TCGATTTACAATTTCGACAAGGTCATCTCCACATTTACCGGCAGACCACC
GCTCCTGAACAGAAAGTACTCGACGACCAAGCTGCCGCTGGACATTGACG
ACGAGGATATATTCTCCGGCAGAATTGGCGATGCCGTGGCAAAGCTCAAC
TCAAATGGTTGGGACAGCAGCGAAGACCGACAGCCGTATCCTGCCACCAT
CTTGCGGGCGCGAGCAATGCTAGCAAGGAACCGCGAAGAGATGCTAGAAG
TTTTAGAGACTTCGCAGGATAGCATCACAGATGCTGCAGTTCAAACATGC
CTCCACCTCAAAGCACAAGCTACAGACATCTACGCACAATTCCCCGAAGT
CATCAAGTTTAAAGCAGAACACGTCCACGACCGCGACATGCCCGGCCAGC
TGCTCGCTTTGCGTGTCCTTGTGCGCTTGGATTTTCTGCTCAACCTGTTC
ATCTTAGAGCGACTACTGACCCGACACAGGGTGGTTGACGAGCAGGCGCT
AATCCAGGTTAGCCATGAAATGCCCCCTTTAAATAGATACACCTCATCAA
TACTGACGCGACATGCTCAGGCTATGTCCTACGCCGTCCCAGGCAGCGGT
ATTCTCTGCCTTGAGCTGCTCCGCCAATCGAGCTCTCCCGAAACGTACAC
CTTAGAACTTCCCCGATCGGACATCATCCAGGACCTCAGTGTACTGGTCG
CCTTTCTCGACTGGCTCCGCCCCTCGGAATCCGACATCGCAGCCAAGGCG
CAAATCAAGGGAATATTGCAACGCTCATTGGACCGAATCCTCAGCATGCC
GGCATCGCTGCACAGTCCGACGAGAGCCCTGGACGCGCTGCCCGACTTTG
TAGGCGCAGATCCCCATCTCGACTTGTTAAACACATTCGCGTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000008.1 | supercontig | ACJE01000008.1:1137024..1139200 + |
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